Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400054407 | Potato | nucleus | 91.94 | 90.76 |
| GSMUA_Achr10P... | Banana | cytosol | 44.52 | 51.69 |
| GSMUA_Achr7P00860_001 | Banana | nucleus | 42.26 | 50.0 |
| GSMUA_Achr4P23030_001 | Banana | nucleus | 39.35 | 48.8 |
| GSMUA_Achr9P10040_001 | Banana | nucleus | 47.74 | 48.68 |
| GSMUA_Achr4P32010_001 | Banana | nucleus | 43.87 | 47.39 |
| Solyc05g021090.2.1 | Tomato | nucleus | 42.58 | 47.31 |
| Zm00001d007850_P001 | Maize | nucleus | 37.74 | 46.61 |
| GSMUA_Achr5P02170_001 | Banana | nucleus | 45.48 | 45.93 |
| Solyc07g045030.2.1 | Tomato | nucleus | 48.39 | 45.32 |
| HORVU5Hr1G099470.2 | Barley | cytosol | 45.48 | 41.84 |
| TraesCS5A01G411900.1 | Wheat | nucleus | 45.81 | 41.4 |
| TraesCS5D01G421100.1 | Wheat | nucleus | 45.16 | 41.06 |
| Zm00001d013151_P001 | Maize | cytosol | 43.87 | 40.48 |
| EES17466 | Sorghum | nucleus | 39.68 | 40.46 |
| Os03t0777000-01 | Rice | nucleus | 47.1 | 40.33 |
| TraesCS5B01G415700.1 | Wheat | nucleus | 45.48 | 40.29 |
| Zm00001d031164_P001 | Maize | nucleus | 39.68 | 40.2 |
| TraesCS4B01G384700.1 | Wheat | cytoskeleton, cytosol, nucleus | 43.87 | 40.0 |
| EER95852 | Sorghum | nucleus | 44.19 | 39.94 |
| HORVU5Hr1G099390.2 | Barley | nucleus | 36.77 | 39.45 |
| HORVU5Hr1G099460.1 | Barley | nucleus | 43.87 | 39.31 |
| TraesCS5B01G415600.1 | Wheat | nucleus | 44.19 | 39.03 |
| TraesCS5D01G420800.1 | Wheat | nucleus | 45.81 | 39.01 |
| Zm00001d018773_P001 | Maize | nucleus | 44.84 | 38.83 |
| EER93360 | Sorghum | nucleus | 45.81 | 38.38 |
| TraesCS5A01G411800.1 | Wheat | nucleus | 43.55 | 38.35 |
| Zm00001d034277_P001 | Maize | cytosol, mitochondrion, nucleus | 45.16 | 38.04 |
| TraesCS5A01G411700.1 | Wheat | nucleus | 46.13 | 37.93 |
| TraesCS5B01G415400.1 | Wheat | nucleus | 46.13 | 37.93 |
| TraesCS5D01G421000.1 | Wheat | nucleus | 45.16 | 36.46 |
| Solyc02g061780.2.1 | Tomato | nucleus | 26.13 | 33.2 |
| Solyc04g005610.2.1 | Tomato | nucleus | 28.06 | 31.64 |
| Solyc02g087920.2.1 | Tomato | nucleus | 39.03 | 31.59 |
| Solyc11g017470.1.1 | Tomato | nucleus | 29.35 | 31.27 |
| Solyc06g060230.2.1 | Tomato | nucleus | 28.71 | 30.07 |
| Solyc05g007770.2.1 | Tomato | nucleus | 27.1 | 29.79 |
| Solyc05g007550.1.1 | Tomato | nucleus | 37.42 | 29.74 |
| Solyc10g055760.1.1 | Tomato | cytosol | 26.13 | 28.62 |
| Solyc04g009440.2.1 | Tomato | nucleus | 27.42 | 28.24 |
| Solyc07g063420.2.1 | Tomato | nucleus | 28.71 | 27.05 |
| Solyc12g013620.1.1 | Tomato | nucleus | 30.32 | 26.93 |
| Solyc07g063410.2.1 | Tomato | nucleus | 30.32 | 26.4 |
| Solyc10g083450.1.1 | Tomato | cytosol | 24.52 | 26.3 |
| Solyc11g065540.1.1 | Tomato | nucleus | 25.16 | 25.24 |
| Solyc10g006880.2.1 | Tomato | nucleus | 28.06 | 24.51 |
| Solyc01g102740.2.1 | Tomato | nucleus | 31.61 | 23.73 |
| Solyc07g006840.1.1 | Tomato | nucleus | 28.06 | 18.01 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR003441 |
| InterPro:IPR036093 | UniProt:K4B7X8 | InterPro:NAC-dom | InterPro:NAC_dom_sf | PFAM:PF02365 | PFscan:PS51005 |
| PANTHER:PTHR44543 | PANTHER:PTHR44543:SF2 | SUPFAM:SSF101941 | EnsemblPlantsGene:Solyc02g069960.2 | EnsemblPlants:Solyc02g069960.2.1 | UniParc:UPI0002768481 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr2:-:39737769..39741018
Molecular Weight (calculated)
35725.7 Da
IEP (calculated)
6.270
GRAVY (calculated)
-0.795
Length
310 amino acids
Sequence
(BLAST)
(BLAST)
001: MEVEKISSIV TNNYYEDEDE DEDDDDDDVV LPGFRFHPTD EELVGFYLRR KIEKKIIGLE IIKQIDIYKY DPWDLPKGSN NNGEKEWYFF CKRGRKYKNS
101: LRPNRVTGGS GFWKATGIDR PIYSSGKCIG LKKSLVYYRG SAGKGTKTEW QMHEFRLPVE NDKSTKHLHA NTIPQQDETW TLCRILKRNV SYKKPIPDWK
201: EVAKKQRNNS VMNMDVLSSK ICSNSSIESS PNSSQIFISF STTSVVKQNT YTNTITENKH QFVSQQSSGT SSQSTTVGAA STPLDFNEWL EHGNWDELES
301: IFELSFDPLF
101: LRPNRVTGGS GFWKATGIDR PIYSSGKCIG LKKSLVYYRG SAGKGTKTEW QMHEFRLPVE NDKSTKHLHA NTIPQQDETW TLCRILKRNV SYKKPIPDWK
201: EVAKKQRNNS VMNMDVLSSK ICSNSSIESS PNSSQIFISF STTSVVKQNT YTNTITENKH QFVSQQSSGT SSQSTTVGAA STPLDFNEWL EHGNWDELES
301: IFELSFDPLF
001: MSGEGNLGKD HEEENEAPLP GFRFHPTDEE LLGYYLRRKV ENKTIKLELI KQIDIYKYDP WDLPRVSSVG EKEWYFFCMR GRKYRNSVRP NRVTGSGFWK
101: ATGIDKPVYS NLDCVGLKKS LVYYLGSAGK GTKTDWMMHE FRLPSTTKTD SPAQQAEVWT LCRIFKRVTS QRNPTILPPN RKPVITLTDT CSKTSSLDSD
201: HTSHRTVDSM SHEPPLPQPQ NPYWNQHIVG FNQPTYTGND NNLLMSFWNG NGGDFIGDSA SWDELRSVID GNTKP
101: ATGIDKPVYS NLDCVGLKKS LVYYLGSAGK GTKTDWMMHE FRLPSTTKTD SPAQQAEVWT LCRIFKRVTS QRNPTILPPN RKPVITLTDT CSKTSSLDSD
201: HTSHRTVDSM SHEPPLPQPQ NPYWNQHIVG FNQPTYTGND NNLLMSFWNG NGGDFIGDSA SWDELRSVID GNTKP
Arabidopsis Description
JUB1Transcription factor JUNGBRUNNEN 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SK55]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.