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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 5
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:nucleus
Any Predictor:mitochondrion, nucleus
BaCelLo:nucleus
MultiLoc:nucleus
Plant-mPloc:nucleus
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:nucleus
nucleus: 21132161
msms PMID: 21132161 doi
B Cooper, KB Campbell, J Feng, WM Garrett, R Frederick
Soybean Genomics and Improvement Laboratory, USDA-ARS, Beltsville, MD 20705, USA. bret.cooper@ars.usda.gov
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH01889 Soybean nucleus 93.25 92.56
GSMUA_Achr5P17060_001 Banana nucleus 38.5 54.61
GSMUA_Achr10P... Banana nucleus 44.5 54.43
GSMUA_Achr11P... Banana nucleus 42.75 53.77
GSMUA_Achr10P... Banana nucleus 45.0 53.1
KRH32801 Soybean nucleus 16.75 52.34
GSMUA_Achr7P23650_001 Banana nucleus 45.25 52.01
GSMUA_Achr11P... Banana nucleus 43.5 51.94
GSMUA_Achr3P21690_001 Banana nucleus 45.75 51.4
PGSC0003DMT400047021 Potato nucleus 51.5 50.99
KRH32805 Soybean nucleus 17.25 50.74
Solyc01g102740.2.1 Tomato nucleus 52.25 50.61
VIT_12s0035g02020.t01 Wine grape nucleus 57.5 50.44
CDY03050 Canola nucleus 49.5 47.83
Bra017416.1-P Field mustard nucleus 47.5 47.74
AT2G02450.2 Thale cress nucleus 49.25 47.58
CDY04129 Canola nucleus 48.25 47.3
CDY17437 Canola nucleus 48.0 47.29
CDY17595 Canola nucleus 49.25 47.24
Bra026595.1-P Field mustard nucleus 46.5 47.21
Bra024818.1-P Field mustard nucleus 48.0 47.17
CDY15835 Canola nucleus 47.75 46.93
CDY09368 Canola nucleus 47.5 46.8
TraesCS3D01G398200.1 Wheat nucleus 45.0 43.9
Zm00001d049687_P001 Maize nucleus 40.25 43.75
EES13251 Sorghum mitochondrion, nucleus 40.75 43.58
TraesCS3A01G403300.1 Wheat nucleus 44.75 43.45
TraesCS3B01G436900.1 Wheat nucleus 44.25 42.96
HORVU3Hr1G090440.4 Barley cytosol, nucleus, peroxisome 44.0 42.93
TraesCS1B01G272600.1 Wheat nucleus 41.5 42.89
TraesCS7A01G318500.1 Wheat nucleus 41.25 42.53
TraesCS1D01G261800.1 Wheat nucleus 41.25 42.42
KRH57817 Soybean nucleus 18.75 42.37
HORVU1Hr1G064300.1 Barley nucleus 41.5 42.24
TraesCS1A01G261800.1 Wheat nucleus 41.25 42.09
TraesCS7D01G315100.1 Wheat nucleus 41.0 42.05
HORVU7Hr1G076250.1 Barley nucleus 41.0 41.94
TraesCS7B01G219400.1 Wheat nucleus 40.75 41.9
Zm00001d035076_P001 Maize mitochondrion, nucleus 37.5 41.9
Os01t0888300-01 Rice nucleus 45.25 40.04
Zm00001d010239_P001 Maize nucleus 41.25 39.66
EES19541 Sorghum nucleus 41.5 39.62
Zm00001d038207_P001 Maize nucleus 41.5 39.52
KRH26008 Soybean nucleus 17.75 39.44
EES01882 Sorghum nucleus 43.5 39.37
Zm00001d042580_P001 Maize nucleus 43.75 39.15
KRH50570 Soybean nucleus 20.75 35.62
Os05t0418800-00 Rice plastid 43.25 35.6
KRH24118 Soybean cytosol 25.5 34.34
KRH29090 Soybean nucleus 25.75 34.11
KRG98971 Soybean nucleus 25.0 32.89
KRH46012 Soybean nucleus 25.0 32.89
KRH17977 Soybean nucleus 21.75 32.46
KRH73618 Soybean cytosol 25.5 31.88
KRH53959 Soybean nucleus 23.5 31.86
KRH63977 Soybean nucleus 23.0 31.62
KRH53247 Soybean nucleus 23.5 31.44
KRH16387 Soybean nucleus 22.0 31.43
KRH13702 Soybean nucleus 24.75 31.13
KRH59618 Soybean nucleus 22.75 30.54
KRH14512 Soybean nucleus 24.75 30.37
KRH64668 Soybean nucleus 22.5 30.0
KRG89575 Soybean nucleus 20.75 29.64
KRH22137 Soybean nucleus 25.0 29.15
KRH26056 Soybean nucleus 24.75 29.12
KRH27201 Soybean nucleus 25.0 28.99
KRH67671 Soybean cytosol 20.75 28.92
KRH55355 Soybean nucleus 24.25 28.78
KRH70773 Soybean cytosol 20.0 28.67
KRG93526 Soybean nucleus 26.25 28.61
KRH74907 Soybean nucleus 19.75 28.32
KRH18479 Soybean nucleus 25.25 26.58
KRG94779 Soybean nucleus 22.0 26.19
KRH26054 Soybean nucleus 23.25 25.83
KRH06741 Soybean nucleus 22.75 25.78
KRH10810 Soybean nucleus 22.75 25.71
KRG95963 Soybean nucleus 21.5 25.52
KRH26398 Soybean nucleus 22.25 25.5
KRH49988 Soybean nucleus 23.0 25.41
KRH22138 Soybean nucleus 23.75 25.33
KRH55357 Soybean nucleus 23.25 25.27
KRH45921 Soybean nucleus 26.0 25.18
KRH21510 Soybean nucleus 22.75 25.07
KRH27199 Soybean nucleus 23.5 25.07
KRH08465 Soybean nucleus 22.5 24.79
KRG99080 Soybean nucleus 24.75 24.69
KRH22920 Soybean nucleus 21.5 24.64
KRH70122 Soybean nucleus 21.75 24.58
KRH74854 Soybean nucleus 26.25 23.97
KRH70719 Soybean nucleus 25.75 23.3
Protein Annotations
EntrezGene:100812779MapMan:15.5.17Gene3D:3.30.310.150EMBL:ACUP02004733EnsemblPlantsGene:GLYMA_07G271100GO:GO:0003674
GO:GO:0003676GO:GO:0003677GO:GO:0005488GO:GO:0005575GO:GO:0005622GO:GO:0005623
GO:GO:0005634GO:GO:0006139GO:GO:0006351GO:GO:0006355GO:GO:0008150GO:GO:0008152
GO:GO:0009058GO:GO:0009987UniProt:I1KNQ2InterPro:IPR003441InterPro:IPR036093EnsemblPlants:KRH51263
ProteinID:KRH51263ProteinID:KRH51263.1InterPro:NAC-domInterPro:NAC_dom_sfPFAM:PF02365PFscan:PS51005
PANTHER:PTHR45123PANTHER:PTHR45123:SF2SUPFAM:SSF101941UniParc:UPI00023391DBSEG:seg:
Description
hypothetical protein
Coordinates
chr7:+:44366835..44369248
Molecular Weight (calculated)
45502.5 Da
IEP (calculated)
7.242
GRAVY (calculated)
-0.693
Length
400 amino acids
Sequence
(BLAST)
001: MAIAAANSSP TMSLSHSQSQ EDATTNDNKP VVVDDDHEHD MVMPGFRFHP TEEELVEFYL RRKVEGKRFN VELITFLDLY RYDPWELPAL AAIGEKEWYF
101: YVPRDRKYRN GDRPNRVTTS GYWKATGADR MIRTENFRSI GLKKTLVFYS GKAPKGIRTS WIMNEYRLPQ HETERYQKAE ISLCRVYKRA GVEDHPSLPR
201: CLPTRPSSSS RASSDHINNN KSTKHNEMVQ HHNINMGFMG QSKPPTTEHI VDKINESEAS SDVNTTLGLS KYNAYRAATM ALPVVPMDEE ALMMMQQSKQ
301: AAAAAAHVPT IFSAGPSSSN NSGVVNMDDL NRLMSYQHQY YNVQSQSHPN QFSTLLMQPS PIVSLSSLPN PLPPTFSDRL WDWNPIPESP SQEYSNISFK
Best Arabidopsis Sequence Match ( AT2G02450.2 )
(BLAST)
001: MAIVSSTTSI IPMSNQVNNN EKGIEDNDHR GGQESHVQNE DEADDHDHDM VMPGFRFHPT EEELIEFYLR RKVEGKRFNV ELITFLDLYR YDPWELPAMA
101: AIGEKEWYFY VPRDRKYRNG DRPNRVTTSG YWKATGADRM IRSETSRPIG LKKTLVFYSG KAPKGTRTSW IMNEYRLPHH ETEKYQKAEI SLCRVYKRPG
201: VEDHPSVPRS LSTRHHNHNS STSSRLALRQ QQHHSSSSNH SDNNLNNNNN INNLEKLSTE YSGDGSTTTT TTNSNSDVTI ALANQNIYRP MPYDTSNNTL
301: IVSTRNHQDD DETAIVDDLQ RLVNYQISDG GNINHQYFQI AQQFHHTQQQ NANANALQLV AAATTATTLM PQTQAALAMN MIPAGTIPNN ALWDMWNPIV
401: PDGNRDHYTN IPFK
Arabidopsis Description
NAC035NAC domain-containing protein 35 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVP8]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.