Factsheet for Bra018997.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY53806	Canola	nucleus	97.25	100.0
CDY69545	Canola	nucleus	92.35	96.79
AT1G52880.1	Thale cress	nucleus	62.08	63.44
Bra027237.1-P	Field mustard	nucleus	64.83	60.4
Bra001597.1-P	Field mustard	nucleus	62.39	58.29
Bra021114.1-P	Field mustard	nucleus	63.61	58.1
VIT_19s0014g03300.t01	Wine grape	nucleus	59.33	54.96
Bra027101.1-P	Field mustard	nucleus	48.62	49.84
KRH22138	Soybean	nucleus	56.57	49.33
PGSC0003DMT400064428	Potato	nucleus	51.99	48.43
KRH27199	Soybean	nucleus	55.35	48.27
Solyc10g006880.2.1	Tomato	nucleus	51.99	47.89
GSMUA_Achr9P19520_001	Banana	nucleus	45.26	45.4
Bra038663.1-P	Field mustard	nucleus	34.25	44.8
Bra033239.1-P	Field mustard	nucleus	38.53	44.21
Bra004385.1-P	Field mustard	cytosol	36.39	44.07
Bra008309.1-P	Field mustard	cytosol, nucleus, plastid	34.56	43.46
Bra028645.1-P	Field mustard	nucleus	36.39	42.81
Bra029201.1-P	Field mustard	cytosol	34.56	42.64
GSMUA_Achr1P08860_001	Banana	nucleus	46.48	42.34
Bra009370.1-P	Field mustard	nucleus	35.78	42.09
Bra006015.1-P	Field mustard	cytosol, nucleus, plastid	35.47	41.43
Bra003998.1-P	Field mustard	nucleus	29.97	41.0
Bra026353.1-P	Field mustard	nucleus	37.0	40.33
Bra019052.1-P	Field mustard	nucleus	35.78	39.0
Bra001596.1-P	Field mustard	nucleus	35.17	38.98
TraesCS2D01G214100.1	Wheat	nucleus	47.4	38.85
OQU90111	Sorghum	nucleus	49.54	38.76
HORVU2Hr1G039640.2	Barley	nucleus	47.4	38.27
TraesCS2B01G228900.1	Wheat	nucleus	47.4	38.18
TraesCS2A01G201800.2	Wheat	nucleus	47.4	38.08
Zm00001d021818_P002	Maize	nucleus	48.32	37.71
Bra031949.1-P	Field mustard	nucleus	37.31	37.54
TraesCS6D01G096300.1	Wheat	nucleus	47.09	37.47
Os07t0566500-01	Rice	nucleus	48.01	36.94
TraesCS6A01G108300.2	Wheat	nucleus	46.79	36.78
Bra040152.1-P	Field mustard	nucleus	39.76	36.41
Bra021113.1-P	Field mustard	nucleus	35.17	36.28
HORVU6Hr1G019380.2	Barley	plastid	45.26	36.1
Bra027238.1-P	Field mustard	nucleus	35.78	35.14
Bra000282.1-P	Field mustard	nucleus	26.91	32.35
Bra004736.1-P	Field mustard	nucleus	27.52	32.14
Bra037743.1-P	Field mustard	nucleus	26.61	31.41
Bra018998.1-P	Field mustard	nucleus	36.39	31.07
Bra039353.1-P	Field mustard	nucleus	26.91	28.66
Bra028441.1-P	Field mustard	nucleus	29.36	28.66
Bra037283.1-P	Field mustard	nucleus	24.16	28.32
Bra013034.1-P	Field mustard	nucleus	23.55	27.4
Bra034719.1-P	Field mustard	nucleus	26.61	26.61
Bra002018.1-P	Field mustard	cytosol	23.55	24.14
Bra016294.1-P	Field mustard	nucleus	29.66	23.54
Bra024677.1-P	Field mustard	nucleus	28.75	22.6
Bra026595.1-P	Field mustard	nucleus	27.22	22.59
Bra017416.1-P	Field mustard	nucleus	26.91	22.11
Bra004403.1-P	Field mustard	nucleus	27.22	21.98
Bra024818.1-P	Field mustard	nucleus	26.91	21.62

Protein Annotations

MapMan:15.5.17	Gene3D:3.30.310.150	EnsemblPlantsGene:Bra018997	EnsemblPlants:Bra018997.1	EnsemblPlants:Bra018997.1-P	GO:GO:0000003
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355
GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009653	GO:GO:0009790
GO:GO:0009791	GO:GO:0009908	GO:GO:0009987	GO:GO:0043565	GO:GO:0044212	GO:GO:0045995
GO:GO:0048317	GO:GO:0080060	InterPro:IPR003441	InterPro:IPR036093	UniProt:M4DR54	InterPro:NAC-dom
InterPro:NAC_dom_sf	PFAM:PF02365	PFscan:PS51005	PANTHER:PTHR45430	SUPFAM:SSF101941	UniParc:UPI000253E887
SEG:seg	:	:	:	:	:

Description

AT1G52880 (E=2e-098) NAM, ANAC018, ATNAM, NARS2 | NAM (NO APICAL MERISTEM); transcription factor

Coordinates

chrA06:+:832224..833394

Molecular Weight (calculated)

36687.9 Da

IEP (calculated)

7.582

GRAVY (calculated)

-0.806

Length

327 amino acids

Sequence
(BLAST)

001: MQVMETTDSS GGPPPQPNLP PGFRFHPTDE ELVIHYLKRK ADSSPLPVAI IADVDLYKHD PWELPEKALF GEQEWYFFSP RDRKYPNGAR PNRAATSGYW
101: KATGTDKPVI STGDGNKKVG VKKALVFYTG KPPKGIKSDW IMHEYRLADN KPSLRCDFGH KKNSLRLDDW VLCRIYKKNN STSSRHHHHH HLDNDKDHHH
201: HFHHDMMRDD DLYRLPLSVP GQNVSRMNIF PAVFSDNNDP AAIYDGGGGG AGYSMNHDFA SSSGLNQKPN IPMPFWDQDP AKRFNGGVGD CSDMVSSVAA
301: PSSMQQQGGV LGDGLDRTSY HLTGLNW

Best Arabidopsis Sequence Match ( AT1G52880.1 )
(BLAST)

001: MESTDSSGGP PPPQPNLPPG FRFHPTDEEL VIHYLKRKAD SVPLPVAIIA DVDLYKFDPW ELPAKASFGE QEWYFFSPRD RKYPNGARPN RAATSGYWKA
101: TGTDKPVIST GGGGSKKVGV KKALVFYSGK PPKGVKSDWI MHEYRLTDNK PTHICDFGNK KNSLRLDDWV LCRIYKKNNS TASRHHHHLH HIHLDNDHHR
201: HDMMIDDDRF RHVPPGLHFP AIFSDNNDPT AIYDGGGGGY GGGSYSMNHC FASGSKQEQL FPPVMMMTSL NQDSGIGSSS SPSKRFNGGG VGDCSTSMAA
301: TPLMQNQGGI YQLPGLNWYS

Arabidopsis Description

NAC018NARS2 [Source:UniProtKB/TrEMBL;Acc:A0A178W6K4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.