Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER93360 | Sorghum | nucleus | 78.8 | 78.38 |
| Zm00001d013151_P001 | Maize | cytosol | 70.92 | 77.68 |
| Zm00001d007850_P001 | Maize | nucleus | 39.4 | 57.77 |
| GSMUA_Achr7P00860_001 | Banana | nucleus | 37.5 | 52.67 |
| GSMUA_Achr4P23030_001 | Banana | nucleus | 34.78 | 51.2 |
| Zm00001d018773_P001 | Maize | nucleus | 49.73 | 51.12 |
| VIT_19s0027g00880.t01 | Wine grape | nucleus | 29.62 | 50.93 |
| GSMUA_Achr5P02170_001 | Banana | nucleus | 42.39 | 50.81 |
| VIT_19s0027g00870.t01 | Wine grape | nucleus | 38.04 | 50.54 |
| VIT_12s0028g00860.t01 | Wine grape | nucleus | 40.22 | 49.66 |
| VIT_19s0027g00860.t01 | Wine grape | nucleus | 37.23 | 49.64 |
| AT2G43000.1 | Thale cress | nucleus | 35.33 | 47.27 |
| PGSC0003DMT400090327 | Potato | cytosol | 36.41 | 47.18 |
| VIT_19s0027g00840.t01 | Wine grape | nucleus | 36.41 | 47.18 |
| Bra000282.1-P | Field mustard | nucleus | 34.51 | 46.69 |
| KRH73618 | Soybean | cytosol | 40.49 | 46.56 |
| VIT_19s0027g00910.t01 | Wine grape | cytoskeleton, cytosol, nucleus | 36.96 | 46.1 |
| PGSC0003DMT400003082 | Potato | nucleus | 35.33 | 46.1 |
| KRH46012 | Soybean | nucleus | 38.04 | 46.05 |
| KRG98971 | Soybean | nucleus | 38.04 | 46.05 |
| Solyc05g021090.2.1 | Tomato | nucleus | 34.78 | 45.88 |
| KRH14512 | Soybean | nucleus | 40.49 | 45.71 |
| CDY53654 | Canola | nucleus | 34.24 | 45.16 |
| Solyc02g069960.2.1 | Tomato | nucleus | 38.04 | 45.16 |
| CDY55499 | Canola | nucleus | 34.24 | 45.16 |
| Bra037743.1-P | Field mustard | nucleus | 33.97 | 45.13 |
| CDY30373 | Canola | nucleus | 33.97 | 45.13 |
| Bra004736.1-P | Field mustard | nucleus | 34.24 | 45.0 |
| PGSC0003DMT400054407 | Potato | nucleus | 38.32 | 44.9 |
| CDY14865 | Canola | nucleus | 33.7 | 44.77 |
| CDY43391 | Canola | nucleus | 35.87 | 44.75 |
| AT3G12910.1 | Thale cress | nucleus | 36.68 | 44.55 |
| CDY24238 | Canola | nucleus | 36.68 | 43.97 |
| Bra039353.1-P | Field mustard | nucleus | 36.68 | 43.97 |
| CDY64562 | Canola | nucleus | 35.05 | 43.88 |
| CDX82569 | Canola | nucleus | 35.6 | 43.38 |
| KRH13702 | Soybean | nucleus | 37.23 | 43.08 |
| Zm00001d031164_P001 | Maize | nucleus | 35.6 | 42.81 |
| Solyc07g045030.2.1 | Tomato | nucleus | 38.32 | 42.6 |
| PGSC0003DMT400049124 | Potato | nucleus | 28.53 | 42.0 |
| CDY60122 | Canola | nucleus | 35.6 | 40.06 |
| Bra034719.1-P | Field mustard | nucleus | 35.33 | 39.76 |
| CDY23551 | Canola | nucleus | 35.87 | 35.2 |
| Zm00001d050410_P001 | Maize | nucleus | 32.07 | 30.97 |
| Zm00001d032182_P001 | Maize | nucleus | 32.34 | 30.36 |
| Zm00001d012527_P001 | Maize | cytosol, mitochondrion, nucleus | 24.73 | 29.55 |
| Zm00001d020446_P001 | Maize | nucleus | 31.25 | 29.19 |
| Zm00001d048347_P001 | Maize | nucleus | 25.0 | 29.02 |
| Zm00001d027530_P001 | Maize | nucleus | 25.54 | 28.92 |
| Zm00001d042609_P001 | Maize | cytosol, mitochondrion, nucleus | 23.1 | 28.81 |
| Zm00001d014843_P001 | Maize | nucleus | 20.65 | 28.36 |
| Zm00001d019207_P001 | Maize | nucleus | 22.28 | 27.33 |
| Zm00001d034601_P001 | Maize | nucleus | 23.1 | 27.24 |
| Zm00001d005208_P001 | Maize | nucleus | 22.28 | 27.06 |
| Zm00001d038221_P001 | Maize | plastid | 24.46 | 26.55 |
| Zm00001d010239_P001 | Maize | nucleus | 29.08 | 25.72 |
| Zm00001d038207_P001 | Maize | nucleus | 29.35 | 25.71 |
| Zm00001d036364_P001 | Maize | nucleus | 22.55 | 25.46 |
| Zm00001d049687_P001 | Maize | nucleus | 25.27 | 25.27 |
| CDY42810 | Canola | nucleus | 34.78 | 25.1 |
| Zm00001d028999_P001 | Maize | nucleus | 25.27 | 24.93 |
| CDX83510 | Canola | nucleus | 34.51 | 24.9 |
| Zm00001d018038_P001 | Maize | nucleus | 32.88 | 24.54 |
| Zm00001d035076_P001 | Maize | mitochondrion, nucleus | 23.64 | 24.3 |
| Zm00001d000112_P001 | Maize | nucleus | 23.1 | 23.68 |
| Zm00001d013003_P001 | Maize | nucleus, plastid | 23.37 | 23.43 |
| Zm00001d008399_P001 | Maize | nucleus | 25.27 | 23.37 |
| Zm00001d021818_P002 | Maize | nucleus | 26.36 | 23.15 |
| Zm00001d042580_P001 | Maize | nucleus | 27.99 | 23.04 |
| Zm00001d023294_P001 | Maize | nucleus | 24.46 | 18.95 |
| Zm00001d022424_P001 | Maize | nucleus | 16.3 | 18.18 |
Protein Annotations
| EntrezGene:100280103 | MapMan:15.5.17 | Gene3D:3.30.310.150 | UniProt:B8A1Y7 | EMBL:BT055579 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR003441 | InterPro:IPR036093 | InterPro:NAC-dom | InterPro:NAC_dom_sf |
| ProteinID:ONM09914.1 | PFAM:PF02365 | PFscan:PS51005 | PANTHER:PTHR44543 | PANTHER:PTHR44543:SF3 | SUPFAM:SSF101941 |
| UniParc:UPI0001917803 | EnsemblPlantsGene:Zm00001d034277 | EnsemblPlants:Zm00001d034277_P001 | EnsemblPlants:Zm00001d034277_T001 | SEG:seg | : |
Description
NAC-transcription factor 7Transcription factor JUNGBRUNNEN 1
Coordinates
chr1:+:288351666..288353564
Molecular Weight (calculated)
40724.0 Da
IEP (calculated)
7.877
GRAVY (calculated)
-0.511
Length
368 amino acids
Sequence
(BLAST)
(BLAST)
001: MVVKEFGREV VMSMDKVKRG GEALMAAGAG AGDEEKDDAV LPGFRFHPTD EELVTFYLRR KVARKPLSME IIKEMDIYKH DPWDLPKAST AAGGEKEWYF
101: FCLRGRKYRN SIRPNRVTGS GFWKATGIDR HIYPATANPV ESVSVGLKKS LVYYRGSAGK GTKTDWMMHE FRLPPAAASP SPTPTSMQEA EVWTICRIFK
201: RNIAYKRQPQ LPAWRQQQQS SSNTGSFESD GGGGGDEYMN RCLPVPATAT ATAHQIGGML NGGGVVSATG SSSSSFFRDR ESVHGGQQFH FHEQWLSRFP
301: AAPAVEQKPQ LLDPSAMAIA FHQNDDQSVA TAAAAAASEC CKDGYYWDEI ARFMEVNDPT VLHDCRYA
101: FCLRGRKYRN SIRPNRVTGS GFWKATGIDR HIYPATANPV ESVSVGLKKS LVYYRGSAGK GTKTDWMMHE FRLPPAAASP SPTPTSMQEA EVWTICRIFK
201: RNIAYKRQPQ LPAWRQQQQS SSNTGSFESD GGGGGDEYMN RCLPVPATAT ATAHQIGGML NGGGVVSATG SSSSSFFRDR ESVHGGQQFH FHEQWLSRFP
301: AAPAVEQKPQ LLDPSAMAIA FHQNDDQSVA TAAAAAASEC CKDGYYWDEI ARFMEVNDPT VLHDCRYA
001: MSGEGNLGKD HEEENEAPLP GFRFHPTDEE LLGYYLRRKV ENKTIKLELI KQIDIYKYDP WDLPRVSSVG EKEWYFFCMR GRKYRNSVRP NRVTGSGFWK
101: ATGIDKPVYS NLDCVGLKKS LVYYLGSAGK GTKTDWMMHE FRLPSTTKTD SPAQQAEVWT LCRIFKRVTS QRNPTILPPN RKPVITLTDT CSKTSSLDSD
201: HTSHRTVDSM SHEPPLPQPQ NPYWNQHIVG FNQPTYTGND NNLLMSFWNG NGGDFIGDSA SWDELRSVID GNTKP
101: ATGIDKPVYS NLDCVGLKKS LVYYLGSAGK GTKTDWMMHE FRLPSTTKTD SPAQQAEVWT LCRIFKRVTS QRNPTILPPN RKPVITLTDT CSKTSSLDSD
201: HTSHRTVDSM SHEPPLPQPQ NPYWNQHIVG FNQPTYTGND NNLLMSFWNG NGGDFIGDSA SWDELRSVID GNTKP
Arabidopsis Description
JUB1Transcription factor JUNGBRUNNEN 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SK55]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.