Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_01s0026g02360.t01 | Wine grape | nucleus | 59.22 | 56.86 |
| PGSC0003DMT400080307 | Potato | nucleus | 54.81 | 54.52 |
| Solyc05g007550.1.1 | Tomato | nucleus | 54.03 | 53.33 |
| KRG99080 | Soybean | nucleus | 52.47 | 50.37 |
| KRH45921 | Soybean | nucleus | 53.77 | 50.12 |
| GSMUA_Achr10P... | Banana | cytosol | 54.03 | 49.29 |
| GSMUA_Achr7P21770_001 | Banana | nucleus | 22.86 | 44.0 |
| GSMUA_Achr4P23030_001 | Banana | nucleus | 28.57 | 44.0 |
| GSMUA_Achr7P00860_001 | Banana | nucleus | 28.57 | 41.98 |
| GSMUA_Achr10P... | Banana | cytosol | 28.57 | 41.2 |
| GSMUA_Achr9P10040_001 | Banana | nucleus | 30.13 | 38.16 |
| GSMUA_Achr4P32010_001 | Banana | nucleus | 27.53 | 36.93 |
| GSMUA_Achr1P02710_001 | Banana | nucleus | 25.45 | 36.03 |
| GSMUA_Achr5P02170_001 | Banana | nucleus | 28.57 | 35.83 |
| GSMUA_Achr5P17060_001 | Banana | nucleus | 26.23 | 35.82 |
| GSMUA_AchrUn_... | Banana | nucleus | 24.16 | 35.63 |
| GSMUA_Achr5P19060_001 | Banana | nucleus | 22.34 | 35.25 |
| GSMUA_Achr11P... | Banana | nucleus | 23.38 | 34.35 |
| GSMUA_Achr3P14720_001 | Banana | nucleus | 25.71 | 34.26 |
| GSMUA_Achr6P25380_001 | Banana | nucleus | 24.16 | 33.94 |
| GSMUA_Achr10P... | Banana | nucleus | 22.34 | 33.73 |
| GSMUA_Achr4P02390_001 | Banana | nucleus | 23.12 | 33.71 |
| GSMUA_Achr3P00560_001 | Banana | nucleus | 23.64 | 32.62 |
| GSMUA_Achr6P32330_001 | Banana | cytosol | 22.6 | 32.22 |
| GSMUA_Achr10P... | Banana | nucleus | 25.19 | 32.12 |
| GSMUA_Achr6P18720_001 | Banana | nucleus | 22.86 | 32.12 |
| GSMUA_Achr5P07590_001 | Banana | nucleus | 24.16 | 32.07 |
| GSMUA_Achr7P23250_001 | Banana | nucleus | 22.08 | 31.72 |
| GSMUA_Achr11P... | Banana | nucleus | 25.97 | 31.45 |
| GSMUA_Achr7P04030_001 | Banana | nucleus | 22.6 | 30.53 |
| GSMUA_Achr11P... | Banana | nucleus | 26.49 | 30.45 |
| GSMUA_Achr10P... | Banana | nucleus | 26.75 | 30.38 |
| GSMUA_Achr4P10310_001 | Banana | nucleus | 23.12 | 30.38 |
| GSMUA_Achr7P21780_001 | Banana | nucleus | 23.38 | 30.2 |
| GSMUA_Achr10P... | Banana | nucleus | 25.45 | 29.97 |
| GSMUA_Achr7P23650_001 | Banana | nucleus | 27.01 | 29.89 |
| GSMUA_AchrUn_... | Banana | nucleus | 25.19 | 29.66 |
| GSMUA_Achr9P19520_001 | Banana | nucleus | 24.94 | 29.45 |
| GSMUA_Achr4P02380_001 | Banana | nucleus | 25.45 | 29.34 |
| GSMUA_Achr6P17720_001 | Banana | nucleus | 22.08 | 29.31 |
| GSMUA_Achr1P18110_001 | Banana | cytosol, nucleus, plastid | 16.36 | 29.03 |
| GSMUA_Achr10P... | Banana | cytosol | 22.86 | 28.95 |
| GSMUA_Achr3P21690_001 | Banana | nucleus | 26.75 | 28.93 |
| GSMUA_Achr6P32320_001 | Banana | nucleus | 25.19 | 28.12 |
| GSMUA_Achr1P08860_001 | Banana | nucleus | 25.19 | 27.02 |
| GSMUA_Achr3P18010_001 | Banana | nucleus | 25.45 | 26.63 |
| GSMUA_Achr3P18990_001 | Banana | plastid | 22.34 | 25.83 |
| GSMUA_Achr9P04960_001 | Banana | nucleus | 24.42 | 23.68 |
| CDY54324 | Canola | extracellular | 15.06 | 20.94 |
| CDY16201 | Canola | plastid | 14.03 | 20.53 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009719 |
| GO:GO:0009733 | GO:GO:0009987 | GO:GO:0045770 | GO:GO:0048103 | GO:GO:0048829 | EnsemblPlantsGene:GSMUA_Achr6G02680_001 |
| EnsemblPlants:GSMUA_Achr6P02680_001 | EnsemblPlants:GSMUA_Achr6T02680_001 | InterPro:IPR003441 | InterPro:IPR036093 | UniProt:M0T3L6 | InterPro:NAC-dom |
| InterPro:NAC_dom_sf | PFAM:PF02365 | PFscan:PS51005 | PANTHER:PTHR44574 | SUPFAM:SSF101941 | UniParc:UPI000295FBBA |
| SEG:seg | : | : | : | : | : |
Description
no apical meristem protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr6G02680_001]
Coordinates
chr6:+:1737990..1739380
Molecular Weight (calculated)
43659.8 Da
IEP (calculated)
8.338
GRAVY (calculated)
-0.556
Length
385 amino acids
Sequence
(BLAST)
(BLAST)
001: MDERSHDMEK GDEVILPGFR FHPTDEELVS FYLKRKVQQR PLSIELIRQL DIYKYDPWDL PKLATTGEKE WYFYCPRDRK YRNSTRPNRV TGAGFWKATG
101: TDRPIYSSEG SKCIGLKKSL VFYKGRAAKG IKTDWMMHEF RLPSLTDSSL FKRPLDKNIP ANDSWAICRI FKKTNSVAQR ALSHSWVSPQ PEATEPDLFS
201: ISRAAHSIHF GSEMVSCITE AGSAPAIQVG CSSQQQQQQQ HNTIISYPPL DFSCYRPIDL GHCRPPPSVQ MPTNFTFSPA EMQLTSKCTM DVTSMLLNLS
301: PAILGDVEKA SHMDFLQQPQ QCNEFAKMVN ACGLNSNRWG GSRKSSVDFP FGLPTMFSDE WKPNLPLNSS SYPSEISTSY STNKC
101: TDRPIYSSEG SKCIGLKKSL VFYKGRAAKG IKTDWMMHEF RLPSLTDSSL FKRPLDKNIP ANDSWAICRI FKKTNSVAQR ALSHSWVSPQ PEATEPDLFS
201: ISRAAHSIHF GSEMVSCITE AGSAPAIQVG CSSQQQQQQQ HNTIISYPPL DFSCYRPIDL GHCRPPPSVQ MPTNFTFSPA EMQLTSKCTM DVTSMLLNLS
301: PAILGDVEKA SHMDFLQQPQ QCNEFAKMVN ACGLNSNRWG GSRKSSVDFP FGLPTMFSDE WKPNLPLNSS SYPSEISTSY STNKC
001: MGDRNNDGDQ KMEDVLLPGF RFHPTDEELV SFYLKRKVQH NPLSIELIRQ LDIYKYDPWD LPKFAMTGEK EWYFYCPRDR KYRNSSRPNR VTGAGFWKAT
101: GTDRPIYSSE GNKCIGLKKS LVFYKGRAAK GVKTDWMMHE FRLPSLSEPS PPSKRFFDSP VSPNDSWAIC RIFKKTNTTT LRALSHSFVS SLPPETSTDT
201: MSNQKQSNTY HFSSDKILKP SSHFQFHHEN MNTPKTSNST TPSVPTISPF SYLDFTSYDK PTNVFNPVSC LDQQYLTNLF LATQETQPQF PRLPSSNEIP
301: SFLLNTSSDS TFLGEFTSHI DLSAVLAQEQ CPPLVSLPQE YQETGFEGNG IMKNMRGSNE DHLGDHCDTL RFDDFTSTIN ENHRHHQDLK QNMTLLESYY
401: SSLSSINSDL PACFSSTT
101: GTDRPIYSSE GNKCIGLKKS LVFYKGRAAK GVKTDWMMHE FRLPSLSEPS PPSKRFFDSP VSPNDSWAIC RIFKKTNTTT LRALSHSFVS SLPPETSTDT
201: MSNQKQSNTY HFSSDKILKP SSHFQFHHEN MNTPKTSNST TPSVPTISPF SYLDFTSYDK PTNVFNPVSC LDQQYLTNLF LATQETQPQF PRLPSSNEIP
301: SFLLNTSSDS TFLGEFTSHI DLSAVLAQEQ CPPLVSLPQE YQETGFEGNG IMKNMRGSNE DHLGDHCDTL RFDDFTSTIN ENHRHHQDLK QNMTLLESYY
401: SSLSSINSDL PACFSSTT
Arabidopsis Description
FEZProtein FEZ [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVH0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.