Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU5Hr1G099470.2 | Barley | cytosol | 83.24 | 85.46 |
| HORVU5Hr1G099390.2 | Barley | nucleus | 54.34 | 65.05 |
| Os03t0777000-01 | Rice | nucleus | 65.32 | 62.43 |
| Zm00001d007850_P001 | Maize | nucleus | 41.62 | 57.37 |
| EER95852 | Sorghum | nucleus | 54.05 | 54.52 |
| Zm00001d018773_P001 | Maize | nucleus | 52.02 | 50.28 |
| VIT_19s0027g00880.t01 | Wine grape | nucleus | 30.64 | 49.53 |
| GSMUA_Achr7P00860_001 | Banana | nucleus | 37.28 | 49.24 |
| GSMUA_Achr5P02170_001 | Banana | nucleus | 43.35 | 48.86 |
| VIT_19s0027g00870.t01 | Wine grape | nucleus | 39.02 | 48.74 |
| VIT_12s0028g00860.t01 | Wine grape | nucleus | 41.91 | 48.66 |
| GSMUA_Achr4P23030_001 | Banana | nucleus | 34.68 | 48.0 |
| VIT_19s0027g00860.t01 | Wine grape | nucleus | 38.15 | 47.83 |
| VIT_19s0027g00840.t01 | Wine grape | nucleus | 37.57 | 45.77 |
| AT2G43000.1 | Thale cress | nucleus | 35.55 | 44.73 |
| PGSC0003DMT400090327 | Potato | cytosol | 36.71 | 44.72 |
| KRH73618 | Soybean | cytosol | 41.33 | 44.69 |
| PGSC0003DMT400054407 | Potato | nucleus | 40.46 | 44.59 |
| Bra000282.1-P | Field mustard | nucleus | 34.97 | 44.49 |
| KRH14512 | Soybean | nucleus | 41.91 | 44.48 |
| Solyc05g021090.2.1 | Tomato | nucleus | 35.55 | 44.09 |
| CDX82569 | Canola | nucleus | 38.44 | 44.04 |
| CDY64562 | Canola | nucleus | 37.28 | 43.88 |
| Solyc02g069960.2.1 | Tomato | nucleus | 39.31 | 43.87 |
| VIT_19s0027g00910.t01 | Wine grape | cytoskeleton, cytosol, nucleus | 37.28 | 43.73 |
| PGSC0003DMT400003082 | Potato | nucleus | 35.55 | 43.62 |
| CDY43391 | Canola | nucleus | 36.99 | 43.39 |
| CDY55499 | Canola | nucleus | 34.97 | 43.37 |
| CDY53654 | Canola | nucleus | 34.97 | 43.37 |
| CDY24238 | Canola | nucleus | 38.44 | 43.32 |
| Bra004736.1-P | Field mustard | nucleus | 34.97 | 43.21 |
| KRH46012 | Soybean | nucleus | 37.86 | 43.09 |
| KRG98971 | Soybean | nucleus | 37.86 | 43.09 |
| Bra039353.1-P | Field mustard | nucleus | 38.15 | 43.0 |
| AT3G12910.1 | Thale cress | nucleus | 37.57 | 42.9 |
| KRH13702 | Soybean | nucleus | 39.31 | 42.77 |
| CDY30373 | Canola | nucleus | 34.1 | 42.6 |
| Bra037743.1-P | Field mustard | nucleus | 34.1 | 42.6 |
| HORVU6Hr1G075830.1 | Barley | nucleus | 32.08 | 42.53 |
| Solyc07g045030.2.1 | Tomato | nucleus | 40.17 | 41.99 |
| CDY60122 | Canola | nucleus | 39.6 | 41.9 |
| CDY14865 | Canola | nucleus | 33.53 | 41.88 |
| HORVU3Hr1G094170.1 | Barley | nucleus | 15.32 | 41.73 |
| Bra034719.1-P | Field mustard | nucleus | 39.31 | 41.59 |
| HORVU1Hr1G021800.3 | Barley | cytosol, nucleus | 21.39 | 40.22 |
| PGSC0003DMT400049124 | Potato | nucleus | 28.61 | 39.6 |
| HORVU3Hr1G032680.1 | Barley | nucleus | 21.68 | 36.41 |
| CDY23551 | Canola | nucleus | 39.31 | 36.27 |
| HORVU4Hr1G089660.1 | Barley | cytosol, nucleus | 22.25 | 33.92 |
| HORVU2Hr1G011390.1 | Barley | nucleus | 31.5 | 30.11 |
| HORVU2Hr1G011360.1 | Barley | nucleus | 31.5 | 30.11 |
| HORVU2Hr1G011370.1 | Barley | nucleus | 32.66 | 29.2 |
| HORVU2Hr1G004130.1 | Barley | cytosol, nucleus | 23.41 | 28.93 |
| HORVU1Hr1G063740.1 | Barley | nucleus | 22.54 | 26.62 |
| HORVU5Hr1G111590.2 | Barley | nucleus | 24.57 | 25.76 |
| HORVU4Hr1G051290.1 | Barley | nucleus | 25.43 | 24.79 |
| HORVU4Hr1G081440.3 | Barley | nucleus | 26.88 | 24.47 |
| HORVU1Hr1G064300.1 | Barley | nucleus | 27.75 | 24.43 |
| HORVU4Hr1G017430.7 | Barley | nucleus | 23.41 | 24.4 |
| HORVU4Hr1G081430.1 | Barley | cytosol, nucleus | 26.01 | 24.32 |
| HORVU4Hr1G081450.1 | Barley | nucleus | 24.57 | 23.88 |
| CDY42810 | Canola | nucleus | 34.97 | 23.73 |
| CDX83510 | Canola | nucleus | 34.68 | 23.53 |
| HORVU3Hr1G014140.3 | Barley | nucleus | 23.7 | 23.5 |
| HORVU7Hr1G076250.1 | Barley | nucleus | 26.01 | 23.02 |
| HORVU3Hr1G090440.4 | Barley | cytosol, nucleus, peroxisome | 27.17 | 22.93 |
| HORVU2Hr1G039640.2 | Barley | nucleus | 25.43 | 21.73 |
| HORVU6Hr1G019380.2 | Barley | plastid | 25.43 | 21.46 |
| HORVU2Hr1G017470.1 | Barley | nucleus | 23.7 | 21.3 |
| HORVU5Hr1G045650.7 | Barley | plastid | 23.41 | 19.8 |
| HORVU0Hr1G026330.2 | Barley | nucleus | 21.68 | 18.03 |
| HORVU2Hr1G017460.4 | Barley | nucleus | 21.68 | 17.86 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | UniProt:A0A287SH77 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| EnsemblPlantsGene:HORVU5Hr1G099460 | EnsemblPlants:HORVU5Hr1G099460.1 | InterPro:IPR003441 | InterPro:IPR036093 | InterPro:NAC-dom | InterPro:NAC_dom_sf |
| PFAM:PF02365 | PFscan:PS51005 | PANTHER:PTHR44543 | PANTHER:PTHR44543:SF3 | SUPFAM:SSF101941 | UniParc:UPI000B460C89 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chrchr5H:+:610277554..610279254
Molecular Weight (calculated)
38941.6 Da
IEP (calculated)
6.522
GRAVY (calculated)
-0.646
Length
346 amino acids
Sequence
(BLAST)
(BLAST)
001: MVAKAKMSAM ELEMEKATSD GEVVLGGAGD EEEEEDVVLP GYRFHPTDEE LVTFYLRRKV ARKSLRIEVI REMDIYKHDP WDLPKASTVG GEKEWYFFCL
101: RGRKYRNSIR PNRVTGSGFW KATGIDRPIY GSGSGVSIGL KKSLVYYRGS AGKGTKTDWM MHEFRLPPAE AAATNSSPSM QEAVSRPRRR IFRRTITYRK
201: QQQPWRPAPA VSAADSSSNT GSFESSEVSD EYMNCLQAPA AAAPFIHQQH QYVTQTGTVD SGNEFFYSDT MQHQQFQGQW NAAPAAPVPE QKPQNPPSTA
301: VTFHQNDHSL AVAANDFDKV EAYLEEIARL MEVTDPAGFY DFRSYC
101: RGRKYRNSIR PNRVTGSGFW KATGIDRPIY GSGSGVSIGL KKSLVYYRGS AGKGTKTDWM MHEFRLPPAE AAATNSSPSM QEAVSRPRRR IFRRTITYRK
201: QQQPWRPAPA VSAADSSSNT GSFESSEVSD EYMNCLQAPA AAAPFIHQQH QYVTQTGTVD SGNEFFYSDT MQHQQFQGQW NAAPAAPVPE QKPQNPPSTA
301: VTFHQNDHSL AVAANDFDKV EAYLEEIARL MEVTDPAGFY DFRSYC
001: MGDRNNDGDQ KMEDVLLPGF RFHPTDEELV SFYLKRKVQH NPLSIELIRQ LDIYKYDPWD LPKFAMTGEK EWYFYCPRDR KYRNSSRPNR VTGAGFWKAT
101: GTDRPIYSSE GNKCIGLKKS LVFYKGRAAK GVKTDWMMHE FRLPSLSEPS PPSKRFFDSP VSPNDSWAIC RIFKKTNTTT LRALSHSFVS SLPPETSTDT
201: MSNQKQSNTY HFSSDKILKP SSHFQFHHEN MNTPKTSNST TPSVPTISPF SYLDFTSYDK PTNVFNPVSC LDQQYLTNLF LATQETQPQF PRLPSSNEIP
301: SFLLNTSSDS TFLGEFTSHI DLSAVLAQEQ CPPLVSLPQE YQETGFEGNG IMKNMRGSNE DHLGDHCDTL RFDDFTSTIN ENHRHHQDLK QNMTLLESYY
401: SSLSSINSDL PACFSSTT
101: GTDRPIYSSE GNKCIGLKKS LVFYKGRAAK GVKTDWMMHE FRLPSLSEPS PPSKRFFDSP VSPNDSWAIC RIFKKTNTTT LRALSHSFVS SLPPETSTDT
201: MSNQKQSNTY HFSSDKILKP SSHFQFHHEN MNTPKTSNST TPSVPTISPF SYLDFTSYDK PTNVFNPVSC LDQQYLTNLF LATQETQPQF PRLPSSNEIP
301: SFLLNTSSDS TFLGEFTSHI DLSAVLAQEQ CPPLVSLPQE YQETGFEGNG IMKNMRGSNE DHLGDHCDTL RFDDFTSTIN ENHRHHQDLK QNMTLLESYY
401: SSLSSINSDL PACFSSTT
Arabidopsis Description
FEZProtein FEZ [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVH0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.