Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY29836 | Canola | nucleus | 98.0 | 98.0 |
| CDY26031 | Canola | cytosol | 43.67 | 86.75 |
| CDX89253 | Canola | nucleus | 84.67 | 84.67 |
| CDY29303 | Canola | nucleus | 83.33 | 83.33 |
| CDY26032 | Canola | cytosol | 43.33 | 80.75 |
| CDX82432 | Canola | nucleus | 52.33 | 63.56 |
| VIT_19s0014g03290.t01 | Wine grape | nucleus | 65.0 | 58.56 |
| PGSC0003DMT400039670 | Potato | nucleus | 67.33 | 57.55 |
| Solyc12g013620.1.1 | Tomato | nucleus | 66.33 | 57.02 |
| CDX75833 | Canola | nucleus | 56.33 | 56.9 |
| CDY20109 | Canola | nucleus | 58.67 | 55.52 |
| CDY21844 | Canola | nucleus | 58.67 | 55.52 |
| CDY22671 | Canola | nucleus | 36.67 | 55.28 |
| CDX97674 | Canola | nucleus | 58.67 | 54.83 |
| CDX82430 | Canola | nucleus | 36.33 | 54.77 |
| CDX98560 | Canola | nucleus | 58.33 | 54.69 |
| KRH27201 | Soybean | nucleus | 62.67 | 54.49 |
| KRH22137 | Soybean | nucleus | 61.67 | 53.94 |
| CDY40732 | Canola | cytosol, nucleus, plastid | 38.0 | 44.19 |
| CDY41537 | Canola | nucleus | 36.67 | 44.0 |
| CDY44788 | Canola | cytosol, nucleus, plastid | 38.0 | 43.51 |
| CDX84443 | Canola | nucleus | 36.33 | 43.25 |
| CDX78352 | Canola | cytosol, nucleus, plastid | 37.33 | 42.75 |
| CDY40894 | Canola | nucleus | 37.0 | 42.69 |
| CDX90054 | Canola | nucleus | 40.0 | 42.11 |
| CDY38346 | Canola | cytosol, nucleus, plastid | 36.33 | 41.92 |
| CDY31350 | Canola | nucleus | 37.0 | 41.89 |
| CDY15158 | Canola | nucleus | 39.67 | 41.61 |
| CDX81120 | Canola | nucleus | 33.33 | 41.49 |
| CDY42902 | Canola | nucleus | 38.33 | 41.07 |
| CDY21567 | Canola | nucleus | 38.0 | 41.01 |
| CDX69919 | Canola | nucleus | 38.0 | 41.01 |
| CDY40930 | Canola | cytosol | 36.67 | 40.74 |
| CDX95931 | Canola | cytosol | 36.67 | 40.74 |
| CDY07348 | Canola | nucleus | 36.0 | 39.85 |
| CDY51500 | Canola | nucleus | 36.0 | 39.71 |
| CDY69545 | Canola | nucleus | 39.67 | 38.14 |
| CDY12886 | Canola | nucleus | 40.67 | 38.01 |
| CDY40970 | Canola | nucleus | 40.67 | 37.89 |
| CDY50880 | Canola | nucleus | 41.0 | 37.85 |
| CDY39846 | Canola | mitochondrion | 37.0 | 37.76 |
| CDY53806 | Canola | nucleus | 39.67 | 37.42 |
| CDY56427 | Canola | nucleus | 39.0 | 35.78 |
| CDX84050 | Canola | nucleus | 22.67 | 35.23 |
| CDY14865 | Canola | nucleus | 32.0 | 34.66 |
| CDY29983 | Canola | nucleus | 40.67 | 34.37 |
| CDY30373 | Canola | nucleus | 31.67 | 34.3 |
| CDY20131 | Canola | nucleus | 39.67 | 34.0 |
| CDX97675 | Canola | nucleus | 38.67 | 33.82 |
| CDY53654 | Canola | nucleus | 30.67 | 32.97 |
| CDY55499 | Canola | nucleus | 30.67 | 32.97 |
| CDX98562 | Canola | nucleus | 38.0 | 31.75 |
| CDY47485 | Canola | nucleus | 27.67 | 29.75 |
| CDY47486 | Canola | nucleus | 27.67 | 29.75 |
| CDY26794 | Canola | nucleus | 27.67 | 29.75 |
| CDY02222 | Canola | nucleus | 27.0 | 28.83 |
| CDY39487 | Canola | nucleus | 27.0 | 28.83 |
| CDX67438 | Canola | nucleus | 32.0 | 28.66 |
| CDY43391 | Canola | nucleus | 28.0 | 28.47 |
| CDY64562 | Canola | nucleus | 27.67 | 28.23 |
| CDY11662 | Canola | nucleus | 31.33 | 28.06 |
| CDY24238 | Canola | nucleus | 28.67 | 28.01 |
| CDX71329 | Canola | endoplasmic reticulum, extracellular | 28.33 | 27.69 |
| CDX82569 | Canola | nucleus | 27.67 | 27.48 |
| CDY31385 | Canola | cytosol | 28.33 | 26.65 |
| CDY60122 | Canola | nucleus | 29.0 | 26.61 |
| CDY65270 | Canola | nucleus | 35.0 | 26.58 |
| CDY46433 | Canola | nucleus | 35.0 | 25.49 |
| CDY01755 | Canola | nucleus | 33.33 | 25.19 |
| CDX95910 | Canola | nucleus | 33.67 | 24.69 |
| CDY15835 | Canola | nucleus | 31.67 | 23.34 |
| CDY09368 | Canola | nucleus | 31.33 | 23.15 |
| CDY17437 | Canola | nucleus | 31.33 | 23.15 |
| CDY04129 | Canola | nucleus | 31.0 | 22.79 |
| CDY23551 | Canola | nucleus | 28.33 | 22.67 |
| CDY03050 | Canola | nucleus | 31.0 | 22.46 |
| CDY17595 | Canola | nucleus | 31.0 | 22.3 |
| CDY42810 | Canola | nucleus | 31.67 | 18.63 |
| CDX83510 | Canola | nucleus | 31.33 | 18.43 |
| CDY54324 | Canola | extracellular | 8.33 | 9.03 |
| CDY16201 | Canola | plastid | 7.67 | 8.75 |
| CDX82429 | Canola | plastid | 1.67 | 4.67 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | GO:A0A078DZT5 | EnsemblPlants:CDX92828 | ProteinID:CDX92828 | ProteinID:CDX92828.1 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00154660001 | InterPro:IPR003441 |
| InterPro:IPR036093 | InterPro:NAC-dom | InterPro:NAC_dom_sf | PFAM:PF02365 | PFscan:PS51005 | PANTHER:PTHR44908 |
| SUPFAM:SSF101941 | UniParc:UPI0004EEB268 | SEG:seg | : | : | : |
Description
BnaC07g40860D
Coordinates
chrLK031873:-:989844..991527
Molecular Weight (calculated)
33499.1 Da
IEP (calculated)
8.418
GRAVY (calculated)
-0.611
Length
300 amino acids
Sequence
(BLAST)
(BLAST)
001: MGVREMDPLA QLSLPPGFRF YPTDEELLVQ YLCRKVAGYH FSLQVIGDID LYKFDPWDLP SKALFGEKEW YFFSPRDRKY PNGSRPNRVA GSGYWKATGT
101: DKIITSDGHR VGIKKALVFY AGKAPKGTKT NWIMHEYRLV EHSRSHGSSK LDDWVLCRIY KKTSGSQRQA VPPVQPCREE HSTNGSSSSS SSHHDDVLDS
201: FPEMNDRSFN LPRVNSLRTL LNGNFDWASL AGLKPIPELA PASNGYGGYD AFRAAEGEAE SGLRNLQMNS SELTQSYGYS SSGLSSGGFG LSGQTFEFRH
101: DKIITSDGHR VGIKKALVFY AGKAPKGTKT NWIMHEYRLV EHSRSHGSSK LDDWVLCRIY KKTSGSQRQA VPPVQPCREE HSTNGSSSSS SSHHDDVLDS
201: FPEMNDRSFN LPRVNSLRTL LNGNFDWASL AGLKPIPELA PASNGYGGYD AFRAAEGEAE SGLRNLQMNS SELTQSYGYS SSGLSSGGFG LSGQTFEFRH
001: MGVREKDPLA QLSLPPGFRF YPTDEELLVQ YLCRKVAGYH FSLQVIGDID LYKFDPWDLP SKALFGEKEW YFFSPRDRKY PNGSRPNRVA GSGYWKATGT
101: DKIITADGRR VGIKKALVFY AGKAPKGTKT NWIMHEYRLI EHSRSHGSSK LDDWVLCRIY KKTSGSQRQA VTPVQACREE HSTNGSSSSS SSQLDDVLDS
201: FPEIKDQSFN LPRMNSLRTI LNGNFDWASL AGLNPIPELA PTNGLPSYGG YDAFRAAEGE AESGHVNRQQ NSSGLTQSFG YSSSGFGVSG QTFEFRQ
101: DKIITADGRR VGIKKALVFY AGKAPKGTKT NWIMHEYRLI EHSRSHGSSK LDDWVLCRIY KKTSGSQRQA VTPVQACREE HSTNGSSSSS SSQLDDVLDS
201: FPEIKDQSFN LPRMNSLRTI LNGNFDWASL AGLNPIPELA PTNGLPSYGG YDAFRAAEGE AESGHVNRQQ NSSGLTQSFG YSSSGFGVSG QTFEFRQ
Arabidopsis Description
RD26NAC (No Apical Meristem) domain transcriptional regulator superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4JIU9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.