CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH70719	Soybean	nucleus	92.47	91.63
KRG99080	Soybean	nucleus	63.7	69.58
KRH45921	Soybean	nucleus	64.84	68.77
KRG93526	Soybean	nucleus	45.89	54.77
KRH32801	Soybean	nucleus	15.53	53.12
KRH18479	Soybean	nucleus	45.21	52.11
KRH32805	Soybean	nucleus	15.98	51.47
TraesCS5A01G228000.1	Wheat	nucleus	43.84	48.73
TraesCS5D01G239600.1	Wheat	nucleus	43.61	48.48
TraesCS5B01G226800.1	Wheat	nucleus	43.61	48.48
KRH57817	Soybean	nucleus	17.58	43.5
KRH50570	Soybean	nucleus	22.37	42.06
KRH26008	Soybean	nucleus	16.89	41.11
KRG98971	Soybean	nucleus	27.4	39.47
KRH46012	Soybean	nucleus	27.17	39.14
KRH73618	Soybean	cytosol	28.08	38.44
KRH14512	Soybean	nucleus	28.31	38.04
KRH13702	Soybean	nucleus	27.4	37.74
KRH70773	Soybean	cytosol	23.29	36.56
KRH74907	Soybean	nucleus	23.06	36.2
KRG89575	Soybean	nucleus	22.37	35.0
KRH17977	Soybean	nucleus	21.0	34.33
KRH24118	Soybean	cytosol	22.37	33.0
KRH16387	Soybean	nucleus	21.0	32.86
KRH29090	Soybean	nucleus	22.37	32.45
KRH63977	Soybean	nucleus	20.78	31.27
KRH53959	Soybean	nucleus	20.78	30.85
KRH53247	Soybean	nucleus	21.0	30.77
KRG94779	Soybean	nucleus	23.29	30.36
KRH26054	Soybean	nucleus	24.89	30.28
KRH59618	Soybean	nucleus	20.55	30.2
KRH64668	Soybean	nucleus	20.55	30.0
KRH06741	Soybean	nucleus	23.97	29.75
KRH55357	Soybean	nucleus	24.89	29.62
KRH67671	Soybean	cytosol	19.41	29.62
KRH22137	Soybean	nucleus	23.06	29.45
KRH70122	Soybean	nucleus	23.52	29.1
KRH55355	Soybean	nucleus	22.37	29.08
KRH49988	Soybean	nucleus	23.97	29.01
KRH10810	Soybean	nucleus	23.29	28.81
KRH27201	Soybean	nucleus	22.6	28.7
KRH08465	Soybean	nucleus	23.74	28.65
KRH21510	Soybean	nucleus	23.74	28.65
KRH26056	Soybean	nucleus	22.15	28.53
KRH22138	Soybean	nucleus	24.2	28.27
KRH27199	Soybean	nucleus	23.52	27.47
KRG95963	Soybean	nucleus	20.78	27.0
KRH22920	Soybean	nucleus	21.23	26.65
KRH26398	Soybean	nucleus	21.23	26.65
KRH51263	Soybean	nucleus	23.97	26.25
KRH01889	Soybean	nucleus	23.97	26.05

Protein Annotations

EntrezGene:100170721	MapMan:15.5.17	Gene3D:3.30.310.150	EMBL:ACUP02000080	EnsemblPlantsGene:GLYMA_01G046800	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	UniProt:I1J5Q4	InterPro:IPR003441	InterPro:IPR036093	EnsemblPlants:KRH74854
ProteinID:KRH74854	ProteinID:KRH74854.1	InterPro:NAC-dom	InterPro:NAC_dom_sf	PFAM:PF02365	PFscan:PS51005
PANTHER:PTHR44574	PANTHER:PTHR44574:SF1	SUPFAM:SSF101941	UniParc:UPI0002337305	SEG:seg	:

Description

hypothetical protein

Coordinates

chr1:+:5448322..5450706

Molecular Weight (calculated)

49725.6 Da

IEP (calculated)

6.263

GRAVY (calculated)

-0.568

Length

438 amino acids

Sequence
(BLAST)

001: MMEERNNDAE KLDEVMLPGF RFHPTDEELV GFYLKRKIQQ RPLTIELIKQ LDIYKFDPWD LPKLATTGEK EWYFYCPRDR KYRNSARPNR VTGAGFWKAT
101: GTDRPIYSSE GSKCIGLKKS LVFYKGRAAK GVKTDWMMHE FRLPSLTDSL SPKYIDKTIP ANESWAICRI FKKINATAQR TLSQSWASSL PPDTRTSDHH
201: IQTKDQDSTT QFCSDNMPMT NKTTLTSQFC NNNYNDSQPL PTNSSSSPLC PLDVASYKSI INPLLYKAFD HFPISNEDLR TSLLFSPPFE TSDANPKSTM
301: VDVSSMLLSL PSSVLGDFNK TTSEDTNTAS NFGVLQEHCS GYPIPFLPEM QTTFGNQQQQ YCDNINALVK GPNVNVPRVD DQELELETVV QRSIGFPLSA
401: TMPLNIVDAW KSNNLLWDTS SFPCDMPSSY YSTTKCYT

Best Arabidopsis Sequence Match ( AT1G26870.1 )
(BLAST)

001: MGDRNNDGDQ KMEDVLLPGF RFHPTDEELV SFYLKRKVQH NPLSIELIRQ LDIYKYDPWD LPKFAMTGEK EWYFYCPRDR KYRNSSRPNR VTGAGFWKAT
101: GTDRPIYSSE GNKCIGLKKS LVFYKGRAAK GVKTDWMMHE FRLPSLSEPS PPSKRFFDSP VSPNDSWAIC RIFKKTNTTT LRALSHSFVS SLPPETSTDT
201: MSNQKQSNTY HFSSDKILKP SSHFQFHHEN MNTPKTSNST TPSVPTISPF SYLDFTSYDK PTNVFNPVSC LDQQYLTNLF LATQETQPQF PRLPSSNEIP
301: SFLLNTSSDS TFLGEFTSHI DLSAVLAQEQ CPPLVSLPQE YQETGFEGNG IMKNMRGSNE DHLGDHCDTL RFDDFTSTIN ENHRHHQDLK QNMTLLESYY
401: SSLSSINSDL PACFSSTT

Arabidopsis Description

FEZProtein FEZ [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVH0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.