CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 3
plastid 7

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os11t0126900-01	Rice	nucleus	32.09	75.44
Os12t0123700-01	Rice	nucleus	56.72	58.02
TraesCS5A01G143200.1	Wheat	nucleus	51.74	57.94
TraesCS5D01G148800.1	Wheat	nucleus	50.75	57.63
TraesCS5B01G142100.1	Wheat	nucleus	50.5	57.34
EES16571	Sorghum	nucleus	59.7	55.94
HORVU5Hr1G045650.7	Barley	plastid	51.99	51.1
Zm00001d023294_P001	Maize	nucleus	55.47	46.95
EER96087	Sorghum	nucleus	29.35	40.69
KXG33829	Sorghum	nucleus	26.87	37.11
EES03797	Sorghum	nucleus	28.86	36.71
KXG32136	Sorghum	plastid	34.08	36.05
EER93215	Sorghum	nucleus	28.36	35.74
EER99924	Sorghum	cytosol, nucleus, plastid	33.33	34.54
EER92326	Sorghum	nucleus	31.34	33.16
KXG22031	Sorghum	nucleus	27.11	31.96
EER99985	Sorghum	nucleus	28.11	31.92
OQU90111	Sorghum	nucleus	32.59	31.34
OQU83033	Sorghum	nucleus	25.87	27.08
EER92917	Sorghum	nucleus	20.9	25.69
EES17466	Sorghum	nucleus	19.15	25.33
EES07261	Sorghum	nucleus	22.39	23.2
EER95852	Sorghum	nucleus	19.4	22.74
EER93360	Sorghum	nucleus	20.9	22.7
OQU89481	Sorghum	nucleus	22.39	22.33
EES13897	Sorghum	nucleus	20.9	21.88
EES13251	Sorghum	mitochondrion, nucleus	18.91	20.32
KXG20943	Sorghum	nucleus, plastid	19.15	19.95
EES19541	Sorghum	nucleus	19.4	18.62
EES01882	Sorghum	nucleus	19.9	18.1

Protein Annotations

MapMan:15.5.17	Gene3D:3.30.310.150	EntrezGene:8083036	ProteinID:AQY17421.1	UniProt:C5Y3M1	EnsemblPlants:EES07907
ProteinID:EES07907	ProteinID:EES07907.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR003441
InterPro:IPR036093	InterPro:NAC-dom	InterPro:NAC_dom_sf	PFAM:PF02365	PFscan:PS51005	PANTHER:PTHR45430
EnsemblPlantsGene:SORBI_3005G018500	SUPFAM:SSF101941	unigene:Sbi.1157	UniParc:UPI0001A860FD	RefSeq:XP_002448919.1	SEG:seg

Description

hypothetical protein

Coordinates

chr5:+:1666802..1668927

Molecular Weight (calculated)

44558.3 Da

IEP (calculated)

7.219

GRAVY (calculated)

-0.576

Length

402 amino acids

Sequence
(BLAST)

001: MAAAAMPSPS PSRSSSSCCR VAAVPNLNLP AGFRFHPTDE ELIVHYLMNQ AASIPCPVPI IAEVNIYQCN PWDLPAKALF GESEWYFFSP RDRKYPNGAR
101: PNRAAGSGYW KATGTDKAIM STPTGQNIGV KKALVFYGGR PPRGVKTDWI MHEYRLVTAD ADGKTTAAKR RGGSMRLDDW VLCRIHKKSN DFQFQLLSEQ
201: EQDGSSTVEQ ESPKSESLEQ EQFQFQLHQT TTLTMTKSCS LTDLLNSIDY SALSQILADG PVDGNQEQLP QPQQNPPPLI YTTTTHETHQ ALINNYNNNN
301: NNNKLNNSHL NYLPHTNAAC SDYVVVANNN YDNGVNKRKR MMMMTAAGAM DEGAGSNGFS KKLKAVLPTD SKNSSYCNQQ VVDTSGLFQY SSLLSYPFLE
401: MQ

Best Arabidopsis Sequence Match ( AT1G69490.1 )
(BLAST)

001: MEVTSQSTLP PGFRFHPTDE ELIVYYLRNQ TMSKPCPVSI IPEVDIYKFD PWQLPEKTEF GENEWYFFSP RERKYPNGVR PNRAAVSGYW KATGTDKAIH
101: SGSSNVGVKK ALVFYKGRPP KGIKTDWIMH EYRLHDSRKA STKRNGSMRL DEWVLCRIYK KRGASKLLNE QEGFMDEVLM EDETKVVVNE AERRTEEEIM
201: MMTSMKLPRT CSLAHLLEMD YMGPVSHIDN FSQFDHLHQP DSESSWFGDL QFNQDEILNH HRQAMFKF

Arabidopsis Description

NAC029NAP [Source:UniProtKB/TrEMBL;Acc:A0A178W8K0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.