Factsheet for Bra027238.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX97674	Canola	nucleus	96.4	100.0
CDX98560	Canola	nucleus	94.89	98.75
Bra021113.1-P	Field mustard	nucleus	81.68	85.8
AT3G15500.1	Thale cress	nucleus	81.38	85.49
Bra001596.1-P	Field mustard	nucleus	75.08	84.75
Bra018998.1-P	Field mustard	nucleus	67.27	58.49
Bra026353.1-P	Field mustard	nucleus	52.25	58.0
Bra019052.1-P	Field mustard	nucleus	52.25	58.0
VIT_19s0014g03290.t01	Wine grape	nucleus	56.46	56.46
KRH22137	Soybean	nucleus	57.66	55.98
KRH27201	Soybean	nucleus	56.76	54.78
Solyc12g013620.1.1	Tomato	nucleus	53.45	51.0
PGSC0003DMT400039670	Potato	nucleus	53.15	50.43
Bra038663.1-P	Field mustard	nucleus	33.33	44.4
Bra008309.1-P	Field mustard	cytosol, nucleus, plastid	33.33	42.69
Bra029201.1-P	Field mustard	cytosol	33.63	42.26
Bra033239.1-P	Field mustard	nucleus	36.04	42.11
Bra028645.1-P	Field mustard	nucleus	34.83	41.73
Bra009370.1-P	Field mustard	nucleus	33.93	40.65
Bra006015.1-P	Field mustard	cytosol, nucleus, plastid	33.93	40.36
Bra004385.1-P	Field mustard	cytosol	31.83	39.26
Bra027101.1-P	Field mustard	nucleus	36.04	37.62
Bra031949.1-P	Field mustard	nucleus	35.74	36.62
Bra003998.1-P	Field mustard	nucleus	25.83	35.98
Bra018997.1-P	Field mustard	nucleus	35.14	35.78
Bra027237.1-P	Field mustard	nucleus	35.74	33.9
Bra021114.1-P	Field mustard	nucleus	36.04	33.52
Bra001597.1-P	Field mustard	nucleus	35.14	33.43
Bra040152.1-P	Field mustard	nucleus	35.74	33.33
Bra000282.1-P	Field mustard	nucleus	27.03	33.09
Bra037743.1-P	Field mustard	nucleus	27.03	32.49
Bra004736.1-P	Field mustard	nucleus	26.43	31.43
Bra037283.1-P	Field mustard	nucleus	24.02	28.67
Bra028441.1-P	Field mustard	nucleus	27.93	27.76
Bra039353.1-P	Field mustard	nucleus	25.23	27.36
Bra013034.1-P	Field mustard	nucleus	22.82	27.05
Bra034719.1-P	Field mustard	nucleus	26.13	26.61
Bra002018.1-P	Field mustard	cytosol	23.42	24.45
Bra016294.1-P	Field mustard	nucleus	30.03	24.27
Bra017416.1-P	Field mustard	nucleus	27.93	23.37
Bra026595.1-P	Field mustard	nucleus	27.33	23.1
Bra024677.1-P	Field mustard	nucleus	28.83	23.08
Bra004403.1-P	Field mustard	nucleus	27.63	22.72
Bra024818.1-P	Field mustard	nucleus	27.33	22.36

Protein Annotations

MapMan:15.5.17	Gene3D:3.30.310.150	EnsemblPlantsGene:Bra027238	EnsemblPlants:Bra027238.1	EnsemblPlants:Bra027238.1-P	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	InterPro:IPR003441	InterPro:IPR036093	UniProt:M4EEM6	InterPro:NAC-dom
InterPro:NAC_dom_sf	PFAM:PF02365	PFscan:PS51005	PANTHER:PTHR44908	SUPFAM:SSF101941	UniParc:UPI0002547A21
SEG:seg	:	:	:	:	:

Description

AT3G15500 (E=1e-149) ATNAC3, ANAC055 | ANAC055 (ARABIDOPSIS NAC DOMAIN CONTAINING PROTEIN 55); transcription factor

Coordinates

chrA05:-:19886087..19887288

Molecular Weight (calculated)

37387.5 Da

IEP (calculated)

7.733

GRAVY (calculated)

-0.720

Length

333 amino acids

Sequence
(BLAST)

001: MGIQELDPLA QLSLPPGFRF YPTDEELMVD YLCRKAAGHD FSLQLIAEID LYKFDAWVLP SKALFGEKEW YFFSPRDRKY PNGSRPNRVA GSGYWKATGT
101: DKVISTEGRR VGIKKALVFY VGKAPKGTKT NWIMHEYRLI EPSRRNGSTK LDDWVLCRIY KKQSSAQKQA YGNLMTSASE YSNNGSSTST SSHQYDDVLE
201: SLHEIDNRSL GYAAGSSHTI PHYNRRPGLT EQKTGFLDLA REQSYNWTNF GGHNSVQELG RNLNVPSLRY GDGGGYLHGL KTNEEDDKTQ QQQAEGIPQF
301: NNSGVLAHDQ SFSVDPVNGF GYSGQQPSGF GFM

Best Arabidopsis Sequence Match ( AT3G15500.1 )
(BLAST)

001: MGLQELDPLA QLSLPPGFRF YPTDEELMVE YLCRKAAGHD FSLQLIAEID LYKFDPWVLP SKALFGEKEW YFFSPRDRKY PNGSRPNRVA GSGYWKATGT
101: DKVISTEGRR VGIKKALVFY IGKAPKGTKT NWIMHEYRLI EPSRRNGSTK LDDWVLCRIY KKQTSAQKQA YNNLMTSGRE YSNNGSSTSS SSHQYDDVLE
201: SLHEIDNRSL GFAAGSSNAL PHSHRPVLTN HKTGFQGLAR EPSFDWANLI GQNSVPELGL SHNVPSIRYG DGGTQQQTEG IPRFNNNSDV SANQGFSVDP
301: VNGFGYSGQQ SSGFGFI

Arabidopsis Description

NAC055NAC3 [Source:UniProtKB/TrEMBL;Acc:A0A178VLD3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.