Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5A01G468300.1 | Wheat | nucleus | 96.06 | 96.94 |
| TraesCS5B01G480900.2 | Wheat | nucleus | 95.45 | 96.33 |
| TraesCS5D01G481200.1 | Wheat | nucleus | 94.55 | 96.0 |
| EER93215 | Sorghum | nucleus | 74.85 | 77.43 |
| Zm00001d034601_P001 | Maize | nucleus | 73.03 | 77.24 |
| Os03t0815100-01 | Rice | nucleus | 73.03 | 76.27 |
| HORVU3Hr1G094170.1 | Barley | nucleus | 27.58 | 71.65 |
| Zm00001d013003_P001 | Maize | nucleus, plastid | 69.7 | 62.67 |
| GSMUA_Achr4P02390_001 | Banana | nucleus | 48.18 | 60.23 |
| GSMUA_Achr5P07590_001 | Banana | nucleus | 51.21 | 58.28 |
| GSMUA_Achr7P21780_001 | Banana | nucleus | 52.12 | 57.72 |
| HORVU4Hr1G089660.1 | Barley | cytosol, nucleus | 39.39 | 57.27 |
| GSMUA_Achr4P10310_001 | Banana | nucleus | 50.0 | 56.31 |
| VIT_06s0004g00020.t01 | Wine grape | nucleus | 50.0 | 55.56 |
| HORVU2Hr1G004130.1 | Barley | cytosol, nucleus | 46.36 | 54.64 |
| GSMUA_Achr10P... | Banana | cytosol | 47.58 | 51.64 |
| HORVU1Hr1G021800.3 | Barley | cytosol, nucleus | 28.48 | 51.09 |
| HORVU3Hr1G032680.1 | Barley | nucleus | 31.82 | 50.97 |
| GSMUA_Achr6P32330_001 | Banana | cytosol | 40.91 | 50.0 |
| HORVU1Hr1G063740.1 | Barley | nucleus | 39.39 | 44.37 |
| HORVU4Hr1G017430.7 | Barley | nucleus | 37.27 | 37.05 |
| HORVU4Hr1G051290.1 | Barley | nucleus | 36.97 | 34.37 |
| HORVU3Hr1G014140.3 | Barley | nucleus | 35.15 | 33.24 |
| HORVU6Hr1G075830.1 | Barley | nucleus | 26.06 | 32.95 |
| HORVU2Hr1G039640.2 | Barley | nucleus | 36.97 | 30.12 |
| HORVU2Hr1G017470.1 | Barley | nucleus | 34.24 | 29.35 |
| HORVU6Hr1G019380.2 | Barley | plastid | 35.76 | 28.78 |
| HORVU5Hr1G045650.7 | Barley | plastid | 34.24 | 27.63 |
| HORVU5Hr1G099390.2 | Barley | nucleus | 22.73 | 25.95 |
| HORVU5Hr1G099470.2 | Barley | cytosol | 26.06 | 25.52 |
| HORVU5Hr1G099460.1 | Barley | nucleus | 25.76 | 24.57 |
| HORVU0Hr1G026330.2 | Barley | nucleus | 30.91 | 24.52 |
| HORVU2Hr1G017460.4 | Barley | nucleus | 30.91 | 24.29 |
| HORVU4Hr1G081450.1 | Barley | nucleus | 25.76 | 23.88 |
| HORVU4Hr1G081430.1 | Barley | cytosol, nucleus | 26.36 | 23.51 |
| HORVU4Hr1G081440.3 | Barley | nucleus | 26.67 | 23.16 |
| HORVU1Hr1G064300.1 | Barley | nucleus | 27.58 | 23.16 |
| HORVU7Hr1G076250.1 | Barley | nucleus | 26.97 | 22.76 |
| HORVU2Hr1G011390.1 | Barley | nucleus | 24.55 | 22.38 |
| HORVU2Hr1G011360.1 | Barley | nucleus | 24.55 | 22.38 |
| HORVU3Hr1G090440.4 | Barley | cytosol, nucleus, peroxisome | 26.67 | 21.46 |
| HORVU2Hr1G011370.1 | Barley | nucleus | 24.85 | 21.19 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | ProteinID:AEG21060.1 | UniProt:F6MEL2 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | EnsemblPlantsGene:HORVU5Hr1G111590 | EnsemblPlants:HORVU5Hr1G111590.2 | InterPro:IPR003441 | InterPro:IPR036093 | InterPro:NAC-dom |
| InterPro:NAC_dom_sf | PFAM:PF02365 | PFscan:PS51005 | PANTHER:PTHR31719 | PANTHER:PTHR31719:SF80 | SUPFAM:SSF101941 |
| UniParc:UPI0002118D2E | SEG:seg | : | : | : | : |
Description
Stress-induced transcription factor SNAC1 [Source:UniProtKB/TrEMBL;Acc:F6MEL2]
Coordinates
chrchr5H:+:636772274..636774317
Molecular Weight (calculated)
36944.5 Da
IEP (calculated)
6.803
GRAVY (calculated)
-0.720
Length
330 amino acids
Sequence
(BLAST)
(BLAST)
001: MGMPAARRRE RDAEAELNLP PGFRFHPTDD ELVEHYLCRK AAGQRLPVPI IAEVDLYRFD PWALPDRALF GTREWYFFTP RDRKYPNGSR PNRAAGNGYW
101: KATGADKPVA PRGGRTMGIK KALVFYAGKA PKGVKTDWIM HEYRLADAGR AAASKKGSLR LDDWVLCRLY NKKNEWEKMQ LQQQQGEGET MMEPKAEENT
201: ASDMVVTSHS HSQSQSHSHS WGEARTPESE IVDNDPSLFH QAQATAFQTQ SPAAAAAHQE MMATLMVPKK EAADEGRNDL FVDLSYDDIQ SMYNGLDMMP
301: PGDDLLYSSF FASPRVRGSQ PGSGGMPAPF
101: KATGADKPVA PRGGRTMGIK KALVFYAGKA PKGVKTDWIM HEYRLADAGR AAASKKGSLR LDDWVLCRLY NKKNEWEKMQ LQQQQGEGET MMEPKAEENT
201: ASDMVVTSHS HSQSQSHSHS WGEARTPESE IVDNDPSLFH QAQATAFQTQ SPAAAAAHQE MMATLMVPKK EAADEGRNDL FVDLSYDDIQ SMYNGLDMMP
301: PGDDLLYSSF FASPRVRGSQ PGSGGMPAPF
001: MKSELNLPAG FRFHPTDEEL VKFYLCRKCA SEQISAPVIA EIDLYKFNPW ELPEMSLYGE KEWYFFSPRD RKYPNGSRPN RAAGTGYWKA TGADKPIGKP
101: KTLGIKKALV FYAGKAPKGI KTNWIMHEYR LANVDRSASV NKKNNLRLDD WVLCRIYNKK GTMEKYFPAD EKPRTTTMAE QSSSPFDTSD STYPTLQEDD
201: SSSSGGHGHV VSPDVLEVQS EPKWGELEDA LEAFDTSMFG SSMELLQPDA FVPQFLYQSD YFTSFQDPPE QKPFLNWSFA PQG
101: KTLGIKKALV FYAGKAPKGI KTNWIMHEYR LANVDRSASV NKKNNLRLDD WVLCRIYNKK GTMEKYFPAD EKPRTTTMAE QSSSPFDTSD STYPTLQEDD
201: SSSSGGHGHV VSPDVLEVQS EPKWGELEDA LEAFDTSMFG SSMELLQPDA FVPQFLYQSD YFTSFQDPPE QKPFLNWSFA PQG
Arabidopsis Description
NAC081Protein ATAF2 [Source:UniProtKB/Swiss-Prot;Acc:Q9C598]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.