Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra021113.1-P | Field mustard | nucleus | 99.68 | 99.68 |
| CDY21844 | Canola | nucleus | 98.42 | 98.42 |
| CDY26031 | Canola | cytosol | 43.85 | 92.05 |
| CDY26032 | Canola | cytosol | 44.16 | 86.96 |
| AT3G15500.1 | Thale cress | nucleus | 84.86 | 84.86 |
| CDX82432 | Canola | nucleus | 64.35 | 82.59 |
| CDX97674 | Canola | nucleus | 83.6 | 82.55 |
| CDX98560 | Canola | nucleus | 83.28 | 82.5 |
| CDX75833 | Canola | nucleus | 75.71 | 80.81 |
| CDY29303 | Canola | nucleus | 56.15 | 59.33 |
| CDY29836 | Canola | nucleus | 55.84 | 59.0 |
| CDX92828 | Canola | nucleus | 55.52 | 58.67 |
| CDX89253 | Canola | nucleus | 55.52 | 58.67 |
| VIT_19s0014g03290.t01 | Wine grape | nucleus | 58.36 | 55.56 |
| CDX82430 | Canola | nucleus | 34.38 | 54.77 |
| CDY22671 | Canola | nucleus | 34.07 | 54.27 |
| KRH22137 | Soybean | nucleus | 58.04 | 53.64 |
| KRH27201 | Soybean | nucleus | 58.04 | 53.33 |
| Solyc12g013620.1.1 | Tomato | nucleus | 56.78 | 51.58 |
| PGSC0003DMT400039670 | Potato | nucleus | 56.78 | 51.28 |
| CDY41537 | Canola | nucleus | 35.02 | 44.4 |
| CDX84443 | Canola | nucleus | 34.7 | 43.65 |
| CDY40732 | Canola | cytosol, nucleus, plastid | 35.33 | 43.41 |
| CDY40894 | Canola | nucleus | 35.33 | 43.08 |
| CDY44788 | Canola | cytosol, nucleus, plastid | 35.33 | 42.75 |
| CDY38346 | Canola | cytosol, nucleus, plastid | 35.02 | 42.69 |
| CDX78352 | Canola | cytosol, nucleus, plastid | 35.02 | 42.37 |
| CDX90054 | Canola | nucleus | 37.85 | 42.11 |
| CDY15158 | Canola | nucleus | 37.54 | 41.61 |
| CDX69919 | Canola | nucleus | 36.28 | 41.37 |
| CDY31350 | Canola | nucleus | 34.38 | 41.13 |
| CDX81120 | Canola | nucleus | 31.23 | 41.08 |
| CDY21567 | Canola | nucleus | 35.96 | 41.01 |
| CDY42902 | Canola | nucleus | 35.65 | 40.36 |
| CDY40930 | Canola | cytosol | 33.75 | 39.63 |
| CDX95931 | Canola | cytosol | 33.75 | 39.63 |
| CDY07348 | Canola | nucleus | 32.81 | 38.38 |
| CDY51500 | Canola | nucleus | 32.81 | 38.24 |
| CDY12886 | Canola | nucleus | 38.17 | 37.69 |
| CDY40970 | Canola | nucleus | 38.17 | 37.58 |
| CDY39846 | Canola | mitochondrion | 34.38 | 37.07 |
| CDY69545 | Canola | nucleus | 36.28 | 36.86 |
| CDX84050 | Canola | nucleus | 22.08 | 36.27 |
| CDY53806 | Canola | nucleus | 36.28 | 36.16 |
| CDY50880 | Canola | nucleus | 36.91 | 36.0 |
| CDY56427 | Canola | nucleus | 36.59 | 35.47 |
| CDX97675 | Canola | nucleus | 36.91 | 34.11 |
| CDY20131 | Canola | nucleus | 37.54 | 34.0 |
| CDY29983 | Canola | nucleus | 36.59 | 32.68 |
| CDY14865 | Canola | nucleus | 28.39 | 32.49 |
| CDX98562 | Canola | nucleus | 36.59 | 32.31 |
| CDY30373 | Canola | nucleus | 28.08 | 32.13 |
| CDY55499 | Canola | nucleus | 27.13 | 30.82 |
| CDY53654 | Canola | nucleus | 27.13 | 30.82 |
| CDX67438 | Canola | nucleus | 29.65 | 28.06 |
| CDY26794 | Canola | nucleus | 24.61 | 27.96 |
| CDY47486 | Canola | nucleus | 24.61 | 27.96 |
| CDY47485 | Canola | nucleus | 24.61 | 27.96 |
| CDY64562 | Canola | nucleus | 25.87 | 27.89 |
| CDY43391 | Canola | nucleus | 25.87 | 27.8 |
| CDY11662 | Canola | nucleus | 29.34 | 27.76 |
| CDY24238 | Canola | nucleus | 26.5 | 27.36 |
| CDY39487 | Canola | nucleus | 23.97 | 27.05 |
| CDX82569 | Canola | nucleus | 25.55 | 26.82 |
| CDY02222 | Canola | nucleus | 23.66 | 26.69 |
| CDY60122 | Canola | nucleus | 27.44 | 26.61 |
| CDX71329 | Canola | endoplasmic reticulum, extracellular | 24.61 | 25.41 |
| CDY65270 | Canola | nucleus | 30.91 | 24.81 |
| CDY31385 | Canola | cytosol | 24.61 | 24.45 |
| CDY46433 | Canola | nucleus | 31.23 | 24.03 |
| CDY23551 | Canola | nucleus | 27.13 | 22.93 |
| CDY01755 | Canola | nucleus | 28.71 | 22.92 |
| CDY17437 | Canola | nucleus | 29.34 | 22.91 |
| CDX95910 | Canola | nucleus | 29.34 | 22.74 |
| CDY15835 | Canola | nucleus | 29.02 | 22.6 |
| CDY04129 | Canola | nucleus | 29.02 | 22.55 |
| CDY09368 | Canola | nucleus | 28.71 | 22.41 |
| CDY03050 | Canola | nucleus | 28.71 | 21.98 |
| CDY17595 | Canola | nucleus | 28.71 | 21.82 |
| CDY42810 | Canola | nucleus | 27.44 | 17.06 |
| CDX83510 | Canola | nucleus | 27.44 | 17.06 |
| CDY54324 | Canola | extracellular | 5.99 | 6.86 |
| CDY16201 | Canola | plastid | 5.36 | 6.46 |
| CDX82429 | Canola | plastid | 1.26 | 3.74 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | GO:A0A078G3Z0 | UniProt:A0A078G3Z0 | EnsemblPlants:CDY20109 | ProteinID:CDY20109 |
| ProteinID:CDY20109.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00009965001 | InterPro:IPR003441 |
| InterPro:IPR036093 | InterPro:NAC-dom | InterPro:NAC_dom_sf | PFAM:PF02365 | PFscan:PS51005 | PANTHER:PTHR44908 |
| SUPFAM:SSF101941 | UniParc:UPI0004EEF7B1 | SEG:seg | : | : | : |
Description
BnaA01g28930DBnaA01g28930D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G3Z0]
Coordinates
chrLK032103:-:216449..217575
Molecular Weight (calculated)
35831.6 Da
IEP (calculated)
7.759
GRAVY (calculated)
-0.777
Length
317 amino acids
Sequence
(BLAST)
(BLAST)
001: MGIQELDPLA QLSLPPGFRF YPTDEELMVE YLCRKAAGHD FSLQLIAEID LYKFDAWVLP SKALFGEKEW YFFSPRDRKY PNGSRPNRVA GSGYWKATGT
101: DKVISTEGRR VGIKKALVFY VGKAPKGTKT NWIMHEYRLI EPSRRYGSTK LDDWVLCRIY KKQSSAQKQV YSNPMTSGRE YSNNDSSTSS SSHQYNDVLE
201: SLHEIDNRSL GFAAGSSNAP PHHSHRPSLN EQKTGFLNLA REPSFDWPSY GGHNSVPELT PSHNVPRLRY GDGGGYFQSV KTNEEDNKTQ QQAEGFSADP
301: VNGFGYSDQQ HDAFGFI
101: DKVISTEGRR VGIKKALVFY VGKAPKGTKT NWIMHEYRLI EPSRRYGSTK LDDWVLCRIY KKQSSAQKQV YSNPMTSGRE YSNNDSSTSS SSHQYNDVLE
201: SLHEIDNRSL GFAAGSSNAP PHHSHRPSLN EQKTGFLNLA REPSFDWPSY GGHNSVPELT PSHNVPRLRY GDGGGYFQSV KTNEEDNKTQ QQAEGFSADP
301: VNGFGYSDQQ HDAFGFI
001: MGLQELDPLA QLSLPPGFRF YPTDEELMVE YLCRKAAGHD FSLQLIAEID LYKFDPWVLP SKALFGEKEW YFFSPRDRKY PNGSRPNRVA GSGYWKATGT
101: DKVISTEGRR VGIKKALVFY IGKAPKGTKT NWIMHEYRLI EPSRRNGSTK LDDWVLCRIY KKQTSAQKQA YNNLMTSGRE YSNNGSSTSS SSHQYDDVLE
201: SLHEIDNRSL GFAAGSSNAL PHSHRPVLTN HKTGFQGLAR EPSFDWANLI GQNSVPELGL SHNVPSIRYG DGGTQQQTEG IPRFNNNSDV SANQGFSVDP
301: VNGFGYSGQQ SSGFGFI
101: DKVISTEGRR VGIKKALVFY IGKAPKGTKT NWIMHEYRLI EPSRRNGSTK LDDWVLCRIY KKQTSAQKQA YNNLMTSGRE YSNNGSSTSS SSHQYDDVLE
201: SLHEIDNRSL GFAAGSSNAL PHSHRPVLTN HKTGFQGLAR EPSFDWANLI GQNSVPELGL SHNVPSIRYG DGGTQQQTEG IPRFNNNSDV SANQGFSVDP
301: VNGFGYSGQQ SSGFGFI
Arabidopsis Description
NAC055NAC3 [Source:UniProtKB/TrEMBL;Acc:A0A178VLD3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.