CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU6Hr1G075830.1	Barley	nucleus	60.31	89.66
Os02t0745250-00	Rice	nucleus	42.53	88.24
TraesCS6B01G335700.1	Wheat	nucleus	83.51	83.29
TraesCS6A01G307200.1	Wheat	nucleus	82.99	82.78
TraesCS6D01G286300.1	Wheat	nucleus	82.73	82.31
Zm00001d018038_P001	Maize	nucleus	94.33	74.24
OQU89481	Sorghum	nucleus	51.29	49.38
EES13897	Sorghum	nucleus	48.2	48.7
CDY65270	Canola	nucleus	47.16	46.33
Bra016294.1-P	Field mustard	nucleus	47.68	44.9
CDY46433	Canola	nucleus	47.42	44.66
AT1G26870.1	Thale cress	nucleus	47.68	44.26
Bra024677.1-P	Field mustard	nucleus	45.88	42.79
CDY01755	Canola	nucleus	43.3	42.32
CDX95910	Canola	nucleus	44.59	42.3
Bra004403.1-P	Field mustard	nucleus	44.07	42.22
EES17466	Sorghum	nucleus	28.09	35.86
EER95852	Sorghum	nucleus	30.15	34.11
EER93360	Sorghum	nucleus	32.22	33.78
EER92917	Sorghum	nucleus	27.06	32.11
EES03797	Sorghum	nucleus	25.0	30.7
KXG33829	Sorghum	nucleus	22.94	30.58
EES13251	Sorghum	mitochondrion, nucleus	27.06	28.07
EER96087	Sorghum	nucleus	20.88	27.93
EER93215	Sorghum	nucleus	22.68	27.59
KXG22031	Sorghum	nucleus	23.71	26.98
EES19541	Sorghum	nucleus	28.09	26.01
KXG32136	Sorghum	plastid	25.0	25.53
EES01882	Sorghum	nucleus	28.35	24.89
EER99924	Sorghum	cytosol, nucleus, plastid	24.48	24.48
EER92326	Sorghum	nucleus	23.97	24.47
OQU90111	Sorghum	nucleus	26.03	24.16
EER99985	Sorghum	nucleus	21.91	24.01
OQU83033	Sorghum	nucleus	23.2	23.44
EES07907	Sorghum	plastid	23.2	22.39
KXG20943	Sorghum	nucleus, plastid	22.16	22.28
EES16571	Sorghum	nucleus	22.68	20.51

Protein Annotations

MapMan:15.5.17	Gene3D:3.30.310.150	EntrezGene:8066436	UniProt:C5XYT2	EnsemblPlants:EES07261	ProteinID:EES07261
ProteinID:EES07261.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355
GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009719	GO:GO:0009733
GO:GO:0009987	GO:GO:0045770	GO:GO:0048103	GO:GO:0048829	InterPro:IPR003441	InterPro:IPR036093
InterPro:NAC-dom	InterPro:NAC_dom_sf	PFAM:PF02365	PFscan:PS51005	PANTHER:PTHR44574	PANTHER:PTHR44574:SF1
EnsemblPlantsGene:SORBI_3004G237900	SUPFAM:SSF101941	UniParc:UPI0001A859BC	RefSeq:XP_002454285.1	SEG:seg	:

Description

hypothetical protein

Coordinates

chr4:-:58592872..58595851

Molecular Weight (calculated)

43606.6 Da

IEP (calculated)

8.797

GRAVY (calculated)

-0.554

Length

388 amino acids

Sequence
(BLAST)

001: MDEIRSDDIE KQDEVMLPGF RFHPTDEELV RFYLKRKIQQ KSLPIELIRQ LDIYKYDPWD LPKLASTGEK EWYFYCPRDR KYRNSTRPNR VTGAGFWKAT
101: GTDRPIYSSD GSKCIGLKKS LVFYKGRAAK GVKTDWMMHE FRLPSLTDPS LPQKKPLEKT IPPNDSWAIC RIFKKTNSTA QRALSHSWVS PPLSRTNENY
201: IRPSSQATQR SHHSSENTSS TMTDIISSIQ FTGSSYMPSI VSSCRNPASI IDSSSRPAAS LVLPSSGAEH HTMSVLSAIP LDLPAGMDIA SMVLNASPTT
301: LQNLDRIPTN IEFGQLHHPS NSSSSMANRC TVDLPDIGNS VTAAPRSINF PFNLQGALPD DWRMTLPWDS LPCTTEVSTN YQSTKCYT

Best Arabidopsis Sequence Match ( AT1G26870.1 )
(BLAST)

001: MGDRNNDGDQ KMEDVLLPGF RFHPTDEELV SFYLKRKVQH NPLSIELIRQ LDIYKYDPWD LPKFAMTGEK EWYFYCPRDR KYRNSSRPNR VTGAGFWKAT
101: GTDRPIYSSE GNKCIGLKKS LVFYKGRAAK GVKTDWMMHE FRLPSLSEPS PPSKRFFDSP VSPNDSWAIC RIFKKTNTTT LRALSHSFVS SLPPETSTDT
201: MSNQKQSNTY HFSSDKILKP SSHFQFHHEN MNTPKTSNST TPSVPTISPF SYLDFTSYDK PTNVFNPVSC LDQQYLTNLF LATQETQPQF PRLPSSNEIP
301: SFLLNTSSDS TFLGEFTSHI DLSAVLAQEQ CPPLVSLPQE YQETGFEGNG IMKNMRGSNE DHLGDHCDTL RFDDFTSTIN ENHRHHQDLK QNMTLLESYY
401: SSLSSINSDL PACFSSTT

Arabidopsis Description

FEZProtein FEZ [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVH0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.