Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES03797 | Sorghum | nucleus | 87.99 | 85.76 |
| Os01t0816100-01 | Rice | nucleus | 75.97 | 73.58 |
| TraesCS3B01G371200.1 | Wheat | nucleus | 70.78 | 69.87 |
| TraesCS3D01G333100.1 | Wheat | nucleus | 70.45 | 68.67 |
| TraesCS3A01G339600.1 | Wheat | nucleus | 69.48 | 68.15 |
| GSMUA_Achr4P02390_001 | Banana | nucleus | 53.25 | 62.12 |
| GSMUA_Achr5P07590_001 | Banana | nucleus | 57.14 | 60.69 |
| GSMUA_Achr7P21780_001 | Banana | nucleus | 56.82 | 58.72 |
| VIT_06s0004g00020.t01 | Wine grape | nucleus | 54.55 | 56.57 |
| GSMUA_Achr4P10310_001 | Banana | nucleus | 52.6 | 55.29 |
| Zm00001d034601_P001 | Maize | nucleus | 55.52 | 54.81 |
| Zm00001d019207_P001 | Maize | nucleus | 52.6 | 54.0 |
| Zm00001d005208_P001 | Maize | nucleus | 52.27 | 53.14 |
| GSMUA_Achr10P... | Banana | cytosol | 52.27 | 52.96 |
| GSMUA_Achr6P32330_001 | Banana | cytosol | 42.86 | 48.89 |
| Zm00001d013003_P001 | Maize | nucleus, plastid | 53.57 | 44.96 |
| Zm00001d042609_P001 | Maize | cytosol, mitochondrion, nucleus | 40.58 | 42.37 |
| Zm00001d038221_P001 | Maize | plastid | 40.58 | 36.87 |
| Zm00001d000112_P001 | Maize | nucleus | 39.29 | 33.7 |
| Zm00001d007850_P001 | Maize | nucleus | 26.95 | 33.07 |
| Zm00001d028999_P001 | Maize | nucleus | 38.31 | 31.64 |
| Zm00001d008399_P001 | Maize | nucleus | 37.66 | 29.15 |
| Zm00001d014843_P001 | Maize | nucleus | 24.68 | 28.36 |
| Zm00001d021818_P002 | Maize | nucleus | 38.31 | 28.16 |
| Zm00001d013151_P001 | Maize | cytosol | 30.52 | 27.98 |
| Zm00001d031164_P001 | Maize | nucleus | 27.6 | 27.78 |
| Zm00001d048347_P001 | Maize | nucleus | 27.6 | 26.81 |
| Zm00001d027530_P001 | Maize | nucleus | 27.6 | 26.15 |
| Zm00001d022424_P001 | Maize | nucleus | 27.27 | 25.45 |
| Zm00001d034277_P001 | Maize | cytosol, mitochondrion, nucleus | 29.55 | 24.73 |
| Zm00001d050410_P001 | Maize | nucleus | 29.87 | 24.15 |
| Zm00001d018773_P001 | Maize | nucleus | 27.92 | 24.02 |
| Zm00001d049687_P001 | Maize | nucleus | 28.57 | 23.91 |
| Zm00001d023294_P001 | Maize | nucleus | 36.69 | 23.79 |
| Zm00001d035076_P001 | Maize | mitochondrion, nucleus | 27.6 | 23.74 |
| Zm00001d032182_P001 | Maize | nucleus | 30.19 | 23.72 |
| Zm00001d020446_P001 | Maize | nucleus | 30.19 | 23.6 |
| Zm00001d036364_P001 | Maize | nucleus | 24.68 | 23.31 |
| Zm00001d010239_P001 | Maize | nucleus | 30.19 | 22.36 |
| Zm00001d038207_P001 | Maize | nucleus | 29.22 | 21.43 |
| Zm00001d042580_P001 | Maize | nucleus | 29.22 | 20.13 |
| Zm00001d018038_P001 | Maize | nucleus | 30.52 | 19.07 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | ProteinID:AQK99797.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| InterPro:IPR003441 | InterPro:IPR036093 | UniProt:K7W3P2 | EMBL:KM670444 | InterPro:NAC-dom | InterPro:NAC_dom_sf |
| PFAM:PF02365 | PFscan:PS51005 | PANTHER:PTHR31719 | PANTHER:PTHR31719:SF80 | SUPFAM:SSF101941 | UniParc:UPI0001ED17E1 |
| EnsemblPlantsGene:Zm00001d012527 | EnsemblPlants:Zm00001d012527_P001 | EnsemblPlants:Zm00001d012527_T001 | SEG:seg | : | : |
Description
NAC-transcription factor 23NAC domain-containing protein 2
Coordinates
chr8:+:176104082..176105842
Molecular Weight (calculated)
34513.8 Da
IEP (calculated)
8.974
GRAVY (calculated)
-0.663
Length
308 amino acids
Sequence
(BLAST)
(BLAST)
001: MAMVAAQGGG RRDAEAELNL PPGFRFHPTD EELVVHYLCR KVACQQLPVP IIAEVDLYKF DPWDLPEKAL FGRKEWYFFT PRDRKYPNGS RPNRAAGRGY
101: WKATGADKPI APKGGGGAAG IKKALVFYSG KAPRGFKTDW IMHEYRLADA DRAPGKKGSR KLDEWVLCRL YNKKNNWEKV KAEEPEAAAP FRHQQGAAED
201: SMSDSFQTHD SDIDNNAFGM QNGFGNMVHG QTMTMRNGIG SVARTVKEDN YWFTDLNLDD LQAPYNVTHV LNPNPVQTMN LAAGQGHGYL QSMSSPSTKM
301: WQTILPPF
101: WKATGADKPI APKGGGGAAG IKKALVFYSG KAPRGFKTDW IMHEYRLADA DRAPGKKGSR KLDEWVLCRL YNKKNNWEKV KAEEPEAAAP FRHQQGAAED
201: SMSDSFQTHD SDIDNNAFGM QNGFGNMVHG QTMTMRNGIG SVARTVKEDN YWFTDLNLDD LQAPYNVTHV LNPNPVQTMN LAAGQGHGYL QSMSSPSTKM
301: WQTILPPF
001: MSELLQLPPG FRFHPTDEEL VMHYLCRKCA SQSIAVPIIA EIDLYKYDPW ELPGLALYGE KEWYFFSPRD RKYPNGSRPN RSAGSGYWKA TGADKPIGLP
101: KPVGIKKALV FYAGKAPKGE KTNWIMHEYR LADVDRSVRK KKNSLRLDDW VLCRIYNKKG ATERRGPPPP VVYGDEIMEE KPKVTEMVMP PPPQQTSEFA
201: YFDTSDSVPK LHTTDSSCSE QVVSPEFTSE VQSEPKWKDW SAVSNDNNNT LDFGFNYIDA TVDNAFGGGG SSNQMFPLQD MFMYMQKPY
101: KPVGIKKALV FYAGKAPKGE KTNWIMHEYR LADVDRSVRK KKNSLRLDDW VLCRIYNKKG ATERRGPPPP VVYGDEIMEE KPKVTEMVMP PPPQQTSEFA
201: YFDTSDSVPK LHTTDSSCSE QVVSPEFTSE VQSEPKWKDW SAVSNDNNNT LDFGFNYIDA TVDNAFGGGG SSNQMFPLQD MFMYMQKPY
Arabidopsis Description
NAC002ATAF1 [Source:UniProtKB/TrEMBL;Acc:A0A178W8W1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.