Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 2
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d038221_P001 | Maize | plastid | 86.22 | 86.73 |
| TraesCS1A01G263700.1 | Wheat | nucleus | 71.26 | 82.94 |
| TraesCS1D01G263800.1 | Wheat | nucleus | 72.73 | 82.67 |
| HORVU1Hr1G063740.1 | Barley | nucleus | 70.97 | 82.59 |
| TraesCS1B01G274300.1 | Wheat | nucleus | 72.14 | 81.73 |
| KXG33829 | Sorghum | nucleus | 67.74 | 79.38 |
| GSMUA_Achr6P25380_001 | Banana | nucleus | 49.85 | 62.04 |
| KRH17977 | Soybean | nucleus | 48.39 | 61.57 |
| KRH16387 | Soybean | nucleus | 48.97 | 59.64 |
| VIT_18s0001g02300.t01 | Wine grape | nucleus | 52.2 | 59.53 |
| AT1G01720.1 | Thale cress | nucleus | 50.44 | 59.52 |
| CDY40732 | Canola | cytosol, nucleus, plastid | 44.87 | 59.3 |
| Bra033239.1-P | Field mustard | nucleus | 49.56 | 59.3 |
| CDX90054 | Canola | nucleus | 49.56 | 59.3 |
| PGSC0003DMT400023917 | Potato | nucleus | 50.44 | 59.11 |
| Bra038663.1-P | Field mustard | nucleus | 43.11 | 58.8 |
| CDY41537 | Canola | nucleus | 43.11 | 58.8 |
| CDY15158 | Canola | nucleus | 49.27 | 58.74 |
| KRH59618 | Soybean | nucleus | 51.03 | 58.39 |
| CDX84443 | Canola | nucleus | 43.11 | 58.33 |
| VIT_07s0031g02610.t01 | Wine grape | nucleus | 50.15 | 58.16 |
| Solyc11g017470.1.1 | Tomato | nucleus | 49.56 | 58.08 |
| KRH53247 | Soybean | nucleus | 50.73 | 57.86 |
| Solyc06g060230.2.1 | Tomato | nucleus | 50.15 | 57.77 |
| CDY44788 | Canola | cytosol, nucleus, plastid | 44.28 | 57.63 |
| CDX78352 | Canola | cytosol, nucleus, plastid | 44.28 | 57.63 |
| PGSC0003DMT400045294 | Potato | nucleus | 49.85 | 57.43 |
| KRH63977 | Soybean | nucleus | 48.97 | 57.39 |
| Bra029201.1-P | Field mustard | cytosol | 44.57 | 57.36 |
| KRH64668 | Soybean | nucleus | 50.44 | 57.33 |
| AT1G77450.1 | Thale cress | cytosol, nucleus, plastid | 42.52 | 57.31 |
| CDY31350 | Canola | nucleus | 44.28 | 56.98 |
| KRH53959 | Soybean | nucleus | 49.27 | 56.95 |
| Solyc04g009440.2.1 | Tomato | nucleus | 50.15 | 56.81 |
| Bra028645.1-P | Field mustard | nucleus | 46.04 | 56.47 |
| CDY21567 | Canola | nucleus | 46.04 | 56.47 |
| PGSC0003DMT400082472 | Potato | nucleus | 50.15 | 56.44 |
| CDY40894 | Canola | nucleus | 42.82 | 56.15 |
| Bra009370.1-P | Field mustard | nucleus | 45.75 | 56.12 |
| CDX69919 | Canola | nucleus | 45.75 | 56.12 |
| CDX81120 | Canola | nucleus | 39.59 | 56.02 |
| AT5G08790.1 | Thale cress | nucleus | 46.04 | 55.48 |
| Bra006015.1-P | Field mustard | cytosol, nucleus, plastid | 45.45 | 55.36 |
| Bra008309.1-P | Field mustard | cytosol, nucleus, plastid | 41.94 | 55.0 |
| CDY38346 | Canola | cytosol, nucleus, plastid | 41.94 | 55.0 |
| GSMUA_Achr6P17720_001 | Banana | nucleus | 46.63 | 54.83 |
| CDY39846 | Canola | mitochondrion | 44.28 | 51.36 |
| CDX84050 | Canola | nucleus | 27.57 | 48.7 |
| GSMUA_Achr3P18990_001 | Banana | plastid | 47.21 | 48.35 |
| AT5G63790.2 | Thale cress | cytosol | 44.87 | 47.52 |
| OQU83033 | Sorghum | nucleus | 49.85 | 44.27 |
| EER96087 | Sorghum | nucleus | 37.24 | 43.79 |
| EER93215 | Sorghum | nucleus | 38.12 | 40.75 |
| EES03797 | Sorghum | nucleus | 36.66 | 39.56 |
| EER99985 | Sorghum | nucleus | 32.26 | 31.07 |
| EER92326 | Sorghum | nucleus | 34.6 | 31.05 |
| KXG32136 | Sorghum | plastid | 32.84 | 29.47 |
| EER99924 | Sorghum | cytosol, nucleus, plastid | 32.84 | 28.87 |
| OQU90111 | Sorghum | nucleus | 35.19 | 28.71 |
| EES07907 | Sorghum | plastid | 31.96 | 27.11 |
| EER92917 | Sorghum | nucleus | 24.93 | 25.99 |
| EES17466 | Sorghum | nucleus | 23.17 | 25.99 |
| EES16571 | Sorghum | nucleus | 32.55 | 25.87 |
| EER95852 | Sorghum | nucleus | 25.22 | 25.07 |
| EES07261 | Sorghum | nucleus | 26.98 | 23.71 |
| EES13897 | Sorghum | nucleus | 26.39 | 23.44 |
| EER93360 | Sorghum | nucleus | 25.22 | 23.24 |
| EES13251 | Sorghum | mitochondrion, nucleus | 24.63 | 22.46 |
| OQU89481 | Sorghum | nucleus | 25.22 | 21.34 |
| EES19541 | Sorghum | nucleus | 25.51 | 20.76 |
| KXG20943 | Sorghum | nucleus, plastid | 23.46 | 20.73 |
| EES01882 | Sorghum | nucleus | 25.81 | 19.91 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | EntrezGene:8076977 | UniProt:A0A1B6P8Z9 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | InterPro:IPR003441 | InterPro:IPR036093 | EnsemblPlants:KXG22031 | ProteinID:KXG22031 | ProteinID:KXG22031.1 |
| InterPro:NAC-dom | InterPro:NAC_dom_sf | PFAM:PF02365 | PFscan:PS51005 | PANTHER:PTHR31719 | PANTHER:PTHR31719:SF43 |
| EnsemblPlantsGene:SORBI_3009G142200 | SUPFAM:SSF101941 | unigene:Sbi.14555 | UniParc:UPI00081AD6B0 | SEG:seg | : |
Description
hypothetical protein
Coordinates
chr9:+:49962287..49964254
Molecular Weight (calculated)
36085.8 Da
IEP (calculated)
8.627
GRAVY (calculated)
-0.435
Length
341 amino acids
Sequence
(BLAST)
(BLAST)
001: MSGGGGGGRA PAAQSQELQL PPGFRFHPTD EELVMHYLCR RCAGLPISVP IIAEIDLYKF DPWQLPILSL VCAGMALYGE KEWYFFSPRD RKYPNGSRPN
101: RAAGAGYWKA TGADKPVGTP KPLAIKKALV FYAGKAPKGD KTNWIMHEYR LADVDRTARN KNNSLRLDDW VLCRIYNKKG VPERPAGAGG AEASSQQGAQ
201: GSMGSPPEQK PSVPPHPTAG AGLYAPPPFS DLAAYCEVRP SDSMPRAHGA DSSCSGQGHA LAATSSSCGG GERPEVQSQP KIAEWERTFA GAGAGPGINP
301: AGSMLGLGGH HQLGPAAVGV GQLPAGDPLL QDILTYWGKP Y
101: RAAGAGYWKA TGADKPVGTP KPLAIKKALV FYAGKAPKGD KTNWIMHEYR LADVDRTARN KNNSLRLDDW VLCRIYNKKG VPERPAGAGG AEASSQQGAQ
201: GSMGSPPEQK PSVPPHPTAG AGLYAPPPFS DLAAYCEVRP SDSMPRAHGA DSSCSGQGHA LAATSSSCGG GERPEVQSQP KIAEWERTFA GAGAGPGINP
301: AGSMLGLGGH HQLGPAAVGV GQLPAGDPLL QDILTYWGKP Y
001: MSELLQLPPG FRFHPTDEEL VMHYLCRKCA SQSIAVPIIA EIDLYKYDPW ELPGLALYGE KEWYFFSPRD RKYPNGSRPN RSAGSGYWKA TGADKPIGLP
101: KPVGIKKALV FYAGKAPKGE KTNWIMHEYR LADVDRSVRK KKNSLRLDDW VLCRIYNKKG ATERRGPPPP VVYGDEIMEE KPKVTEMVMP PPPQQTSEFA
201: YFDTSDSVPK LHTTDSSCSE QVVSPEFTSE VQSEPKWKDW SAVSNDNNNT LDFGFNYIDA TVDNAFGGGG SSNQMFPLQD MFMYMQKPY
101: KPVGIKKALV FYAGKAPKGE KTNWIMHEYR LADVDRSVRK KKNSLRLDDW VLCRIYNKKG ATERRGPPPP VVYGDEIMEE KPKVTEMVMP PPPQQTSEFA
201: YFDTSDSVPK LHTTDSSCSE QVVSPEFTSE VQSEPKWKDW SAVSNDNNNT LDFGFNYIDA TVDNAFGGGG SSNQMFPLQD MFMYMQKPY
Arabidopsis Description
NAC002ATAF1 [Source:UniProtKB/TrEMBL;Acc:A0A178W8W1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.