Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr1P08860_001 | Banana | nucleus | 79.75 | 72.42 |
| CDX82430 | Canola | nucleus | 43.25 | 70.85 |
| CDY22671 | Canola | nucleus | 42.94 | 70.35 |
| GSMUA_Achr7P21770_001 | Banana | nucleus | 38.65 | 63.0 |
| CDY56427 | Canola | nucleus | 50.0 | 49.85 |
| VIT_19s0014g03300.t01 | Wine grape | nucleus | 53.37 | 49.29 |
| CDX97675 | Canola | nucleus | 50.0 | 47.52 |
| CDY69545 | Canola | nucleus | 45.4 | 47.44 |
| AT1G52880.1 | Thale cress | nucleus | 46.01 | 46.88 |
| Bra027237.1-P | Field mustard | nucleus | 50.0 | 46.44 |
| CDY53806 | Canola | nucleus | 45.09 | 46.23 |
| CDY20131 | Canola | nucleus | 49.39 | 46.0 |
| KRH22138 | Soybean | nucleus | 52.45 | 45.6 |
| GSMUA_Achr6P32330_001 | Banana | cytosol | 37.73 | 45.56 |
| GSMUA_Achr10P... | Banana | nucleus | 35.58 | 45.49 |
| Bra001597.1-P | Field mustard | nucleus | 48.77 | 45.43 |
| CDX98562 | Canola | nucleus | 50.0 | 45.4 |
| KRH27199 | Soybean | nucleus | 52.15 | 45.33 |
| Bra018997.1-P | Field mustard | nucleus | 45.4 | 45.26 |
| Bra021114.1-P | Field mustard | nucleus | 49.39 | 44.97 |
| PGSC0003DMT400064428 | Potato | nucleus | 48.16 | 44.73 |
| GSMUA_Achr4P02390_001 | Banana | nucleus | 36.2 | 44.7 |
| AT3G15510.1 | Thale cress | nucleus | 49.39 | 44.23 |
| Solyc10g006880.2.1 | Tomato | nucleus | 47.55 | 43.66 |
| GSMUA_Achr7P23250_001 | Banana | nucleus | 35.89 | 43.66 |
| GSMUA_Achr10P... | Banana | nucleus | 38.96 | 42.05 |
| GSMUA_Achr6P18720_001 | Banana | nucleus | 35.28 | 41.97 |
| GSMUA_Achr6P25380_001 | Banana | nucleus | 34.97 | 41.61 |
| GSMUA_Achr6P17720_001 | Banana | nucleus | 36.2 | 40.69 |
| GSMUA_Achr6P32320_001 | Banana | nucleus | 42.33 | 40.0 |
| GSMUA_Achr5P07590_001 | Banana | nucleus | 35.58 | 40.0 |
| GSMUA_Achr7P21780_001 | Banana | nucleus | 36.5 | 39.93 |
| GSMUA_Achr4P02380_001 | Banana | nucleus | 40.8 | 39.82 |
| GSMUA_Achr4P10310_001 | Banana | nucleus | 35.28 | 39.25 |
| Zm00001d021818_P002 | Maize | nucleus | 50.0 | 38.9 |
| GSMUA_AchrUn_... | Banana | nucleus | 38.96 | 38.84 |
| OQU90111 | Sorghum | nucleus | 49.69 | 38.76 |
| TraesCS2D01G214100.1 | Wheat | nucleus | 47.24 | 38.6 |
| TraesCS2B01G228900.1 | Wheat | nucleus | 47.85 | 38.42 |
| HORVU2Hr1G039640.2 | Barley | nucleus | 47.55 | 38.27 |
| TraesCS2A01G201800.2 | Wheat | nucleus | 47.55 | 38.08 |
| GSMUA_Achr10P... | Banana | cytosol | 34.97 | 37.5 |
| TraesCS6A01G108300.2 | Wheat | nucleus | 46.63 | 36.54 |
| TraesCS6D01G096300.1 | Wheat | nucleus | 46.01 | 36.5 |
| HORVU6Hr1G019380.2 | Barley | plastid | 45.71 | 36.34 |
| GSMUA_Achr3P18990_001 | Banana | plastid | 37.12 | 36.34 |
| Os07t0566500-01 | Rice | nucleus | 47.24 | 36.24 |
| GSMUA_Achr3P18010_001 | Banana | nucleus | 39.57 | 35.05 |
| GSMUA_Achr7P00860_001 | Banana | nucleus | 25.15 | 31.3 |
| GSMUA_Achr4P23030_001 | Banana | nucleus | 23.93 | 31.2 |
| GSMUA_Achr5P19060_001 | Banana | nucleus | 23.31 | 31.15 |
| GSMUA_Achr11P... | Banana | nucleus | 24.54 | 30.53 |
| GSMUA_Achr9P04960_001 | Banana | nucleus | 36.5 | 29.97 |
| GSMUA_Achr1P02710_001 | Banana | nucleus | 24.85 | 29.78 |
| GSMUA_AchrUn_... | Banana | nucleus | 23.62 | 29.5 |
| GSMUA_Achr10P... | Banana | cytosol | 23.62 | 28.84 |
| GSMUA_Achr4P32010_001 | Banana | nucleus | 25.15 | 28.57 |
| GSMUA_Achr1P18110_001 | Banana | cytosol, nucleus, plastid | 19.02 | 28.57 |
| GSMUA_Achr5P02170_001 | Banana | nucleus | 26.69 | 28.34 |
| GSMUA_Achr7P04030_001 | Banana | nucleus | 24.23 | 27.72 |
| GSMUA_Achr5P17060_001 | Banana | nucleus | 23.93 | 27.66 |
| GSMUA_Achr3P14720_001 | Banana | nucleus | 23.93 | 26.99 |
| GSMUA_Achr3P00560_001 | Banana | nucleus | 23.01 | 26.88 |
| GSMUA_Achr11P... | Banana | nucleus | 26.07 | 26.73 |
| GSMUA_Achr9P10040_001 | Banana | nucleus | 24.54 | 26.32 |
| GSMUA_Achr10P... | Banana | nucleus | 25.15 | 25.08 |
| GSMUA_Achr6P02680_001 | Banana | nucleus | 29.45 | 24.94 |
| GSMUA_Achr10P... | Banana | nucleus | 25.46 | 24.48 |
| GSMUA_Achr7P23650_001 | Banana | nucleus | 25.77 | 24.14 |
| GSMUA_Achr3P21690_001 | Banana | nucleus | 25.77 | 23.6 |
| GSMUA_Achr11P... | Banana | nucleus | 23.93 | 23.28 |
| GSMUA_Achr10P... | Banana | cytosol | 28.83 | 22.27 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSMUA_Achr9G19520_001 |
| EnsemblPlants:GSMUA_Achr9P19520_001 | EnsemblPlants:GSMUA_Achr9T19520_001 | InterPro:IPR003441 | InterPro:IPR036093 | UniProt:M0U1Q9 | InterPro:NAC-dom |
| InterPro:NAC_dom_sf | PFAM:PF02365 | PFscan:PS51005 | PANTHER:PTHR45430 | PANTHER:PTHR45430:SF1 | SUPFAM:SSF101941 |
| UniParc:UPI0002949928 | SEG:seg | : | : | : | : |
Description
Whole genome shotgun sequence of line PN40024, scaffold_14.assembly12x (Fragment) [Source:GMGC_GENE;Acc:GSMUA_Achr9G19520_001]
Coordinates
chr9:+:21085959..21088022
Molecular Weight (calculated)
36162.3 Da
IEP (calculated)
9.733
GRAVY (calculated)
-0.819
Length
326 amino acids
Sequence
(BLAST)
(BLAST)
001: MKHQPQQQQQ PPPQPHLPPG FRFHPTDEEL VVHYLKKKAA SAPLPVAIIT EVDLYKFDPW ELPGKASFGE QEWYFFSPRD RKYPNGARPN RAATSGYWKA
101: TGTDKPVLTS GGNQVKVGVK KALVFYRGRP PRGIKTNWIM HEYRLADASS RPPHGGHMAN KKRGGSLRLD DWVLCRIYKK NNTQQTAATG GQPDSGPLPQ
201: RPPTNYNALL ENDETFFEGL LANEVGLPNP LASAYWIDST DIAAPSAKRF HTGDGNSSSS AANKNNTSSY SNGSATNDDG GHENQMILNQ MPHGATFHDQ
301: MMLRQLRDGG AIFQQPYQLP GVNWSS
101: TGTDKPVLTS GGNQVKVGVK KALVFYRGRP PRGIKTNWIM HEYRLADASS RPPHGGHMAN KKRGGSLRLD DWVLCRIYKK NNTQQTAATG GQPDSGPLPQ
201: RPPTNYNALL ENDETFFEGL LANEVGLPNP LASAYWIDST DIAAPSAKRF HTGDGNSSSS AANKNNTSSY SNGSATNDDG GHENQMILNQ MPHGATFHDQ
301: MMLRQLRDGG AIFQQPYQLP GVNWSS
001: MENMGDSSIG PGHPHLPPGF RFHPTDEELV VHYLKKKADS VPLPVSIIAE IDLYKFDPWE LPSKASFGEH EWYFFSPRDR KYPNGVRPNR AATSGYWKAT
101: GTDKPIFTCN SHKVGVKKAL VFYGGKPPKG IKTDWIMHEY RLTDGNLSTA AKPPDLTTTR KNSLRLDDWV LCRIYKKNSS QRPTMERVLL REDLMEGMLS
201: KSSANSSSTS VLDNNDNNNN NNEEHFFDGM VVSSDKRSLC GQYRMGHEAS GSSSFGSFLS SKRFHHTGDL NNDNYNVSFV SMLSEIPQSS GFHANGVMDT
301: TSSLADHGVL RQAFQLPNMN WHS
101: GTDKPIFTCN SHKVGVKKAL VFYGGKPPKG IKTDWIMHEY RLTDGNLSTA AKPPDLTTTR KNSLRLDDWV LCRIYKKNSS QRPTMERVLL REDLMEGMLS
201: KSSANSSSTS VLDNNDNNNN NNEEHFFDGM VVSSDKRSLC GQYRMGHEAS GSSSFGSFLS SKRFHHTGDL NNDNYNVSFV SMLSEIPQSS GFHANGVMDT
301: TSSLADHGVL RQAFQLPNMN WHS
Arabidopsis Description
NAC025NAC transcription factor 25 [Source:UniProtKB/Swiss-Prot;Acc:Q8GY42]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.