Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX82432 | Canola | nucleus | 66.56 | 85.43 |
| CDY21844 | Canola | nucleus | 84.86 | 84.86 |
| CDY20109 | Canola | nucleus | 84.86 | 84.86 |
| Bra021113.1-P | Field mustard | nucleus | 84.54 | 84.54 |
| CDX98560 | Canola | nucleus | 85.17 | 84.38 |
| CDX97674 | Canola | nucleus | 85.17 | 84.11 |
| Bra001596.1-P | Field mustard | nucleus | 76.34 | 82.03 |
| CDX75833 | Canola | nucleus | 76.66 | 81.82 |
| Bra027238.1-P | Field mustard | nucleus | 85.49 | 81.38 |
| AT1G52890.1 | Thale cress | nucleus | 74.13 | 74.13 |
| AT4G27410.3 | Thale cress | nucleus | 58.04 | 58.6 |
| VIT_19s0014g03290.t01 | Wine grape | nucleus | 60.88 | 57.96 |
| KRH22137 | Soybean | nucleus | 60.25 | 55.69 |
| KRH27201 | Soybean | nucleus | 59.94 | 55.07 |
| Solyc12g013620.1.1 | Tomato | nucleus | 58.68 | 53.3 |
| PGSC0003DMT400039670 | Potato | nucleus | 58.36 | 52.71 |
| AT1G77450.1 | Thale cress | cytosol, nucleus, plastid | 35.02 | 43.87 |
| AT1G01720.1 | Thale cress | nucleus | 38.17 | 41.87 |
| AT5G08790.1 | Thale cress | nucleus | 36.59 | 40.99 |
| AT1G69490.1 | Thale cress | nucleus | 34.38 | 40.67 |
| AT1G61110.1 | Thale cress | nucleus | 39.12 | 38.39 |
| AT1G52880.1 | Thale cress | nucleus | 36.91 | 36.56 |
| AT5G63790.2 | Thale cress | cytosol | 35.02 | 34.47 |
| AT3G04070.1 | Thale cress | nucleus | 38.17 | 33.7 |
| AT3G15510.1 | Thale cress | nucleus | 38.49 | 33.52 |
| AT2G43000.1 | Thale cress | nucleus | 28.71 | 33.09 |
| AT5G39820.1 | Thale cress | nucleus | 30.28 | 28.49 |
| AT3G12910.1 | Thale cress | nucleus | 27.13 | 28.38 |
| AT2G17040.1 | Thale cress | nucleus | 24.29 | 27.9 |
| AT1G26870.1 | Thale cress | nucleus | 30.91 | 23.45 |
| AT2G02450.2 | Thale cress | nucleus | 29.34 | 22.46 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | EntrezGene:820789 | UniProt:A0A178VLD3 | ProteinID:AAF35416.1 | EMBL:AB049070 |
| ProteinID:AEE75683.1 | ArrayExpress:AT3G15500 | EnsemblPlantsGene:AT3G15500 | RefSeq:AT3G15500 | TAIR:AT3G15500 | RefSeq:AT3G15500-TAIR-G |
| EnsemblPlants:AT3G15500.1 | TAIR:AT3G15500.1 | Symbol:ATNAC3 | EMBL:AY084508 | ProteinID:BAB02379.1 | EMBL:BT025659 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0006950 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009414 | GO:GO:0009628 | GO:GO:0009719 | GO:GO:0009867 | GO:GO:0009987 |
| InterPro:IPR003441 | InterPro:IPR036093 | InterPro:NAC-dom | InterPro:NAC_dom_sf | RefSeq:NP_188169.1 | ProteinID:OAP06261.1 |
| PFAM:PF02365 | PO:PO:0000005 | PO:PO:0000293 | PO:PO:0001185 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0009005 | PO:PO:0009009 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0025022 | PO:PO:0025281 | PFscan:PS51005 |
| PANTHER:PTHR44908 | UniProt:Q9LDY8 | SUPFAM:SSF101941 | UniParc:UPI00000A0B51 | SEG:seg | : |
Description
NAC055NAC3 [Source:UniProtKB/TrEMBL;Acc:A0A178VLD3]
Coordinates
chr3:+:5234457..5236196
Molecular Weight (calculated)
35407.4 Da
IEP (calculated)
8.870
GRAVY (calculated)
-0.633
Length
317 amino acids
Sequence
(BLAST)
(BLAST)
001: MGLQELDPLA QLSLPPGFRF YPTDEELMVE YLCRKAAGHD FSLQLIAEID LYKFDPWVLP SKALFGEKEW YFFSPRDRKY PNGSRPNRVA GSGYWKATGT
101: DKVISTEGRR VGIKKALVFY IGKAPKGTKT NWIMHEYRLI EPSRRNGSTK LDDWVLCRIY KKQTSAQKQA YNNLMTSGRE YSNNGSSTSS SSHQYDDVLE
201: SLHEIDNRSL GFAAGSSNAL PHSHRPVLTN HKTGFQGLAR EPSFDWANLI GQNSVPELGL SHNVPSIRYG DGGTQQQTEG IPRFNNNSDV SANQGFSVDP
301: VNGFGYSGQQ SSGFGFI
101: DKVISTEGRR VGIKKALVFY IGKAPKGTKT NWIMHEYRLI EPSRRNGSTK LDDWVLCRIY KKQTSAQKQA YNNLMTSGRE YSNNGSSTSS SSHQYDDVLE
201: SLHEIDNRSL GFAAGSSNAL PHSHRPVLTN HKTGFQGLAR EPSFDWANLI GQNSVPELGL SHNVPSIRYG DGGTQQQTEG IPRFNNNSDV SANQGFSVDP
301: VNGFGYSGQQ SSGFGFI
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.