CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, nucleus

Predictor Summary:

nucleus 4
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d049687_P001	Maize	nucleus	91.18	92.66
Zm00001d035076_P001	Maize	mitochondrion, nucleus	84.49	88.27
TraesCS7A01G318500.1	Wheat	nucleus	58.82	56.7
TraesCS7B01G219400.1	Wheat	nucleus	58.82	56.56
HORVU7Hr1G076250.1	Barley	nucleus	59.09	56.52
TraesCS7D01G315100.1	Wheat	nucleus	58.82	56.41
GSMUA_Achr5P17060_001	Banana	nucleus	39.84	52.84
GSMUA_Achr11P...	Banana	nucleus	44.92	52.83
GSMUA_Achr10P...	Banana	nucleus	47.06	51.92
GSMUA_Achr3P21690_001	Banana	nucleus	48.4	50.84
GSMUA_Achr10P...	Banana	nucleus	44.38	50.76
GSMUA_Achr11P...	Banana	nucleus	44.65	49.85
GSMUA_Achr7P23650_001	Banana	nucleus	45.45	48.85
KRH01889	Soybean	nucleus	44.65	41.44
KRH51263	Soybean	nucleus	43.58	40.75
EES19541	Sorghum	nucleus	44.92	40.1
Bra026595.1-P	Field mustard	nucleus	41.98	39.85
PGSC0003DMT400047021	Potato	nucleus	42.78	39.6
EES01882	Sorghum	nucleus	46.79	39.59
Bra017416.1-P	Field mustard	nucleus	41.71	39.2
CDY15835	Canola	nucleus	42.51	39.07
Solyc01g102740.2.1	Tomato	nucleus	42.78	38.74
CDY17437	Canola	nucleus	41.98	38.67
CDY09368	Canola	nucleus	41.98	38.67
Bra024818.1-P	Field mustard	nucleus	41.44	38.08
CDY04129	Canola	nucleus	41.44	37.99
AT2G02450.2	Thale cress	nucleus	41.71	37.68
CDY03050	Canola	nucleus	41.44	37.44
CDY17595	Canola	nucleus	41.44	37.17
VIT_12s0035g02020.t01	Wine grape	nucleus	44.38	36.4
KXG33829	Sorghum	nucleus	24.33	31.27
EER92917	Sorghum	nucleus	27.01	30.89
EER96087	Sorghum	nucleus	23.8	30.69
EES03797	Sorghum	nucleus	24.06	28.48
EES17466	Sorghum	nucleus	22.46	27.63
EES07261	Sorghum	nucleus	28.07	27.06
EER93215	Sorghum	nucleus	22.99	26.96
OQU89481	Sorghum	nucleus	28.61	26.55
EER95852	Sorghum	nucleus	24.06	26.24
EES13897	Sorghum	nucleus	26.47	25.78
EER93360	Sorghum	nucleus	24.87	25.14
KXG22031	Sorghum	nucleus	22.46	24.63
KXG20943	Sorghum	nucleus, plastid	25.4	24.61
OQU83033	Sorghum	nucleus	23.53	22.92
EER92326	Sorghum	nucleus	22.73	22.37
KXG32136	Sorghum	plastid	22.19	21.84
EER99985	Sorghum	nucleus	20.59	21.75
EER99924	Sorghum	cytosol, nucleus, plastid	22.19	21.39
OQU90111	Sorghum	nucleus	22.99	20.57
EES07907	Sorghum	plastid	20.32	18.91
EES16571	Sorghum	nucleus	20.86	18.18

Protein Annotations

MapMan:15.5.17	Gene3D:3.30.310.150	EntrezGene:8068557	UniProt:C5YM02	EnsemblPlants:EES13251	ProteinID:EES13251
ProteinID:EES13251.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR003441	InterPro:IPR036093
InterPro:NAC-dom	InterPro:NAC_dom_sf	PFAM:PF02365	PFscan:PS51005	PANTHER:PTHR45123	PANTHER:PTHR45123:SF1
EnsemblPlantsGene:SORBI_3007G015500	SUPFAM:SSF101941	unigene:Sbi.7555	UniParc:UPI0001A87743	RefSeq:XP_002443756.1	SEG:seg

Description

hypothetical protein

Coordinates

chr7:+:1360032..1363137

Molecular Weight (calculated)

41433.0 Da

IEP (calculated)

9.824

GRAVY (calculated)

-0.661

Length

374 amino acids

Sequence
(BLAST)

001: MTQAGRRRSS STMGGASGDH HQQQQQHGGG DDGQLQQGGG GDMVMPGFRF HPTEEELIDF YLRRRVEGKR FNIELINLVD LYRYDPWDLP ALASIGDKEW
101: YFYVPRDRKY RNGDRPNRVT PSGYWKATGA DRTVYVEVKR PIGLKKTLVF YVGKAPKGLR SSWIMNEYRL PSGEADRYQK EISLCKVYKR PGIEDNFHLS
201: TTTTRSSSSK AAATMEKKHH RTAASPRLAP MFDGGHSSVH MNKPYSGANT TIAMTSSAAA RAATMAPQTS MFLSAPSLSS TTSTEEDGTS LYHMKGANPP
301: MLTSSTHALL NANSATMATI PIDELSRAIG SYNSQGNPNQ PLPSQGPLLP FPSMEKIWDW NPLLESPKVC TSFK

Best Arabidopsis Sequence Match ( AT2G02450.2 )
(BLAST)

001: MAIVSSTTSI IPMSNQVNNN EKGIEDNDHR GGQESHVQNE DEADDHDHDM VMPGFRFHPT EEELIEFYLR RKVEGKRFNV ELITFLDLYR YDPWELPAMA
101: AIGEKEWYFY VPRDRKYRNG DRPNRVTTSG YWKATGADRM IRSETSRPIG LKKTLVFYSG KAPKGTRTSW IMNEYRLPHH ETEKYQKAEI SLCRVYKRPG
201: VEDHPSVPRS LSTRHHNHNS STSSRLALRQ QQHHSSSSNH SDNNLNNNNN INNLEKLSTE YSGDGSTTTT TTNSNSDVTI ALANQNIYRP MPYDTSNNTL
301: IVSTRNHQDD DETAIVDDLQ RLVNYQISDG GNINHQYFQI AQQFHHTQQQ NANANALQLV AAATTATTLM PQTQAALAMN MIPAGTIPNN ALWDMWNPIV
401: PDGNRDHYTN IPFK

Arabidopsis Description

NAC035NAC domain-containing protein 35 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVP8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.