Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER96087 | Sorghum | nucleus | 90.33 | 93.45 |
| Zm00001d005208_P001 | Maize | nucleus | 89.0 | 88.12 |
| Os07t0225300-01 | Rice | nucleus | 68.33 | 74.28 |
| HORVU3Hr1G094170.1 | Barley | nucleus | 31.0 | 73.23 |
| TraesCS6B01G075200.1 | Wheat | nucleus | 68.33 | 71.93 |
| TraesCS6A01G057400.1 | Wheat | nucleus | 67.33 | 69.66 |
| HORVU2Hr1G004130.1 | Barley | cytosol, nucleus | 58.33 | 62.5 |
| Zm00001d034601_P001 | Maize | nucleus | 64.33 | 61.86 |
| HORVU4Hr1G089660.1 | Barley | cytosol, nucleus | 46.0 | 60.79 |
| TraesCS6D01G059300.1 | Wheat | nucleus, plastid | 69.0 | 58.64 |
| GSMUA_Achr5P07590_001 | Banana | nucleus | 55.67 | 57.59 |
| GSMUA_Achr4P02390_001 | Banana | nucleus | 49.33 | 56.06 |
| GSMUA_Achr7P21780_001 | Banana | nucleus | 53.67 | 54.03 |
| Zm00001d012527_P001 | Maize | cytosol, mitochondrion, nucleus | 54.0 | 52.6 |
| GSMUA_Achr4P10310_001 | Banana | nucleus | 51.0 | 52.22 |
| VIT_06s0004g00020.t01 | Wine grape | nucleus | 51.33 | 51.85 |
| Zm00001d013003_P001 | Maize | nucleus, plastid | 61.0 | 49.86 |
| GSMUA_Achr10P... | Banana | cytosol | 48.67 | 48.03 |
| GSMUA_Achr6P32330_001 | Banana | cytosol | 43.0 | 47.78 |
| Zm00001d042609_P001 | Maize | cytosol, mitochondrion, nucleus | 43.0 | 43.73 |
| Zm00001d038221_P001 | Maize | plastid | 42.67 | 37.76 |
| Zm00001d000112_P001 | Maize | nucleus | 41.67 | 34.82 |
| Zm00001d028999_P001 | Maize | nucleus | 40.33 | 32.44 |
| Zm00001d007850_P001 | Maize | nucleus | 26.67 | 31.87 |
| Zm00001d014843_P001 | Maize | nucleus | 26.67 | 29.85 |
| Zm00001d008399_P001 | Maize | nucleus | 39.0 | 29.4 |
| Zm00001d021818_P002 | Maize | nucleus | 39.33 | 28.16 |
| Zm00001d031164_P001 | Maize | nucleus | 27.67 | 27.12 |
| Zm00001d022424_P001 | Maize | nucleus | 28.33 | 25.76 |
| Zm00001d013151_P001 | Maize | cytosol | 28.0 | 25.0 |
| Zm00001d048347_P001 | Maize | nucleus | 26.33 | 24.92 |
| Zm00001d023294_P001 | Maize | nucleus | 38.67 | 24.42 |
| Zm00001d027530_P001 | Maize | nucleus | 26.33 | 24.31 |
| Zm00001d036364_P001 | Maize | nucleus | 26.33 | 24.23 |
| Zm00001d018773_P001 | Maize | nucleus | 28.67 | 24.02 |
| Zm00001d049687_P001 | Maize | nucleus | 29.33 | 23.91 |
| Zm00001d035076_P001 | Maize | mitochondrion, nucleus | 28.33 | 23.74 |
| Zm00001d034277_P001 | Maize | cytosol, mitochondrion, nucleus | 27.33 | 22.28 |
| Zm00001d020446_P001 | Maize | nucleus | 28.0 | 21.32 |
| Zm00001d050410_P001 | Maize | nucleus | 27.0 | 21.26 |
| Zm00001d010239_P001 | Maize | nucleus | 29.33 | 21.15 |
| Zm00001d032182_P001 | Maize | nucleus | 27.0 | 20.66 |
| Zm00001d038207_P001 | Maize | nucleus | 28.33 | 20.24 |
| Zm00001d042580_P001 | Maize | nucleus | 28.33 | 19.02 |
| Zm00001d018038_P001 | Maize | nucleus | 28.0 | 17.04 |
Protein Annotations
| EntrezGene:100273749 | MapMan:15.5.17 | Gene3D:3.30.310.150 | UniProt:B4FXA7 | EMBL:BT041745 | ncoils:Coil |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR003441 | InterPro:IPR036093 | EMBL:KP283536 |
| InterPro:NAC-dom | InterPro:NAC_dom_sf | ProteinID:ONM52469.1 | PFAM:PF02365 | PFscan:PS51005 | PANTHER:PTHR31719 |
| PANTHER:PTHR31719:SF80 | SUPFAM:SSF101941 | UniParc:UPI000189D286 | EnsemblPlantsGene:Zm00001d019207 | EnsemblPlants:Zm00001d019207_P001 | EnsemblPlants:Zm00001d019207_T001 |
| SEG:seg | : | : | : | : | : |
Description
NAC-transcription factor 4NAC domain-containing protein 2
Coordinates
chr7:+:21927733..21929407
Molecular Weight (calculated)
33630.5 Da
IEP (calculated)
5.156
GRAVY (calculated)
-0.704
Length
300 amino acids
Sequence
(BLAST)
(BLAST)
001: MVAMAAVQQQ QQQQRRDAEA ELNLPPGFRF HPTDEELVAH YLCARAAGRR PPVSIIAEVD LYRFDPWDLP ERALFGRREW YFFTPRDRKY PNGSRPNRAA
101: GSGYWKATGA DKPVEHEGRT AGIKKALVFY HGKPPRGVKT EWIMHEYRLA EAGGARAKKS GAGTLRLDDW VLCRLYNKKN EWEKMQQQKE KEKKAMESEA
201: SLSHSHSDTR TPESEIDDDP FPELGSLPAF DDMGAAPAPA GVVLPKEEVE DFGDLGGDDW LAGINLDDLQ MPGDAADFYG SMLVSPMAAK MEPDGGFPFF
101: GSGYWKATGA DKPVEHEGRT AGIKKALVFY HGKPPRGVKT EWIMHEYRLA EAGGARAKKS GAGTLRLDDW VLCRLYNKKN EWEKMQQQKE KEKKAMESEA
201: SLSHSHSDTR TPESEIDDDP FPELGSLPAF DDMGAAPAPA GVVLPKEEVE DFGDLGGDDW LAGINLDDLQ MPGDAADFYG SMLVSPMAAK MEPDGGFPFF
001: MGLQELDPLA QLSLPPGFRF YPTDEELMVE YLCRKAAGHD FSLQLIAEID LYKFDPWVLP SKALFGEKEW YFFSPRDRKY PNGSRPNRVA GSGYWKATGT
101: DKVISTEGRR VGIKKALVFY IGKAPKGTKT NWIMHEYRLI EPSRRNGSTK LDDWVLCRIY KKQTSAQKQA YNNLMTSGRE YSNNGSSTSS SSHQYDDVLE
201: SLHEIDNRSL GFAAGSSNAL PHSHRPVLTN HKTGFQGLAR EPSFDWANLI GQNSVPELGL SHNVPSIRYG DGGTQQQTEG IPRFNNNSDV SANQGFSVDP
301: VNGFGYSGQQ SSGFGFI
101: DKVISTEGRR VGIKKALVFY IGKAPKGTKT NWIMHEYRLI EPSRRNGSTK LDDWVLCRIY KKQTSAQKQA YNNLMTSGRE YSNNGSSTSS SSHQYDDVLE
201: SLHEIDNRSL GFAAGSSNAL PHSHRPVLTN HKTGFQGLAR EPSFDWANLI GQNSVPELGL SHNVPSIRYG DGGTQQQTEG IPRFNNNSDV SANQGFSVDP
301: VNGFGYSGQQ SSGFGFI
Arabidopsis Description
NAC055NAC3 [Source:UniProtKB/TrEMBL;Acc:A0A178VLD3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.