Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 1
- extracellular 5
- endoplasmic reticulum 3
- vacuole 3
- plasma membrane 3
- golgi 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY16201 | Canola | plastid | 88.45 | 93.16 |
| CDY46433 | Canola | nucleus | 50.18 | 33.74 |
| CDY65270 | Canola | nucleus | 47.29 | 33.16 |
| CDY01755 | Canola | nucleus | 35.74 | 24.94 |
| CDX95910 | Canola | nucleus | 35.74 | 24.21 |
| VIT_01s0026g02360.t01 | Wine grape | nucleus | 29.24 | 20.2 |
| Solyc05g007550.1.1 | Tomato | nucleus | 23.1 | 16.41 |
| PGSC0003DMT400080307 | Potato | nucleus | 22.74 | 16.28 |
| KRH45921 | Soybean | nucleus | 24.19 | 16.22 |
| KRG99080 | Soybean | nucleus | 23.47 | 16.21 |
| GSMUA_Achr6P02680_001 | Banana | nucleus | 20.94 | 15.06 |
| CDX67438 | Canola | nucleus | 12.64 | 10.45 |
| CDY11662 | Canola | nucleus | 12.64 | 10.45 |
| CDY14865 | Canola | nucleus | 9.75 | 9.75 |
| CDY30373 | Canola | nucleus | 9.75 | 9.75 |
| CDX92828 | Canola | nucleus | 9.03 | 8.33 |
| CDX89253 | Canola | nucleus | 9.03 | 8.33 |
| CDY29303 | Canola | nucleus | 9.03 | 8.33 |
| CDY29836 | Canola | nucleus | 9.03 | 8.33 |
| CDY55499 | Canola | nucleus | 7.94 | 7.89 |
| CDY53654 | Canola | nucleus | 7.94 | 7.89 |
| CDY64562 | Canola | nucleus | 7.22 | 6.8 |
| CDY31385 | Canola | cytosol | 7.58 | 6.58 |
| CDX71329 | Canola | endoplasmic reticulum, extracellular | 7.22 | 6.51 |
| CDY47486 | Canola | nucleus | 6.5 | 6.45 |
| CDY26794 | Canola | nucleus | 6.5 | 6.45 |
| CDY47485 | Canola | nucleus | 6.5 | 6.45 |
| CDY43391 | Canola | nucleus | 6.86 | 6.44 |
| CDY42902 | Canola | nucleus | 6.5 | 6.43 |
| CDX82569 | Canola | nucleus | 6.86 | 6.29 |
| CDY24238 | Canola | nucleus | 6.86 | 6.19 |
| CDX75833 | Canola | nucleus | 6.5 | 6.06 |
| CDY02222 | Canola | nucleus | 6.14 | 6.05 |
| CDY39487 | Canola | nucleus | 6.14 | 6.05 |
| CDY20109 | Canola | nucleus | 6.86 | 5.99 |
| CDY21844 | Canola | nucleus | 6.86 | 5.99 |
| CDX95931 | Canola | cytosol | 5.78 | 5.93 |
| CDY40930 | Canola | cytosol | 5.78 | 5.93 |
| CDY50880 | Canola | nucleus | 6.86 | 5.85 |
| CDX82432 | Canola | nucleus | 5.05 | 5.67 |
| CDX98560 | Canola | nucleus | 6.5 | 5.62 |
| CDX97674 | Canola | nucleus | 6.5 | 5.61 |
| CDY22671 | Canola | nucleus | 3.97 | 5.53 |
| CDX82430 | Canola | nucleus | 3.97 | 5.53 |
| CDY69545 | Canola | nucleus | 6.14 | 5.45 |
| CDY29983 | Canola | nucleus | 6.86 | 5.35 |
| CDX90054 | Canola | nucleus | 5.42 | 5.26 |
| CDY15158 | Canola | nucleus | 5.42 | 5.24 |
| CDY60122 | Canola | nucleus | 6.14 | 5.2 |
| CDX84050 | Canola | nucleus | 3.61 | 5.18 |
| CDY07348 | Canola | nucleus | 5.05 | 5.17 |
| CDY51500 | Canola | nucleus | 5.05 | 5.15 |
| CDY53806 | Canola | nucleus | 5.78 | 5.03 |
| CDX81120 | Canola | nucleus | 4.33 | 4.98 |
| CDX78352 | Canola | cytosol, nucleus, plastid | 4.69 | 4.96 |
| CDY56427 | Canola | nucleus | 5.78 | 4.89 |
| CDY20131 | Canola | nucleus | 6.14 | 4.86 |
| CDX83510 | Canola | nucleus | 8.66 | 4.71 |
| CDY42810 | Canola | nucleus | 8.66 | 4.71 |
| CDX69919 | Canola | nucleus | 4.69 | 4.68 |
| CDX97675 | Canola | nucleus | 5.78 | 4.66 |
| CDY23551 | Canola | nucleus | 6.14 | 4.53 |
| CDX98562 | Canola | nucleus | 5.78 | 4.46 |
| CDY12886 | Canola | nucleus | 5.05 | 4.36 |
| CDY40970 | Canola | nucleus | 5.05 | 4.35 |
| CDY21567 | Canola | nucleus | 4.33 | 4.32 |
| CDY40732 | Canola | cytosol, nucleus, plastid | 3.97 | 4.26 |
| CDY40894 | Canola | nucleus | 3.97 | 4.23 |
| CDY38346 | Canola | cytosol, nucleus, plastid | 3.97 | 4.23 |
| CDY44788 | Canola | cytosol, nucleus, plastid | 3.97 | 4.2 |
| CDY31350 | Canola | nucleus | 3.97 | 4.15 |
| CDY39846 | Canola | mitochondrion | 3.97 | 3.74 |
| CDY41537 | Canola | nucleus | 3.25 | 3.6 |
| CDX84443 | Canola | nucleus | 3.25 | 3.57 |
| CDY17437 | Canola | nucleus | 4.69 | 3.2 |
| CDY04129 | Canola | nucleus | 4.69 | 3.19 |
| CDY03050 | Canola | nucleus | 4.69 | 3.14 |
| CDY17595 | Canola | nucleus | 4.69 | 3.12 |
| CDY09368 | Canola | nucleus | 4.33 | 2.96 |
| CDY15835 | Canola | nucleus | 4.33 | 2.95 |
| CDY26031 | Canola | cytosol | 1.08 | 1.99 |
| CDX82429 | Canola | plastid | 0.72 | 1.87 |
| CDY26032 | Canola | cytosol | 1.08 | 1.86 |
Protein Annotations
| EnsemblPlants:CDY54324 | EnsemblPlantsGene:GSBRNA2T00013828001 | PANTHER:PTHR44574 | PANTHER:PTHR44574:SF4 | ProteinID:CDY54324 | ProteinID:CDY54324.1 |
| UniParc:UPI0004EF113C | UniProt:A0A078IYA3 | MapMan:35.1 | : | : | : |
Description
BnaCnng26700DBnaCnng26700D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IYA3]
Coordinates
chrLK033304:-:64563..65396
Molecular Weight (calculated)
30950.1 Da
IEP (calculated)
5.455
GRAVY (calculated)
-0.345
Length
277 amino acids
Sequence
(BLAST)
(BLAST)
001: MTLIVNIVYA TRCLLLIQNL YGSLQDSWAI CRIFKKSNTT TLKALSHSFV SSLPSDTSID TMSNQKPSNT SHFSSDLKTS SHFQFHHENT NKIPKTSSST
101: TPLAASISPF SYLDFTSYEP TNDFNPVSCL DQQYLTNLFL APQEIQAQFP RLASSNEFPS FLLNMPSSYS SFLGECTGKI DLSAVLAQEQ CPDLVSLPQE
201: YQEKGLEGNG EMRNMHSFNE DLHSHCATLR FGDIASTVEE KHPHHYEDVK HNMTLLESYY SSLPSVNGDL PACFSTT
101: TPLAASISPF SYLDFTSYEP TNDFNPVSCL DQQYLTNLFL APQEIQAQFP RLASSNEFPS FLLNMPSSYS SFLGECTGKI DLSAVLAQEQ CPDLVSLPQE
201: YQEKGLEGNG EMRNMHSFNE DLHSHCATLR FGDIASTVEE KHPHHYEDVK HNMTLLESYY SSLPSVNGDL PACFSTT
001: MGDRNNDGDQ KMEDVLLPGF RFHPTDEELV SFYLKRKVQH NPLSIELIRQ LDIYKYDPWD LPKFAMTGEK EWYFYCPRDR KYRNSSRPNR VTGAGFWKAT
101: GTDRPIYSSE GNKCIGLKKS LVFYKGRAAK GVKTDWMMHE FRLPSLSEPS PPSKRFFDSP VSPNDSWAIC RIFKKTNTTT LRALSHSFVS SLPPETSTDT
201: MSNQKQSNTY HFSSDKILKP SSHFQFHHEN MNTPKTSNST TPSVPTISPF SYLDFTSYDK PTNVFNPVSC LDQQYLTNLF LATQETQPQF PRLPSSNEIP
301: SFLLNTSSDS TFLGEFTSHI DLSAVLAQEQ CPPLVSLPQE YQETGFEGNG IMKNMRGSNE DHLGDHCDTL RFDDFTSTIN ENHRHHQDLK QNMTLLESYY
401: SSLSSINSDL PACFSSTT
101: GTDRPIYSSE GNKCIGLKKS LVFYKGRAAK GVKTDWMMHE FRLPSLSEPS PPSKRFFDSP VSPNDSWAIC RIFKKTNTTT LRALSHSFVS SLPPETSTDT
201: MSNQKQSNTY HFSSDKILKP SSHFQFHHEN MNTPKTSNST TPSVPTISPF SYLDFTSYDK PTNVFNPVSC LDQQYLTNLF LATQETQPQF PRLPSSNEIP
301: SFLLNTSSDS TFLGEFTSHI DLSAVLAQEQ CPPLVSLPQE YQETGFEGNG IMKNMRGSNE DHLGDHCDTL RFDDFTSTIN ENHRHHQDLK QNMTLLESYY
401: SSLSSINSDL PACFSSTT
Arabidopsis Description
FEZProtein FEZ [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVH0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.