Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- cytosol 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
Bra000282.1-P | Field mustard | nucleus | 52.35 | 98.16 |
CDY42810 | Canola | nucleus | 96.47 | 96.47 |
CDY30373 | Canola | nucleus | 47.45 | 87.36 |
CDY14865 | Canola | nucleus | 47.06 | 86.64 |
CDY53654 | Canola | nucleus | 46.67 | 85.3 |
CDY55499 | Canola | nucleus | 46.47 | 84.95 |
AT2G43000.1 | Thale cress | nucleus | 45.49 | 84.36 |
GSMUA_Achr4P23030_001 | Banana | nucleus | 24.51 | 50.0 |
CDY26031 | Canola | cytosol | 14.71 | 49.67 |
GSMUA_Achr7P00860_001 | Banana | nucleus | 25.49 | 49.62 |
GSMUA_Achr10P... | Banana | cytosol | 25.29 | 48.31 |
KRH73618 | Soybean | cytosol | 29.41 | 46.88 |
GSMUA_Achr4P32010_001 | Banana | nucleus | 26.27 | 46.69 |
CDY26032 | Canola | cytosol | 14.71 | 46.58 |
CDY43391 | Canola | nucleus | 26.86 | 46.44 |
KRH14512 | Soybean | nucleus | 29.41 | 46.01 |
CDY24238 | Canola | nucleus | 27.45 | 45.6 |
CDY64562 | Canola | nucleus | 26.08 | 45.24 |
Zm00001d007850_P001 | Maize | nucleus | 22.16 | 45.02 |
GSMUA_Achr5P02170_001 | Banana | nucleus | 27.06 | 44.95 |
GSMUA_Achr9P10040_001 | Banana | nucleus | 26.67 | 44.74 |
CDX82569 | Canola | nucleus | 25.69 | 43.38 |
Solyc07g045030.2.1 | Tomato | nucleus | 27.84 | 42.9 |
CDX82430 | Canola | nucleus | 16.08 | 41.21 |
CDY60122 | Canola | nucleus | 26.27 | 40.98 |
PGSC0003DMT400049124 | Potato | nucleus | 19.8 | 40.4 |
CDY22671 | Canola | nucleus | 15.69 | 40.2 |
EES17466 | Sorghum | nucleus | 22.75 | 38.16 |
Zm00001d013151_P001 | Maize | cytosol | 24.9 | 37.8 |
HORVU5Hr1G099470.2 | Barley | cytosol | 24.71 | 37.39 |
Zm00001d031164_P001 | Maize | nucleus | 22.35 | 37.25 |
TraesCS5A01G411900.1 | Wheat | nucleus | 24.9 | 37.03 |
EER95852 | Sorghum | nucleus | 24.71 | 36.73 |
TraesCS5D01G421100.1 | Wheat | nucleus | 24.51 | 36.66 |
TraesCS5B01G415700.1 | Wheat | nucleus | 24.9 | 36.29 |
HORVU5Hr1G099390.2 | Barley | nucleus | 20.39 | 35.99 |
TraesCS4B01G384700.1 | Wheat | cytoskeleton, cytosol, nucleus | 23.92 | 35.88 |
EER93360 | Sorghum | nucleus | 25.88 | 35.68 |
TraesCS5B01G415600.1 | Wheat | nucleus | 24.51 | 35.61 |
Zm00001d018773_P001 | Maize | nucleus | 24.9 | 35.47 |
CDY23551 | Canola | nucleus | 26.08 | 35.47 |
Os03t0777000-01 | Rice | nucleus | 25.1 | 35.36 |
TraesCS5D01G420800.1 | Wheat | nucleus | 25.1 | 35.16 |
TraesCS5A01G411800.1 | Wheat | nucleus | 24.12 | 34.94 |
HORVU5Hr1G099460.1 | Barley | nucleus | 23.53 | 34.68 |
Zm00001d034277_P001 | Maize | cytosol, mitochondrion, nucleus | 24.9 | 34.51 |
TraesCS5A01G411700.1 | Wheat | nucleus | 25.29 | 34.22 |
TraesCS5B01G415400.1 | Wheat | nucleus | 25.1 | 33.95 |
CDY40732 | Canola | cytosol, nucleus, plastid | 16.67 | 32.95 |
TraesCS5D01G421000.1 | Wheat | nucleus | 24.71 | 32.81 |
CDY41537 | Canola | nucleus | 16.08 | 32.8 |
CDX82432 | Canola | nucleus | 15.88 | 32.79 |
CDY44788 | Canola | cytosol, nucleus, plastid | 16.67 | 32.44 |
CDX84443 | Canola | nucleus | 15.88 | 32.14 |
CDY31350 | Canola | nucleus | 16.47 | 31.7 |
CDX78352 | Canola | cytosol, nucleus, plastid | 16.27 | 31.68 |
CDY07348 | Canola | nucleus | 16.67 | 31.37 |
CDX89253 | Canola | nucleus | 18.43 | 31.33 |
CDX92828 | Canola | nucleus | 18.43 | 31.33 |
CDY29836 | Canola | nucleus | 18.43 | 31.33 |
CDY51500 | Canola | nucleus | 16.67 | 31.25 |
CDY40894 | Canola | nucleus | 15.88 | 31.15 |
CDX95931 | Canola | cytosol | 16.47 | 31.11 |
CDY40930 | Canola | cytosol | 16.47 | 31.11 |
CDX67438 | Canola | nucleus | 20.39 | 31.04 |
CDY29303 | Canola | nucleus | 18.24 | 31.0 |
CDX90054 | Canola | nucleus | 17.25 | 30.88 |
CDY11662 | Canola | nucleus | 20.2 | 30.75 |
CDX69919 | Canola | nucleus | 16.67 | 30.58 |
CDY21567 | Canola | nucleus | 16.67 | 30.58 |
CDY15158 | Canola | nucleus | 17.06 | 30.42 |
CDY38346 | Canola | cytosol, nucleus, plastid | 15.49 | 30.38 |
CDY42902 | Canola | nucleus | 16.67 | 30.36 |
CDY26794 | Canola | nucleus | 16.27 | 29.75 |
CDY47486 | Canola | nucleus | 16.27 | 29.75 |
CDX81120 | Canola | nucleus | 13.92 | 29.46 |
CDY47485 | Canola | nucleus | 16.08 | 29.39 |
CDY39487 | Canola | nucleus | 16.08 | 29.18 |
CDX71329 | Canola | endoplasmic reticulum, extracellular | 17.45 | 28.99 |
CDX75833 | Canola | nucleus | 16.86 | 28.96 |
CDY02222 | Canola | nucleus | 15.88 | 28.83 |
CDY31385 | Canola | cytosol | 17.45 | 27.9 |
CDY39846 | Canola | mitochondrion | 16.08 | 27.89 |
CDY69545 | Canola | nucleus | 17.06 | 27.88 |
CDY21844 | Canola | nucleus | 17.25 | 27.76 |
CDY53806 | Canola | nucleus | 17.25 | 27.67 |
CDX98560 | Canola | nucleus | 17.25 | 27.5 |
CDY20109 | Canola | nucleus | 17.06 | 27.44 |
CDX97674 | Canola | nucleus | 17.25 | 27.41 |
CDY65270 | Canola | nucleus | 21.18 | 27.34 |
CDY12886 | Canola | nucleus | 17.06 | 27.1 |
CDY40970 | Canola | nucleus | 17.06 | 27.02 |
CDY56427 | Canola | nucleus | 16.86 | 26.3 |
CDY01755 | Canola | nucleus | 20.39 | 26.2 |
CDY50880 | Canola | nucleus | 16.67 | 26.15 |
CDY46433 | Canola | nucleus | 20.78 | 25.73 |
CDX95910 | Canola | nucleus | 20.59 | 25.67 |
CDY20131 | Canola | nucleus | 17.25 | 25.14 |
CDX97675 | Canola | nucleus | 16.86 | 25.07 |
CDY29983 | Canola | nucleus | 16.86 | 24.23 |
CDX98562 | Canola | nucleus | 16.67 | 23.68 |
CDX84050 | Canola | nucleus | 8.82 | 23.32 |
CDY17437 | Canola | nucleus | 17.84 | 22.41 |
CDY03050 | Canola | nucleus | 17.84 | 21.98 |
CDY17595 | Canola | nucleus | 17.84 | 21.82 |
CDY04129 | Canola | nucleus | 17.45 | 21.81 |
CDY09368 | Canola | nucleus | 17.25 | 21.67 |
CDY15835 | Canola | nucleus | 17.25 | 21.62 |
CDY54324 | Canola | extracellular | 4.71 | 8.66 |
CDY16201 | Canola | plastid | 3.92 | 7.6 |
CDX82429 | Canola | plastid | 0.78 | 3.74 |
Protein Annotations
MapMan:15.5.17 | Gene3D:3.30.1330.80 | Gene3D:3.30.310.150 | GO:A0A078D307 | EnsemblPlants:CDX83510 | ProteinID:CDX83510 |
ProteinID:CDX83510.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0006139 |
GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00139105001 |
InterPro:IPR003441 | InterPro:IPR005175 | InterPro:IPR036093 | InterPro:NAC-dom | InterPro:NAC_dom_sf | PFAM:PF02365 |
PFAM:PF03479 | InterPro:PPC_dom | PFscan:PS51005 | PFscan:PS51742 | PANTHER:PTHR31100 | PANTHER:PTHR31100:SF17 |
SUPFAM:SSF101941 | SUPFAM:SSF117856 | TMHMM:TMhelix | UniParc:UPI0004EEA531 | SEG:seg | : |
Description
BnaA03g19960D
Coordinates
chrLK031832:+:1871105..1874643
Molecular Weight (calculated)
56495.0 Da
IEP (calculated)
9.004
GRAVY (calculated)
-0.493
Length
510 amino acids
Sequence
(BLAST)
(BLAST)
001: MSCEGKDQEE EDEAILPGFR FHPTDEELLG FYLRRKVENK PIKLELIKQI DIYKFDPWDL PRVSSVGENE WYFFCMRGRK YKNSVRPNRV TGSGFWKATG
101: IDKPVYSNFN CIGLKKSLVY YLGSAGKGSK TDWMMHEFRL PTTTKTDSTA QQAEVWTLCR IFKRVTHHRN PTIIQQNRKP VITLTDSCSK TSSLDSDHTS
201: HRVVDSLPHK LHEPQTQNPY WNQLTTVGFN QPTYTCHDNN FLSFLNINGG DFIGDSASWD ELRSSLLPLR NHEAAERVNN NNNNNSLKAL PKAVQPVSSI
301: DGGMVKRPRG RPAGSKNKPK PPIIVTHDSP NSLRAHAVEI SSGNDICEAL SDYARRKQRG LCILSANGCV TNVTLRQPAS SGAIVTLHGR FEILSLLGSI
401: LPPPAPLGIT GLTIYLAGHQ GRVVGGGVVG GLIASGPVVI MAASFMNAVF DRLPLDDDES ASMQNQQYYQ NGRSRPLDDI HGLSQNLLTN GNSGSDGYSW
501: GAAQRAMSKP
101: IDKPVYSNFN CIGLKKSLVY YLGSAGKGSK TDWMMHEFRL PTTTKTDSTA QQAEVWTLCR IFKRVTHHRN PTIIQQNRKP VITLTDSCSK TSSLDSDHTS
201: HRVVDSLPHK LHEPQTQNPY WNQLTTVGFN QPTYTCHDNN FLSFLNINGG DFIGDSASWD ELRSSLLPLR NHEAAERVNN NNNNNSLKAL PKAVQPVSSI
301: DGGMVKRPRG RPAGSKNKPK PPIIVTHDSP NSLRAHAVEI SSGNDICEAL SDYARRKQRG LCILSANGCV TNVTLRQPAS SGAIVTLHGR FEILSLLGSI
401: LPPPAPLGIT GLTIYLAGHQ GRVVGGGVVG GLIASGPVVI MAASFMNAVF DRLPLDDDES ASMQNQQYYQ NGRSRPLDDI HGLSQNLLTN GNSGSDGYSW
501: GAAQRAMSKP
001: MSGEGNLGKD HEEENEAPLP GFRFHPTDEE LLGYYLRRKV ENKTIKLELI KQIDIYKYDP WDLPRVSSVG EKEWYFFCMR GRKYRNSVRP NRVTGSGFWK
101: ATGIDKPVYS NLDCVGLKKS LVYYLGSAGK GTKTDWMMHE FRLPSTTKTD SPAQQAEVWT LCRIFKRVTS QRNPTILPPN RKPVITLTDT CSKTSSLDSD
201: HTSHRTVDSM SHEPPLPQPQ NPYWNQHIVG FNQPTYTGND NNLLMSFWNG NGGDFIGDSA SWDELRSVID GNTKP
101: ATGIDKPVYS NLDCVGLKKS LVYYLGSAGK GTKTDWMMHE FRLPSTTKTD SPAQQAEVWT LCRIFKRVTS QRNPTILPPN RKPVITLTDT CSKTSSLDSD
201: HTSHRTVDSM SHEPPLPQPQ NPYWNQHIVG FNQPTYTGND NNLLMSFWNG NGGDFIGDSA SWDELRSVID GNTKP
Arabidopsis Description
JUB1Transcription factor JUNGBRUNNEN 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SK55]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.