Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d018773_P001 | Maize | nucleus | 87.46 | 83.8 |
| Zm00001d007850_P001 | Maize | nucleus | 58.02 | 79.28 |
| HORVU5Hr1G099470.2 | Barley | cytosol | 57.14 | 58.16 |
| TraesCS5D01G421100.1 | Wheat | nucleus | 56.56 | 56.89 |
| TraesCS5A01G411900.1 | Wheat | nucleus | 56.56 | 56.56 |
| TraesCS5B01G415600.1 | Wheat | nucleus | 56.27 | 54.99 |
| TraesCS5B01G415700.1 | Wheat | nucleus | 55.98 | 54.86 |
| TraesCS4B01G384700.1 | Wheat | cytoskeleton, cytosol, nucleus | 54.23 | 54.71 |
| TraesCS5A01G411800.1 | Wheat | nucleus | 55.98 | 54.55 |
| HORVU5Hr1G099460.1 | Barley | nucleus | 54.52 | 54.05 |
| TraesCS5D01G420800.1 | Wheat | nucleus | 56.85 | 53.57 |
| EER93360 | Sorghum | nucleus | 57.43 | 53.24 |
| GSMUA_Achr7P00860_001 | Banana | nucleus | 40.52 | 53.05 |
| TraesCS5B01G415400.1 | Wheat | nucleus | 57.73 | 52.52 |
| TraesCS5A01G411700.1 | Wheat | nucleus | 57.14 | 51.99 |
| VIT_19s0027g00880.t01 | Wine grape | nucleus | 31.49 | 50.47 |
| GSMUA_Achr4P23030_001 | Banana | nucleus | 36.44 | 50.0 |
| VIT_12s0028g00860.t01 | Wine grape | nucleus | 43.44 | 50.0 |
| TraesCS5D01G421000.1 | Wheat | nucleus | 55.39 | 49.48 |
| VIT_19s0027g00870.t01 | Wine grape | nucleus | 39.65 | 49.1 |
| GSMUA_Achr5P02170_001 | Banana | nucleus | 43.15 | 48.21 |
| VIT_19s0027g00860.t01 | Wine grape | nucleus | 38.48 | 47.83 |
| HORVU5Hr1G099390.2 | Barley | nucleus | 39.94 | 47.4 |
| Bra000282.1-P | Field mustard | nucleus | 37.03 | 46.69 |
| AT2G43000.1 | Thale cress | nucleus | 37.32 | 46.55 |
| KRH46012 | Soybean | nucleus | 40.52 | 45.72 |
| KRH73618 | Soybean | cytosol | 42.57 | 45.62 |
| Bra037743.1-P | Field mustard | nucleus | 36.73 | 45.49 |
| CDY30373 | Canola | nucleus | 36.73 | 45.49 |
| PGSC0003DMT400090327 | Potato | cytosol | 37.61 | 45.42 |
| KRG98971 | Soybean | nucleus | 40.23 | 45.39 |
| CDY53654 | Canola | nucleus | 36.73 | 45.16 |
| KRH14512 | Soybean | nucleus | 42.86 | 45.09 |
| VIT_19s0027g00910.t01 | Wine grape | cytoskeleton, cytosol, nucleus | 38.78 | 45.08 |
| VIT_19s0027g00840.t01 | Wine grape | nucleus | 37.32 | 45.07 |
| CDY55499 | Canola | nucleus | 36.44 | 44.8 |
| PGSC0003DMT400003082 | Potato | nucleus | 36.73 | 44.68 |
| Bra004736.1-P | Field mustard | nucleus | 36.44 | 44.64 |
| Solyc05g021090.2.1 | Tomato | nucleus | 36.15 | 44.44 |
| CDY14865 | Canola | nucleus | 35.86 | 44.4 |
| Solyc02g069960.2.1 | Tomato | nucleus | 39.94 | 44.19 |
| PGSC0003DMT400054407 | Potato | nucleus | 39.36 | 42.99 |
| CDY64562 | Canola | nucleus | 36.44 | 42.52 |
| EES17466 | Sorghum | nucleus | 37.32 | 42.11 |
| CDX82569 | Canola | nucleus | 37.03 | 42.05 |
| CDY43391 | Canola | nucleus | 36.15 | 42.03 |
| CDY24238 | Canola | nucleus | 37.61 | 42.02 |
| Bra039353.1-P | Field mustard | nucleus | 37.32 | 41.69 |
| CDY60122 | Canola | nucleus | 39.36 | 41.28 |
| AT3G12910.1 | Thale cress | nucleus | 36.44 | 41.25 |
| KRH13702 | Soybean | nucleus | 38.19 | 41.2 |
| Bra034719.1-P | Field mustard | nucleus | 39.07 | 40.98 |
| Solyc07g045030.2.1 | Tomato | nucleus | 39.36 | 40.79 |
| PGSC0003DMT400049124 | Potato | nucleus | 28.86 | 39.6 |
| CDY23551 | Canola | nucleus | 38.78 | 35.47 |
| EES07261 | Sorghum | nucleus | 34.11 | 30.15 |
| EER92917 | Sorghum | nucleus | 28.28 | 29.66 |
| KXG33829 | Sorghum | nucleus | 24.78 | 29.21 |
| EES13897 | Sorghum | nucleus | 32.65 | 29.17 |
| EER96087 | Sorghum | nucleus | 24.49 | 28.97 |
| EES03797 | Sorghum | nucleus | 25.66 | 27.85 |
| EER93215 | Sorghum | nucleus | 25.36 | 27.27 |
| OQU89481 | Sorghum | nucleus | 30.9 | 26.3 |
| KXG22031 | Sorghum | nucleus | 25.07 | 25.22 |
| CDY42810 | Canola | nucleus | 37.03 | 24.9 |
| CDX83510 | Canola | nucleus | 36.73 | 24.71 |
| EES19541 | Sorghum | nucleus | 29.45 | 24.11 |
| EES13251 | Sorghum | mitochondrion, nucleus | 26.24 | 24.06 |
| EER92326 | Sorghum | nucleus | 26.53 | 23.95 |
| KXG32136 | Sorghum | plastid | 26.53 | 23.95 |
| EER99924 | Sorghum | cytosol, nucleus, plastid | 25.95 | 22.94 |
| EER99985 | Sorghum | nucleus | 23.62 | 22.88 |
| KXG20943 | Sorghum | nucleus, plastid | 25.36 | 22.54 |
| OQU90111 | Sorghum | nucleus | 27.41 | 22.49 |
| OQU83033 | Sorghum | nucleus | 24.78 | 22.14 |
| EES01882 | Sorghum | nucleus | 27.99 | 21.72 |
| EES07907 | Sorghum | plastid | 22.74 | 19.4 |
| EES16571 | Sorghum | nucleus | 23.91 | 19.11 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | EntrezGene:8086392 | UniProt:C5X9F0 | EnsemblPlants:EER95852 | ProteinID:EER95852 |
| ProteinID:EER95852.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR003441 | InterPro:IPR036093 |
| InterPro:NAC-dom | InterPro:NAC_dom_sf | PFAM:PF02365 | PFscan:PS51005 | PANTHER:PTHR44543 | PANTHER:PTHR44543:SF3 |
| EnsemblPlantsGene:SORBI_3002G029400 | SUPFAM:SSF101941 | UniParc:UPI0001A82E99 | RefSeq:XP_002459331.1 | SEG:seg | : |
Description
hypothetical protein
Coordinates
chr2:+:2727426..2728964
Molecular Weight (calculated)
38217.4 Da
IEP (calculated)
5.269
GRAVY (calculated)
-0.604
Length
343 amino acids
Sequence
(BLAST)
(BLAST)
001: MAKEIVMAGE HGEGEEVVLV EDEEEEEDML PGFRFHPTDE ELVTFYLRRK VAGKRLSIEI IKDFDIYKHD PWDLPKSSSI LGEKEWYFFC LRGRKYRNSI
101: RPNRVTGSGF WKATGIDRPI HSAASGRAGD PIGLKKSLVF YRGSAGKGTK TEWMMHEFRL PPRAESAHTS PSEQEAEVWT ICRIFRRNFT YKKHPQQQQI
201: AGSSKVSAAA TAAVVTTQPG ESSSVTGSLE SDTGDEYTND LPQPTQAPAI VDGYDYDYGY GYDQQQGQWN SHALHAAATA PLPSPTMAAF HHSVLSSPAA
301: GGGLDDMYYK DGSSSWDDIG RMVMELTDPS PGVFSFYDTR SYV
101: RPNRVTGSGF WKATGIDRPI HSAASGRAGD PIGLKKSLVF YRGSAGKGTK TEWMMHEFRL PPRAESAHTS PSEQEAEVWT ICRIFRRNFT YKKHPQQQQI
201: AGSSKVSAAA TAAVVTTQPG ESSSVTGSLE SDTGDEYTND LPQPTQAPAI VDGYDYDYGY GYDQQQGQWN SHALHAAATA PLPSPTMAAF HHSVLSSPAA
301: GGGLDDMYYK DGSSSWDDIG RMVMELTDPS PGVFSFYDTR SYV
001: MSGEGNLGKD HEEENEAPLP GFRFHPTDEE LLGYYLRRKV ENKTIKLELI KQIDIYKYDP WDLPRVSSVG EKEWYFFCMR GRKYRNSVRP NRVTGSGFWK
101: ATGIDKPVYS NLDCVGLKKS LVYYLGSAGK GTKTDWMMHE FRLPSTTKTD SPAQQAEVWT LCRIFKRVTS QRNPTILPPN RKPVITLTDT CSKTSSLDSD
201: HTSHRTVDSM SHEPPLPQPQ NPYWNQHIVG FNQPTYTGND NNLLMSFWNG NGGDFIGDSA SWDELRSVID GNTKP
101: ATGIDKPVYS NLDCVGLKKS LVYYLGSAGK GTKTDWMMHE FRLPSTTKTD SPAQQAEVWT LCRIFKRVTS QRNPTILPPN RKPVITLTDT CSKTSSLDSD
201: HTSHRTVDSM SHEPPLPQPQ NPYWNQHIVG FNQPTYTGND NNLLMSFWNG NGGDFIGDSA SWDELRSVID GNTKP
Arabidopsis Description
JUB1Transcription factor JUNGBRUNNEN 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SK55]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.