Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY15158 | Canola | nucleus | 88.93 | 89.86 |
| CDX90054 | Canola | nucleus | 88.58 | 89.82 |
| Bra033239.1-P | Field mustard | nucleus | 88.58 | 89.82 |
| AT1G77450.1 | Thale cress | cytosol, nucleus, plastid | 57.79 | 66.01 |
| GSMUA_Achr10P... | Banana | nucleus | 58.13 | 65.88 |
| GSMUA_Achr6P18720_001 | Banana | nucleus | 59.52 | 62.77 |
| KXG33829 | Sorghum | nucleus | 62.63 | 62.2 |
| Zm00001d042609_P001 | Maize | cytosol, mitochondrion, nucleus | 62.28 | 61.02 |
| AT5G08790.1 | Thale cress | nucleus | 59.52 | 60.78 |
| TraesCS3A01G406000.1 | Wheat | nucleus | 62.63 | 60.54 |
| TraesCS3D01G401200.1 | Wheat | nucleus | 62.63 | 60.54 |
| TraesCS3B01G439600.1 | Wheat | nucleus | 62.28 | 60.4 |
| Os01t0884300-01 | Rice | nucleus | 63.32 | 60.4 |
| GSMUA_Achr7P23250_001 | Banana | nucleus | 55.71 | 60.07 |
| HORVU1Hr1G063740.1 | Barley | nucleus | 60.55 | 59.73 |
| TraesCS1A01G263700.1 | Wheat | nucleus | 59.86 | 59.04 |
| GSMUA_Achr6P25380_001 | Banana | nucleus | 55.36 | 58.39 |
| TraesCS1D01G263800.1 | Wheat | nucleus | 60.21 | 58.0 |
| GSMUA_Achr6P17720_001 | Banana | nucleus | 57.44 | 57.24 |
| TraesCS1B01G274300.1 | Wheat | nucleus | 59.52 | 57.14 |
| Zm00001d038221_P001 | Maize | plastid | 59.17 | 50.44 |
| KXG22031 | Sorghum | nucleus | 59.52 | 50.44 |
| AT5G63790.2 | Thale cress | cytosol | 55.71 | 50.0 |
| GSMUA_Achr3P18990_001 | Banana | plastid | 57.44 | 49.85 |
| Os11t0184900-02 | Rice | nucleus | 56.4 | 49.54 |
| HORVU4Hr1G017430.7 | Barley | nucleus | 55.36 | 48.19 |
| TraesCS4B01G098200.1 | Wheat | nucleus | 55.02 | 47.6 |
| TraesCS4D01G094400.1 | Wheat | nucleus | 55.02 | 47.46 |
| TraesCS4A01G219700.1 | Wheat | nucleus | 55.02 | 47.46 |
| Zm00001d000112_P001 | Maize | nucleus | 56.4 | 45.4 |
| OQU83033 | Sorghum | nucleus | 55.71 | 41.93 |
| AT1G69490.1 | Thale cress | nucleus | 38.06 | 41.04 |
| AT1G52880.1 | Thale cress | nucleus | 43.94 | 39.69 |
| AT1G52890.1 | Thale cress | nucleus | 42.56 | 38.8 |
| AT1G61110.1 | Thale cress | nucleus | 42.91 | 38.39 |
| AT4G27410.3 | Thale cress | nucleus | 41.52 | 38.22 |
| AT3G15500.1 | Thale cress | nucleus | 41.87 | 38.17 |
| AT3G15510.1 | Thale cress | nucleus | 43.94 | 34.89 |
| AT3G04070.1 | Thale cress | nucleus | 40.83 | 32.87 |
| AT2G43000.1 | Thale cress | nucleus | 30.45 | 32.0 |
| AT2G17040.1 | Thale cress | nucleus | 26.64 | 27.9 |
| AT3G12910.1 | Thale cress | nucleus | 29.07 | 27.72 |
| AT5G39820.1 | Thale cress | nucleus | 29.41 | 25.22 |
| AT2G02450.2 | Thale cress | nucleus | 31.83 | 22.22 |
| AT1G26870.1 | Thale cress | nucleus | 31.83 | 22.01 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | EntrezGene:839265 | UniProt:A0A178W8W1 | ProteinID:AAF78403.1 | ProteinID:AEE27326.1 |
| EMBL:AF370617 | ArrayExpress:AT1G01720 | EnsemblPlantsGene:AT1G01720 | RefSeq:AT1G01720 | TAIR:AT1G01720 | RefSeq:AT1G01720-TAIR-G |
| EnsemblPlants:AT1G01720.1 | TAIR:AT1G01720.1 | Symbol:ATAF1 | EMBL:BT024513 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0006950 | GO:GO:0007154 |
| GO:GO:0007165 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009611 | GO:GO:0009719 |
| GO:GO:0009788 | GO:GO:0009987 | InterPro:IPR003441 | InterPro:IPR036093 | InterPro:NAC-dom | InterPro:NAC_dom_sf |
| RefSeq:NP_171677.1 | ProteinID:OAP14514.1 | PFAM:PF02365 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 |
| PO:PO:0000293 | PO:PO:0001017 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 |
| PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 |
| PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 |
| PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 |
| PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 | PFscan:PS51005 |
| PANTHER:PTHR31719 | PANTHER:PTHR31719:SF16 | UniProt:Q2HIR8 | UniProt:Q39013 | SUPFAM:SSF101941 | UniParc:UPI00000A9686 |
| EMBL:X74755 | : | : | : | : | : |
Description
NAC002ATAF1 [Source:UniProtKB/TrEMBL;Acc:A0A178W8W1]
Coordinates
chr1:+:267993..269819
Molecular Weight (calculated)
32924.0 Da
IEP (calculated)
6.527
GRAVY (calculated)
-0.661
Length
289 amino acids
Sequence
(BLAST)
(BLAST)
001: MSELLQLPPG FRFHPTDEEL VMHYLCRKCA SQSIAVPIIA EIDLYKYDPW ELPGLALYGE KEWYFFSPRD RKYPNGSRPN RSAGSGYWKA TGADKPIGLP
101: KPVGIKKALV FYAGKAPKGE KTNWIMHEYR LADVDRSVRK KKNSLRLDDW VLCRIYNKKG ATERRGPPPP VVYGDEIMEE KPKVTEMVMP PPPQQTSEFA
201: YFDTSDSVPK LHTTDSSCSE QVVSPEFTSE VQSEPKWKDW SAVSNDNNNT LDFGFNYIDA TVDNAFGGGG SSNQMFPLQD MFMYMQKPY
101: KPVGIKKALV FYAGKAPKGE KTNWIMHEYR LADVDRSVRK KKNSLRLDDW VLCRIYNKKG ATERRGPPPP VVYGDEIMEE KPKVTEMVMP PPPQQTSEFA
201: YFDTSDSVPK LHTTDSSCSE QVVSPEFTSE VQSEPKWKDW SAVSNDNNNT LDFGFNYIDA TVDNAFGGGG SSNQMFPLQD MFMYMQKPY
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.