Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH27201 | Soybean | nucleus | 94.46 | 93.91 |
| CDY26031 | Canola | cytosol | 37.61 | 85.43 |
| CDY26032 | Canola | cytosol | 37.32 | 79.5 |
| VIT_19s0014g03290.t01 | Wine grape | nucleus | 68.22 | 70.27 |
| KRH26056 | Soybean | nucleus | 69.39 | 70.0 |
| KRH55355 | Soybean | nucleus | 67.64 | 68.84 |
| CDX82432 | Canola | nucleus | 48.98 | 68.02 |
| KRH32805 | Soybean | nucleus | 25.07 | 63.24 |
| CDY29836 | Canola | nucleus | 54.23 | 62.0 |
| CDX92828 | Canola | nucleus | 53.94 | 61.67 |
| CDY29303 | Canola | nucleus | 53.94 | 61.67 |
| PGSC0003DMT400049665 | Potato | nucleus | 63.85 | 61.52 |
| Bra019052.1-P | Field mustard | nucleus | 53.64 | 61.33 |
| Bra001596.1-P | Field mustard | nucleus | 52.48 | 61.02 |
| Bra026353.1-P | Field mustard | nucleus | 53.35 | 61.0 |
| CDX89253 | Canola | nucleus | 53.35 | 61.0 |
| CDX75833 | Canola | nucleus | 52.77 | 60.94 |
| KRH32801 | Soybean | nucleus | 22.74 | 60.94 |
| AT3G15500.1 | Thale cress | nucleus | 55.69 | 60.25 |
| AT1G52890.1 | Thale cress | nucleus | 55.69 | 60.25 |
| CDX98560 | Canola | nucleus | 55.98 | 60.0 |
| AT4G27410.3 | Thale cress | nucleus | 54.81 | 59.87 |
| CDX97674 | Canola | nucleus | 55.98 | 59.81 |
| Solyc07g063410.2.1 | Tomato | nucleus | 61.52 | 59.27 |
| CDY20109 | Canola | nucleus | 53.64 | 58.04 |
| CDY21844 | Canola | nucleus | 53.64 | 58.04 |
| Bra021113.1-P | Field mustard | nucleus | 53.35 | 57.73 |
| Bra027238.1-P | Field mustard | nucleus | 55.98 | 57.66 |
| KRH57817 | Soybean | nucleus | 27.41 | 53.11 |
| KRH26008 | Soybean | nucleus | 27.41 | 52.22 |
| KRH50570 | Soybean | nucleus | 33.24 | 48.93 |
| Bra018998.1-P | Field mustard | nucleus | 53.64 | 48.04 |
| KRH17977 | Soybean | nucleus | 36.73 | 47.01 |
| KRH16387 | Soybean | nucleus | 37.61 | 46.07 |
| KRH53959 | Soybean | nucleus | 38.19 | 44.41 |
| KRH63977 | Soybean | nucleus | 37.61 | 44.33 |
| KRH53247 | Soybean | nucleus | 37.9 | 43.48 |
| KRH59618 | Soybean | nucleus | 37.61 | 43.29 |
| KRH64668 | Soybean | nucleus | 37.32 | 42.67 |
| KRG89575 | Soybean | nucleus | 33.24 | 40.71 |
| KRH70773 | Soybean | cytosol | 32.36 | 39.78 |
| KRH74907 | Soybean | nucleus | 32.36 | 39.78 |
| KRH67671 | Soybean | cytosol | 31.78 | 37.98 |
| KRG94779 | Soybean | nucleus | 34.99 | 35.71 |
| KRH70122 | Soybean | nucleus | 36.44 | 35.31 |
| KRH10810 | Soybean | nucleus | 36.15 | 35.03 |
| KRH08465 | Soybean | nucleus | 37.03 | 34.99 |
| KRH49988 | Soybean | nucleus | 36.73 | 34.81 |
| KRH06741 | Soybean | nucleus | 35.57 | 34.56 |
| KRG95963 | Soybean | nucleus | 33.82 | 34.42 |
| KRH22138 | Soybean | nucleus | 37.61 | 34.4 |
| KRH26054 | Soybean | nucleus | 35.86 | 34.17 |
| KRH26398 | Soybean | nucleus | 34.69 | 34.1 |
| KRH27199 | Soybean | nucleus | 37.03 | 33.87 |
| KRH21510 | Soybean | nucleus | 35.57 | 33.61 |
| KRH55357 | Soybean | nucleus | 35.57 | 33.15 |
| KRH22920 | Soybean | nucleus | 33.53 | 32.95 |
| KRG98971 | Soybean | nucleus | 26.24 | 29.61 |
| KRH46012 | Soybean | nucleus | 26.24 | 29.61 |
| KRH73618 | Soybean | cytosol | 27.11 | 29.06 |
| KRH13702 | Soybean | nucleus | 26.82 | 28.93 |
| KRH14512 | Soybean | nucleus | 27.11 | 28.53 |
| KRH29090 | Soybean | nucleus | 24.2 | 27.48 |
| KRH24118 | Soybean | cytosol | 23.62 | 27.27 |
| KRG93526 | Soybean | nucleus | 28.86 | 26.98 |
| KRH18479 | Soybean | nucleus | 27.7 | 25.0 |
| KRH51263 | Soybean | nucleus | 29.15 | 25.0 |
| KRH01889 | Soybean | nucleus | 28.86 | 24.57 |
| KRH45921 | Soybean | nucleus | 28.57 | 23.73 |
| KRG99080 | Soybean | nucleus | 27.41 | 23.44 |
| KRH74854 | Soybean | nucleus | 29.45 | 23.06 |
| KRH70719 | Soybean | nucleus | 28.86 | 22.4 |
Protein Annotations
| EntrezGene:100170718 | MapMan:15.5.17 | Gene3D:3.30.310.150 | EMBL:ACUP02008381 | EnsemblPlantsGene:GLYMA_13G279900 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | UniProt:I1M3B9 | InterPro:IPR003441 | InterPro:IPR036093 | EMBL:KF657307 |
| EnsemblPlants:KRH22137 | ProteinID:KRH22137 | ProteinID:KRH22137.1 | EMBL:KT031218 | InterPro:NAC-dom | InterPro:NAC_dom_sf |
| PFAM:PF02365 | PFscan:PS51005 | PANTHER:PTHR44908 | SUPFAM:SSF101941 | UniParc:UPI0001E247DD | SEG:seg |
Description
hypothetical protein
Coordinates
chr13:+:38124292..38125955
Molecular Weight (calculated)
38668.5 Da
IEP (calculated)
8.113
GRAVY (calculated)
-0.597
Length
343 amino acids
Sequence
(BLAST)
(BLAST)
001: MGVPEKDPLS QLSLPPGFRF YPTDEELLVQ YLCRKVAGHH FSLPIIAEID LYKFDPWVLP SKAIFGEKEW YFFSPRDRKY PNGSRPNRVA GSGYWKATGT
101: DKIITTEGRK VGIKKALVFY VGKAPKGTKT NWIMHEYRLL DSSRKNTGTK LDDWVLCRIY KKNSSAQKTA QNGVVPSNEH TQYSNGSSSS SSSQLEDVLE
201: SLPSIDERCF AMPRVNTLQQ QQHHEEKVNV QNLGAGGLMD WTNPSVLNSV ADFASGNNQV VQDQTQGMVN YNCNDLYVPT LCHLDSSVPL KMEEEVQSGV
301: RNQRVGNNNS WFLQNDFTQG FQNSVDTCGF KYPVQPVGFG FRN
101: DKIITTEGRK VGIKKALVFY VGKAPKGTKT NWIMHEYRLL DSSRKNTGTK LDDWVLCRIY KKNSSAQKTA QNGVVPSNEH TQYSNGSSSS SSSQLEDVLE
201: SLPSIDERCF AMPRVNTLQQ QQHHEEKVNV QNLGAGGLMD WTNPSVLNSV ADFASGNNQV VQDQTQGMVN YNCNDLYVPT LCHLDSSVPL KMEEEVQSGV
301: RNQRVGNNNS WFLQNDFTQG FQNSVDTCGF KYPVQPVGFG FRN
001: MGLQELDPLA QLSLPPGFRF YPTDEELMVE YLCRKAAGHD FSLQLIAEID LYKFDPWVLP SKALFGEKEW YFFSPRDRKY PNGSRPNRVA GSGYWKATGT
101: DKVISTEGRR VGIKKALVFY IGKAPKGTKT NWIMHEYRLI EPSRRNGSTK LDDWVLCRIY KKQTSAQKQA YNNLMTSGRE YSNNGSSTSS SSHQYDDVLE
201: SLHEIDNRSL GFAAGSSNAL PHSHRPVLTN HKTGFQGLAR EPSFDWANLI GQNSVPELGL SHNVPSIRYG DGGTQQQTEG IPRFNNNSDV SANQGFSVDP
301: VNGFGYSGQQ SSGFGFI
101: DKVISTEGRR VGIKKALVFY IGKAPKGTKT NWIMHEYRLI EPSRRNGSTK LDDWVLCRIY KKQTSAQKQA YNNLMTSGRE YSNNGSSTSS SSHQYDDVLE
201: SLHEIDNRSL GFAAGSSNAL PHSHRPVLTN HKTGFQGLAR EPSFDWANLI GQNSVPELGL SHNVPSIRYG DGGTQQQTEG IPRFNNNSDV SANQGFSVDP
301: VNGFGYSGQQ SSGFGFI
Arabidopsis Description
NAC055NAC3 [Source:UniProtKB/TrEMBL;Acc:A0A178VLD3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.