Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr4P02390_001 | Banana | nucleus | 61.18 | 70.45 |
| GSMUA_Achr7P21780_001 | Banana | nucleus | 65.46 | 66.78 |
| GSMUA_Achr4P10310_001 | Banana | nucleus | 60.2 | 62.46 |
| HORVU3Hr1G094170.1 | Barley | nucleus | 25.99 | 62.2 |
| GSMUA_Achr5P07590_001 | Banana | nucleus | 54.61 | 57.24 |
| VIT_06s0004g00020.t01 | Wine grape | nucleus | 52.3 | 53.54 |
| Zm00001d012527_P001 | Maize | cytosol, mitochondrion, nucleus | 52.96 | 52.27 |
| Zm00001d034601_P001 | Maize | nucleus | 52.96 | 51.6 |
| Os03t0815100-01 | Rice | nucleus | 53.29 | 51.27 |
| Os07t0225300-01 | Rice | nucleus | 46.38 | 51.09 |
| EES03797 | Sorghum | nucleus | 52.96 | 50.95 |
| Os01t0816100-01 | Rice | nucleus | 53.29 | 50.94 |
| TraesCS3B01G371200.1 | Wheat | nucleus | 51.97 | 50.64 |
| EER93215 | Sorghum | nucleus | 52.96 | 50.47 |
| GSMUA_Achr6P32330_001 | Banana | cytosol | 44.74 | 50.37 |
| EER96087 | Sorghum | nucleus | 48.03 | 50.34 |
| TraesCS3A01G339600.1 | Wheat | nucleus | 51.97 | 50.32 |
| HORVU4Hr1G089660.1 | Barley | cytosol, nucleus | 37.5 | 50.22 |
| TraesCS6B01G075200.1 | Wheat | nucleus | 47.04 | 50.18 |
| TraesCS3D01G333100.1 | Wheat | nucleus | 51.97 | 50.0 |
| GSMUA_Achr7P21770_001 | Banana | nucleus | 32.24 | 49.0 |
| Zm00001d005208_P001 | Maize | nucleus | 48.68 | 48.84 |
| Zm00001d019207_P001 | Maize | nucleus | 48.03 | 48.67 |
| TraesCS5D01G481200.1 | Wheat | nucleus | 51.64 | 48.31 |
| TraesCS5A01G468300.1 | Wheat | nucleus | 51.64 | 48.01 |
| TraesCS5B01G480900.2 | Wheat | nucleus | 51.64 | 48.01 |
| TraesCS6A01G057400.1 | Wheat | nucleus | 45.72 | 47.93 |
| HORVU5Hr1G111590.2 | Barley | nucleus | 51.64 | 47.58 |
| GSMUA_Achr10P... | Banana | nucleus | 38.82 | 46.27 |
| GSMUA_Achr7P23250_001 | Banana | nucleus | 38.49 | 43.66 |
| GSMUA_Achr6P18720_001 | Banana | nucleus | 38.82 | 43.07 |
| GSMUA_Achr6P25380_001 | Banana | nucleus | 38.82 | 43.07 |
| HORVU2Hr1G004130.1 | Barley | cytosol, nucleus | 39.47 | 42.86 |
| Zm00001d013003_P001 | Maize | nucleus, plastid | 51.64 | 42.78 |
| GSMUA_Achr6P17720_001 | Banana | nucleus | 38.82 | 40.69 |
| TraesCS6D01G059300.1 | Wheat | nucleus, plastid | 46.38 | 39.94 |
| GSMUA_Achr10P... | Banana | nucleus | 36.18 | 36.42 |
| GSMUA_AchrUn_... | Banana | nucleus | 38.49 | 35.78 |
| GSMUA_Achr9P19520_001 | Banana | nucleus | 37.5 | 34.97 |
| GSMUA_Achr3P18990_001 | Banana | plastid | 38.16 | 34.83 |
| GSMUA_Achr4P02380_001 | Banana | nucleus | 37.83 | 34.43 |
| GSMUA_Achr6P32320_001 | Banana | nucleus | 38.49 | 33.91 |
| GSMUA_Achr1P08860_001 | Banana | nucleus | 39.8 | 33.7 |
| GSMUA_Achr5P19060_001 | Banana | nucleus | 25.0 | 31.15 |
| GSMUA_AchrUn_... | Banana | nucleus | 26.64 | 31.03 |
| GSMUA_Achr7P00860_001 | Banana | nucleus | 26.64 | 30.92 |
| GSMUA_Achr11P... | Banana | nucleus | 26.64 | 30.92 |
| GSMUA_Achr3P18010_001 | Banana | nucleus | 36.18 | 29.89 |
| GSMUA_Achr4P23030_001 | Banana | nucleus | 24.34 | 29.6 |
| GSMUA_Achr1P02710_001 | Banana | nucleus | 26.32 | 29.41 |
| GSMUA_Achr5P17060_001 | Banana | nucleus | 26.64 | 28.72 |
| GSMUA_Achr10P... | Banana | cytosol | 25.0 | 28.46 |
| GSMUA_Achr7P04030_001 | Banana | nucleus | 26.32 | 28.07 |
| GSMUA_Achr4P32010_001 | Banana | nucleus | 25.99 | 27.53 |
| GSMUA_Achr9P04960_001 | Banana | nucleus | 35.2 | 26.95 |
| GSMUA_Achr3P00560_001 | Banana | nucleus | 24.67 | 26.88 |
| GSMUA_Achr11P... | Banana | nucleus | 27.63 | 26.42 |
| GSMUA_Achr3P14720_001 | Banana | nucleus | 25.0 | 26.3 |
| GSMUA_Achr10P... | Banana | nucleus | 27.96 | 25.99 |
| GSMUA_Achr9P10040_001 | Banana | nucleus | 25.99 | 25.99 |
| GSMUA_Achr5P02170_001 | Banana | nucleus | 25.99 | 25.73 |
| GSMUA_Achr1P18110_001 | Banana | cytosol, nucleus, plastid | 18.09 | 25.35 |
| GSMUA_Achr11P... | Banana | nucleus | 27.63 | 25.07 |
| GSMUA_Achr10P... | Banana | nucleus | 27.3 | 24.48 |
| GSMUA_Achr7P23650_001 | Banana | nucleus | 27.63 | 24.14 |
| GSMUA_Achr3P21690_001 | Banana | nucleus | 27.96 | 23.88 |
| GSMUA_Achr6P02680_001 | Banana | nucleus | 28.95 | 22.86 |
| GSMUA_Achr10P... | Banana | cytosol | 27.96 | 20.14 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSMUA_Achr10G29200_001 |
| EnsemblPlants:GSMUA_Achr10P29200_001 | EnsemblPlants:GSMUA_Achr10T29200_001 | InterPro:IPR003441 | InterPro:IPR036093 | UniProt:M0RME4 | InterPro:NAC-dom |
| InterPro:NAC_dom_sf | PFAM:PF02365 | PFscan:PS51005 | PANTHER:PTHR31719 | PANTHER:PTHR31719:SF80 | SUPFAM:SSF101941 |
| UniParc:UPI0002961B06 | SEG:seg | : | : | : | : |
Description
Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr10G29200_001]
Coordinates
chr10:-:31797026..31798400
Molecular Weight (calculated)
34814.3 Da
IEP (calculated)
9.598
GRAVY (calculated)
-0.540
Length
304 amino acids
Sequence
(BLAST)
(BLAST)
001: MARNRDAEAE LNLPPGFRFH PSDEELVVHY LCRKITCQRL PVPIIAEIDL YKYNPWELPD KALFGQKEWY FFTPRDRKYP NGSRPNRSAG KGYWKATGAD
101: KPISTKGSKT TLAIKKALVF YSGKAPRGVK TDWIMHEYRV ADTGRRANKG SLRLDDWVLC RLYNKKNTWE KKQQQRATSF GEPIDSSDEA WSAADSFRTP
201: DSEIENDFVL PHFNDLGSPS QASAGDFSLR FMHYMQTLLK QLVSFADKDL QLLLIWTENI QYSISTTDSA IILSIKANST RITNFVHFNL PKKAYIGIDV
301: TIST
101: KPISTKGSKT TLAIKKALVF YSGKAPRGVK TDWIMHEYRV ADTGRRANKG SLRLDDWVLC RLYNKKNTWE KKQQQRATSF GEPIDSSDEA WSAADSFRTP
201: DSEIENDFVL PHFNDLGSPS QASAGDFSLR FMHYMQTLLK QLVSFADKDL QLLLIWTENI QYSISTTDSA IILSIKANST RITNFVHFNL PKKAYIGIDV
301: TIST
001: MSELLQLPPG FRFHPTDEEL VMHYLCRKCA SQSIAVPIIA EIDLYKYDPW ELPGLALYGE KEWYFFSPRD RKYPNGSRPN RSAGSGYWKA TGADKPIGLP
101: KPVGIKKALV FYAGKAPKGE KTNWIMHEYR LADVDRSVRK KKNSLRLDDW VLCRIYNKKG ATERRGPPPP VVYGDEIMEE KPKVTEMVMP PPPQQTSEFA
201: YFDTSDSVPK LHTTDSSCSE QVVSPEFTSE VQSEPKWKDW SAVSNDNNNT LDFGFNYIDA TVDNAFGGGG SSNQMFPLQD MFMYMQKPY
101: KPVGIKKALV FYAGKAPKGE KTNWIMHEYR LADVDRSVRK KKNSLRLDDW VLCRIYNKKG ATERRGPPPP VVYGDEIMEE KPKVTEMVMP PPPQQTSEFA
201: YFDTSDSVPK LHTTDSSCSE QVVSPEFTSE VQSEPKWKDW SAVSNDNNNT LDFGFNYIDA TVDNAFGGGG SSNQMFPLQD MFMYMQKPY
Arabidopsis Description
NAC002ATAF1 [Source:UniProtKB/TrEMBL;Acc:A0A178W8W1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.