Factsheet for Bra018998.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra013546.1-P
Bra020905.1-P
Bra026165.1-P
Bra027467.1-P
Bra033652.1-P
Bra038764.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G52890.1	Bra026165.1-P	AT1G15100.1	12646039
AT1G52890.1	Bra013546.1-P	AT4G21670.1	18541146
AT1G52890.1	Bra020905.1-P	AT4G21670.1	18541146
AT1G52890.1	Bra038764.1-P	AT4G21670.1	18541146
AT1G52890.1	Bra027467.1-P	AT5G42940.1	12646039
AT1G52890.1	Bra033652.1-P	AT5G42940.1	12646039

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY26031	Canola	cytosol	39.43	100.0
CDY26032	Canola	cytosol	40.73	96.89
AT1G52890.1	Thale cress	nucleus	69.19	83.6
Bra021113.1-P	Field mustard	nucleus	57.96	70.03
Bra001596.1-P	Field mustard	nucleus	52.22	67.8
Bra027238.1-P	Field mustard	nucleus	58.49	67.27
Bra019052.1-P	Field mustard	nucleus	47.52	60.67
Bra026353.1-P	Field mustard	nucleus	46.74	59.67
VIT_19s0014g03290.t01	Wine grape	nucleus	49.87	57.36
KRH22137	Soybean	nucleus	48.04	53.64
KRH27201	Soybean	nucleus	47.52	52.75
Solyc12g013620.1.1	Tomato	nucleus	46.48	51.0
PGSC0003DMT400039670	Potato	nucleus	46.48	50.71
Bra038663.1-P	Field mustard	nucleus	29.77	45.6
Bra033239.1-P	Field mustard	nucleus	31.85	42.81
Bra028645.1-P	Field mustard	nucleus	31.07	42.81
Bra029201.1-P	Field mustard	cytosol	29.5	42.64
Bra009370.1-P	Field mustard	nucleus	30.55	42.09
Bra008309.1-P	Field mustard	cytosol, nucleus, plastid	28.46	41.92
Bra006015.1-P	Field mustard	cytosol, nucleus, plastid	29.77	40.71
Bra004385.1-P	Field mustard	cytosol	28.2	40.0
Bra027101.1-P	Field mustard	nucleus	32.11	38.56
Bra003998.1-P	Field mustard	nucleus	23.24	37.24
Bra031949.1-P	Field mustard	nucleus	31.33	36.92
Bra018997.1-P	Field mustard	nucleus	31.07	36.39
Bra027237.1-P	Field mustard	nucleus	31.59	34.47
Bra021114.1-P	Field mustard	nucleus	31.85	34.08
Bra001597.1-P	Field mustard	nucleus	30.81	33.71
Bra040152.1-P	Field mustard	nucleus	31.33	33.61
Bra000282.1-P	Field mustard	nucleus	22.98	32.35
Bra037743.1-P	Field mustard	nucleus	23.24	32.13
Bra004736.1-P	Field mustard	nucleus	22.72	31.07
Bra028441.1-P	Field mustard	nucleus	24.02	27.46
Bra037283.1-P	Field mustard	nucleus	19.84	27.24
Bra034719.1-P	Field mustard	nucleus	22.98	26.91
Bra039353.1-P	Field mustard	nucleus	21.41	26.71
Bra013034.1-P	Field mustard	nucleus	18.8	25.62
Bra016294.1-P	Field mustard	nucleus	25.59	23.79
Bra002018.1-P	Field mustard	cytosol	19.32	23.2
Bra017416.1-P	Field mustard	nucleus	24.02	23.12
Bra026595.1-P	Field mustard	nucleus	23.76	23.1
Bra024677.1-P	Field mustard	nucleus	25.07	23.08
Bra024818.1-P	Field mustard	nucleus	24.02	22.6
Bra004403.1-P	Field mustard	nucleus	23.5	22.22

Protein Annotations

MapMan:15.5.17	Gene3D:3.30.310.150	EnsemblPlantsGene:Bra018998	EnsemblPlants:Bra018998.1	EnsemblPlants:Bra018998.1-P	ncoils:Coil
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355
GO:GO:0006950	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009414	GO:GO:0009628
GO:GO:0009987	InterPro:IPR003441	InterPro:IPR036093	UniProt:M4DR55	InterPro:NAC-dom	InterPro:NAC_dom_sf
PFAM:PF02365	PFscan:PS51005	PANTHER:PTHR44908	SUPFAM:SSF101941	UniParc:UPI000253E886	SEG:seg

Description

AT1G52890 (E=3e-148) ANAC019 | ANAC019 (Arabidopsis NAC domain containing protein 19); transcription factor

Coordinates

chrA06:+:823427..825395

Molecular Weight (calculated)

43529.9 Da

IEP (calculated)

9.087

GRAVY (calculated)

-0.774

Length

383 amino acids

Sequence
(BLAST)

001: MGIQETDPLA QLSLPPGFRF YPTDEELMVQ YLCRKAAGYD FSLQLIAEID LYKFDPWVLP NKALFGEKEW YFFSPRDRKY PNGSRPNRVA GSGYWKATGT
101: DKIISTEGKR VGIKKALVFY IGKAPKGTKT NWIMHEYRLL EPSRANGSSK LDDWVLCRIY KKQSSAQKQA YEHVVTSTRE LSNNGTSSTT SSSSHFEDVL
201: DSLHHETDNR NFQYANSNRL SSLRPDLTVG EKTGFNGFAD TNSFDWGSFV GNVEHNSGPE LGLSHVVPSL EFNSGYLKME EEFNNPDDFG FAQNGYGIDS
301: VGFGYSGQVG LTNLKEAKNT LFPPPLDSIN EKNNAKTKNF SAHRRDRQHI TVKKTESETR LRRIKKRMKN EGEETRLWCR HAP

Best Arabidopsis Sequence Match ( AT1G52890.1 )
(BLAST)

001: MGIQETDPLT QLSLPPGFRF YPTDEELMVQ YLCRKAAGYD FSLQLIAEID LYKFDPWVLP NKALFGEKEW YFFSPRDRKY PNGSRPNRVA GSGYWKATGT
101: DKIISTEGQR VGIKKALVFY IGKAPKGTKT NWIMHEYRLI EPSRRNGSTK LDDWVLCRIY KKQSSAQKQV YDNGIANARE FSNNGTSSTT SSSSHFEDVL
201: DSFHQEIDNR NFQFSNPNRI SSLRPDLTEQ KTGFHGLADT SNFDWASFAG NVEHNNSVPE LGMSHVVPNL EYNCGYLKTE EEVESSHGFN NSGELAQKGY
301: GVDSFGYSGQ VGGFGFM

Arabidopsis Description

NAC019NAC domain-containing protein 19 [Source:UniProtKB/Swiss-Prot;Acc:Q9C932]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.