Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G08790.1 | CDX74635 | AT5G35750.1 | 18642946 |
| AT5G08790.1 | CDY47297 | AT5G35750.1 | 18642946 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX69919 | Canola | nucleus | 96.04 | 96.04 |
| AT5G08790.1 | Thale cress | nucleus | 92.81 | 91.17 |
| CDX78352 | Canola | cytosol, nucleus, plastid | 84.53 | 89.69 |
| CDY44788 | Canola | cytosol, nucleus, plastid | 84.53 | 89.69 |
| CDY40732 | Canola | cytosol, nucleus, plastid | 83.09 | 89.53 |
| CDX81120 | Canola | nucleus | 75.54 | 87.14 |
| CDY41537 | Canola | nucleus | 71.22 | 79.2 |
| CDX84443 | Canola | nucleus | 70.5 | 77.78 |
| CDY31350 | Canola | nucleus | 74.1 | 77.74 |
| CDY39846 | Canola | mitochondrion | 74.1 | 70.07 |
| CDY26031 | Canola | cytosol | 34.53 | 63.58 |
| KRH59618 | Soybean | nucleus | 66.19 | 61.74 |
| KRH63977 | Soybean | nucleus | 63.67 | 60.82 |
| KRH53959 | Soybean | nucleus | 63.31 | 59.66 |
| CDY15158 | Canola | nucleus | 61.15 | 59.44 |
| CDX90054 | Canola | nucleus | 60.79 | 59.3 |
| CDY26032 | Canola | cytosol | 34.17 | 59.01 |
| VIT_07s0031g02610.t01 | Wine grape | nucleus | 61.51 | 58.16 |
| GSMUA_Achr10P... | Banana | nucleus | 53.24 | 58.04 |
| Solyc04g009440.2.1 | Tomato | nucleus | 62.59 | 57.81 |
| CDY40894 | Canola | nucleus | 53.96 | 57.69 |
| PGSC0003DMT400082472 | Potato | nucleus | 62.59 | 57.43 |
| CDY38346 | Canola | cytosol, nucleus, plastid | 53.24 | 56.92 |
| KXG33829 | Sorghum | nucleus | 57.91 | 55.33 |
| GSMUA_Achr6P18720_001 | Banana | nucleus | 54.32 | 55.11 |
| GSMUA_Achr6P25380_001 | Banana | nucleus | 54.32 | 55.11 |
| CDX82430 | Canola | nucleus | 39.21 | 54.77 |
| TraesCS3B01G439600.1 | Wheat | nucleus | 58.27 | 54.36 |
| Zm00001d042609_P001 | Maize | cytosol, mitochondrion, nucleus | 57.55 | 54.24 |
| TraesCS3A01G406000.1 | Wheat | nucleus | 58.27 | 54.18 |
| TraesCS3D01G401200.1 | Wheat | nucleus | 58.27 | 54.18 |
| HORVU1Hr1G063740.1 | Barley | nucleus | 56.47 | 53.58 |
| TraesCS1A01G263700.1 | Wheat | nucleus | 56.12 | 53.24 |
| GSMUA_Achr7P23250_001 | Banana | nucleus | 51.08 | 52.99 |
| Os01t0884300-01 | Rice | nucleus | 57.55 | 52.81 |
| CDY22671 | Canola | nucleus | 37.77 | 52.76 |
| TraesCS1D01G263800.1 | Wheat | nucleus | 56.47 | 52.33 |
| CDX84050 | Canola | nucleus | 36.33 | 52.33 |
| TraesCS1B01G274300.1 | Wheat | nucleus | 56.12 | 51.83 |
| GSMUA_Achr6P17720_001 | Banana | nucleus | 53.24 | 51.03 |
| Os11t0184900-02 | Rice | nucleus | 56.12 | 47.42 |
| Zm00001d038221_P001 | Maize | plastid | 56.47 | 46.31 |
| KXG22031 | Sorghum | nucleus | 56.47 | 46.04 |
| TraesCS4A01G219700.1 | Wheat | nucleus | 55.4 | 45.97 |
| TraesCS4D01G094400.1 | Wheat | nucleus | 55.4 | 45.97 |
| TraesCS4B01G098200.1 | Wheat | nucleus | 55.04 | 45.81 |
| HORVU4Hr1G017430.7 | Barley | nucleus | 54.32 | 45.48 |
| GSMUA_Achr3P18990_001 | Banana | plastid | 53.96 | 45.05 |
| CDX82432 | Canola | nucleus | 39.57 | 44.53 |
| Zm00001d000112_P001 | Maize | nucleus | 55.04 | 42.62 |
| OQU83033 | Sorghum | nucleus | 53.96 | 39.06 |
| CDY40930 | Canola | cytosol | 37.05 | 38.15 |
| CDX92828 | Canola | nucleus | 41.01 | 38.0 |
| CDY29836 | Canola | nucleus | 41.01 | 38.0 |
| CDY69545 | Canola | nucleus | 42.45 | 37.82 |
| CDX95931 | Canola | cytosol | 36.69 | 37.78 |
| CDX75833 | Canola | nucleus | 40.29 | 37.71 |
| CDY42902 | Canola | nucleus | 37.77 | 37.5 |
| CDY07348 | Canola | nucleus | 36.33 | 37.27 |
| CDY51500 | Canola | nucleus | 36.33 | 37.13 |
| CDY53806 | Canola | nucleus | 42.45 | 37.11 |
| CDY29303 | Canola | nucleus | 39.93 | 37.0 |
| CDX89253 | Canola | nucleus | 39.57 | 36.67 |
| CDY12886 | Canola | nucleus | 42.09 | 36.45 |
| CDY40970 | Canola | nucleus | 42.09 | 36.34 |
| CDY20109 | Canola | nucleus | 41.01 | 35.96 |
| CDY21844 | Canola | nucleus | 41.01 | 35.96 |
| CDY56427 | Canola | nucleus | 41.73 | 35.47 |
| CDX98560 | Canola | nucleus | 40.29 | 35.0 |
| CDX97674 | Canola | nucleus | 40.29 | 34.89 |
| CDX97675 | Canola | nucleus | 42.45 | 34.4 |
| CDY20131 | Canola | nucleus | 42.45 | 33.71 |
| CDY50880 | Canola | nucleus | 39.21 | 33.54 |
| CDX98562 | Canola | nucleus | 42.09 | 32.59 |
| CDY29983 | Canola | nucleus | 40.29 | 31.55 |
| CDY30373 | Canola | nucleus | 29.14 | 29.24 |
| CDY26794 | Canola | nucleus | 29.14 | 29.03 |
| CDY47485 | Canola | nucleus | 29.14 | 29.03 |
| CDY47486 | Canola | nucleus | 29.14 | 29.03 |
| CDY14865 | Canola | nucleus | 28.78 | 28.88 |
| CDY53654 | Canola | nucleus | 28.78 | 28.67 |
| CDY55499 | Canola | nucleus | 28.78 | 28.67 |
| CDY64562 | Canola | nucleus | 29.14 | 27.55 |
| CDY43391 | Canola | nucleus | 29.14 | 27.46 |
| CDY39487 | Canola | nucleus | 27.7 | 27.4 |
| CDY02222 | Canola | nucleus | 27.34 | 27.05 |
| CDX82569 | Canola | nucleus | 29.14 | 26.82 |
| CDY24238 | Canola | nucleus | 29.5 | 26.71 |
| CDX71329 | Canola | endoplasmic reticulum, extracellular | 28.42 | 25.73 |
| CDY60122 | Canola | nucleus | 30.22 | 25.69 |
| CDY11662 | Canola | nucleus | 29.86 | 24.78 |
| CDY31385 | Canola | cytosol | 28.42 | 24.76 |
| CDX67438 | Canola | nucleus | 29.5 | 24.48 |
| CDY23551 | Canola | nucleus | 29.86 | 22.13 |
| CDY65270 | Canola | nucleus | 31.3 | 22.03 |
| CDY15835 | Canola | nucleus | 32.01 | 21.87 |
| CDY03050 | Canola | nucleus | 32.37 | 21.74 |
| CDY09368 | Canola | nucleus | 31.65 | 21.67 |
| CDY17437 | Canola | nucleus | 31.65 | 21.67 |
| CDY17595 | Canola | nucleus | 32.37 | 21.58 |
| CDY04129 | Canola | nucleus | 31.65 | 21.57 |
| CDY01755 | Canola | nucleus | 30.58 | 21.41 |
| CDY46433 | Canola | nucleus | 30.94 | 20.87 |
| CDX95910 | Canola | nucleus | 30.22 | 20.54 |
| CDX83510 | Canola | nucleus | 30.58 | 16.67 |
| CDY42810 | Canola | nucleus | 30.58 | 16.67 |
| CDX82429 | Canola | plastid | 2.16 | 5.61 |
| CDY54324 | Canola | extracellular | 4.32 | 4.33 |
| CDY16201 | Canola | plastid | 3.6 | 3.8 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | GO:A0A078G9A2 | UniProt:A0A078G9A2 | EnsemblPlants:CDY21567 | ProteinID:CDY21567 |
| ProteinID:CDY21567.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00016028001 | InterPro:IPR003441 |
| InterPro:IPR036093 | InterPro:NAC-dom | InterPro:NAC_dom_sf | PFAM:PF02365 | PFscan:PS51005 | PANTHER:PTHR31719 |
| PANTHER:PTHR31719:SF16 | SUPFAM:SSF101941 | UniParc:UPI0004EEE942 | SEG:seg | : | : |
Description
BnaC09g47250DBnaC09g47250D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G9A2]
Coordinates
chrLK032122:-:280451..281558
Molecular Weight (calculated)
31590.0 Da
IEP (calculated)
6.936
GRAVY (calculated)
-0.743
Length
278 amino acids
Sequence
(BLAST)
(BLAST)
001: MKAELNLPAG FRFHPTDEEL VKFYLCRKCS SEQISAPVIA EIDLYKFNPW ELPEMSLYGE KEWYFFSPRD RKYPNGSRPN RAAGTGYWKA TGADKPIGKP
101: KTLGIKKALV FYAGKAPKGI KTNWIMHEYR LANVDRSASV NKKNNLRLDD WVLCRIYNKK GTMEKYYPAD EKPRTATSMA DQSSSPFDTS DSTYPNDSSS
201: SGGHVVSPDA KEVQSEPKWG ELEDALEAFD TSMFGGSMDL LQSDGFVPQY LYQPDYFTPF QDMPQQKPFS NWSFAPHG
101: KTLGIKKALV FYAGKAPKGI KTNWIMHEYR LANVDRSASV NKKNNLRLDD WVLCRIYNKK GTMEKYYPAD EKPRTATSMA DQSSSPFDTS DSTYPNDSSS
201: SGGHVVSPDA KEVQSEPKWG ELEDALEAFD TSMFGGSMDL LQSDGFVPQY LYQPDYFTPF QDMPQQKPFS NWSFAPHG
001: MKSELNLPAG FRFHPTDEEL VKFYLCRKCA SEQISAPVIA EIDLYKFNPW ELPEMSLYGE KEWYFFSPRD RKYPNGSRPN RAAGTGYWKA TGADKPIGKP
101: KTLGIKKALV FYAGKAPKGI KTNWIMHEYR LANVDRSASV NKKNNLRLDD WVLCRIYNKK GTMEKYFPAD EKPRTTTMAE QSSSPFDTSD STYPTLQEDD
201: SSSSGGHGHV VSPDVLEVQS EPKWGELEDA LEAFDTSMFG SSMELLQPDA FVPQFLYQSD YFTSFQDPPE QKPFLNWSFA PQG
101: KTLGIKKALV FYAGKAPKGI KTNWIMHEYR LANVDRSASV NKKNNLRLDD WVLCRIYNKK GTMEKYFPAD EKPRTTTMAE QSSSPFDTSD STYPTLQEDD
201: SSSSGGHGHV VSPDVLEVQS EPKWGELEDA LEAFDTSMFG SSMELLQPDA FVPQFLYQSD YFTSFQDPPE QKPFLNWSFA PQG
Arabidopsis Description
NAC081Protein ATAF2 [Source:UniProtKB/Swiss-Prot;Acc:Q9C598]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.