Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX82430 | Canola | nucleus | 96.98 | 96.98 |
| CDY26031 | Canola | cytosol | 48.74 | 64.24 |
| CDY26032 | Canola | cytosol | 48.24 | 59.63 |
| CDY56427 | Canola | nucleus | 86.93 | 52.91 |
| Bra001597.1-P | Field mustard | nucleus | 92.46 | 52.57 |
| CDX97675 | Canola | nucleus | 87.94 | 51.02 |
| CDY20131 | Canola | nucleus | 87.44 | 49.71 |
| CDY69545 | Canola | nucleus | 76.88 | 49.04 |
| CDX98562 | Canola | nucleus | 87.94 | 48.75 |
| AT3G15510.1 | Thale cress | nucleus | 88.44 | 48.35 |
| CDY53806 | Canola | nucleus | 76.88 | 48.11 |
| VIT_19s0014g03300.t01 | Wine grape | nucleus | 78.39 | 44.19 |
| CDX82432 | Canola | nucleus | 54.77 | 44.13 |
| CDY41537 | Canola | nucleus | 54.77 | 43.6 |
| CDY12886 | Canola | nucleus | 69.35 | 42.99 |
| GSMUA_Achr9P19520_001 | Banana | nucleus | 70.35 | 42.94 |
| CDX84443 | Canola | nucleus | 54.27 | 42.86 |
| CDY40970 | Canola | nucleus | 69.35 | 42.86 |
| CDY40930 | Canola | cytosol | 57.79 | 42.59 |
| CDX95931 | Canola | cytosol | 57.79 | 42.59 |
| CDY07348 | Canola | nucleus | 57.79 | 42.44 |
| CDY51500 | Canola | nucleus | 57.79 | 42.28 |
| KRH22138 | Soybean | nucleus | 78.39 | 41.6 |
| PGSC0003DMT400064428 | Potato | nucleus | 73.37 | 41.6 |
| CDY40894 | Canola | nucleus | 54.27 | 41.54 |
| KRH27199 | Soybean | nucleus | 77.89 | 41.33 |
| CDY31350 | Canola | nucleus | 54.77 | 41.13 |
| Solyc10g006880.2.1 | Tomato | nucleus | 73.37 | 41.13 |
| CDY40732 | Canola | cytosol, nucleus, plastid | 53.27 | 41.09 |
| CDY38346 | Canola | cytosol, nucleus, plastid | 53.27 | 40.77 |
| CDY44788 | Canola | cytosol, nucleus, plastid | 53.27 | 40.46 |
| CDY42902 | Canola | nucleus | 56.78 | 40.36 |
| CDX78352 | Canola | cytosol, nucleus, plastid | 52.76 | 40.08 |
| CDX90054 | Canola | nucleus | 56.28 | 39.3 |
| CDY15158 | Canola | nucleus | 55.78 | 38.81 |
| GSMUA_Achr1P08860_001 | Banana | nucleus | 68.34 | 37.88 |
| CDX69919 | Canola | nucleus | 52.76 | 37.77 |
| CDY21567 | Canola | nucleus | 52.76 | 37.77 |
| CDX89253 | Canola | nucleus | 56.28 | 37.33 |
| CDY29303 | Canola | nucleus | 55.78 | 37.0 |
| CDX75833 | Canola | nucleus | 54.77 | 36.7 |
| CDX92828 | Canola | nucleus | 55.28 | 36.67 |
| CDX81120 | Canola | nucleus | 44.22 | 36.51 |
| CDY39846 | Canola | mitochondrion | 53.77 | 36.39 |
| CDY29836 | Canola | nucleus | 54.77 | 36.33 |
| CDY50880 | Canola | nucleus | 58.29 | 35.69 |
| TraesCS2D01G214100.1 | Wheat | nucleus | 69.85 | 34.84 |
| HORVU2Hr1G039640.2 | Barley | nucleus | 70.35 | 34.57 |
| TraesCS2B01G228900.1 | Wheat | nucleus | 70.35 | 34.48 |
| OQU90111 | Sorghum | nucleus | 72.36 | 34.45 |
| TraesCS2A01G201800.2 | Wheat | nucleus | 70.35 | 34.4 |
| CDY21844 | Canola | nucleus | 54.77 | 34.38 |
| Zm00001d021818_P002 | Maize | nucleus | 71.86 | 34.13 |
| CDY20109 | Canola | nucleus | 54.27 | 34.07 |
| CDX98560 | Canola | nucleus | 54.77 | 34.06 |
| TraesCS6D01G096300.1 | Wheat | nucleus | 69.85 | 33.82 |
| TraesCS6A01G108300.2 | Wheat | nucleus | 70.35 | 33.65 |
| CDX97674 | Canola | nucleus | 54.27 | 33.64 |
| HORVU6Hr1G019380.2 | Barley | plastid | 68.34 | 33.17 |
| CDX84050 | Canola | nucleus | 32.16 | 33.16 |
| CDY29983 | Canola | nucleus | 58.79 | 32.96 |
| Os07t0566500-01 | Rice | nucleus | 69.85 | 32.71 |
| CDY55499 | Canola | nucleus | 41.21 | 29.39 |
| CDY53654 | Canola | nucleus | 40.7 | 29.03 |
| CDY30373 | Canola | nucleus | 40.2 | 28.88 |
| CDY14865 | Canola | nucleus | 40.2 | 28.88 |
| CDY64562 | Canola | nucleus | 41.21 | 27.89 |
| CDY43391 | Canola | nucleus | 40.7 | 27.46 |
| CDY24238 | Canola | nucleus | 42.21 | 27.36 |
| CDY26794 | Canola | nucleus | 38.19 | 27.24 |
| CDY47485 | Canola | nucleus | 38.19 | 27.24 |
| CDY47486 | Canola | nucleus | 38.19 | 27.24 |
| CDY02222 | Canola | nucleus | 37.69 | 26.69 |
| CDY39487 | Canola | nucleus | 37.69 | 26.69 |
| CDX82569 | Canola | nucleus | 40.2 | 26.49 |
| CDY11662 | Canola | nucleus | 44.22 | 26.27 |
| CDX67438 | Canola | nucleus | 44.22 | 26.27 |
| CDY60122 | Canola | nucleus | 41.71 | 25.38 |
| CDX71329 | Canola | endoplasmic reticulum, extracellular | 37.69 | 24.43 |
| CDY31385 | Canola | cytosol | 37.69 | 23.51 |
| CDY65270 | Canola | nucleus | 45.23 | 22.78 |
| CDY23551 | Canola | nucleus | 41.21 | 21.87 |
| CDY01755 | Canola | nucleus | 42.71 | 21.41 |
| CDY46433 | Canola | nucleus | 44.22 | 21.36 |
| CDY09368 | Canola | nucleus | 43.22 | 21.18 |
| CDY15835 | Canola | nucleus | 43.22 | 21.13 |
| CDY17437 | Canola | nucleus | 42.71 | 20.94 |
| CDY04129 | Canola | nucleus | 42.71 | 20.83 |
| CDY03050 | Canola | nucleus | 42.71 | 20.53 |
| CDY17595 | Canola | nucleus | 42.71 | 20.38 |
| CDX95910 | Canola | nucleus | 41.71 | 20.29 |
| CDY42810 | Canola | nucleus | 40.2 | 15.69 |
| CDX83510 | Canola | nucleus | 40.2 | 15.69 |
| CDX82429 | Canola | plastid | 2.51 | 4.67 |
| CDY54324 | Canola | extracellular | 5.53 | 3.97 |
| CDY16201 | Canola | plastid | 4.52 | 3.42 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | GO:A0A078GBD0 | UniProt:A0A078GBD0 | EnsemblPlants:CDY22671 | ProteinID:CDY22671 |
| ProteinID:CDY22671.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00019342001 | InterPro:IPR003441 |
| InterPro:IPR036093 | InterPro:NAC-dom | InterPro:NAC_dom_sf | PFAM:PF02365 | PFscan:PS51005 | PANTHER:PTHR45430 |
| PANTHER:PTHR45430:SF1 | SUPFAM:SSF101941 | UniParc:UPI0004EF22A7 | SEG:seg | : | : |
Description
BnaC08g43050DBnaC08g43050D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GBD0]
Coordinates
chrLK032134:+:401071..402474
Molecular Weight (calculated)
22522.0 Da
IEP (calculated)
10.374
GRAVY (calculated)
-0.664
Length
199 amino acids
Sequence
(BLAST)
(BLAST)
001: MEITDSPGGS PPPQPNLPPG FRFHPTDEEL VVHYLKSKVA SAPLPVAIIG EVDLYKFDPW ELPAKASFGE QEWYFFSPRD RKYPNGARPN RAATSGYWKA
101: TGTDKLVLAS DGKLKVGVKK ALVFYSGKPP KGVKSDWIMH EYRLIDNKPN NRPPGCVFGN KRNSLRLDDW VLCRIYKKNN ASRHKKSSLV IKWTPSQRL
101: TGTDKLVLAS DGKLKVGVKK ALVFYSGKPP KGVKSDWIMH EYRLIDNKPN NRPPGCVFGN KRNSLRLDDW VLCRIYKKNN ASRHKKSSLV IKWTPSQRL
001: MESTDSSGGP PPPQPNLPPG FRFHPTDEEL VIHYLKRKAD SVPLPVAIIA DVDLYKFDPW ELPAKASFGE QEWYFFSPRD RKYPNGARPN RAATSGYWKA
101: TGTDKPVIST GGGGSKKVGV KKALVFYSGK PPKGVKSDWI MHEYRLTDNK PTHICDFGNK KNSLRLDDWV LCRIYKKNNS TASRHHHHLH HIHLDNDHHR
201: HDMMIDDDRF RHVPPGLHFP AIFSDNNDPT AIYDGGGGGY GGGSYSMNHC FASGSKQEQL FPPVMMMTSL NQDSGIGSSS SPSKRFNGGG VGDCSTSMAA
301: TPLMQNQGGI YQLPGLNWYS
101: TGTDKPVIST GGGGSKKVGV KKALVFYSGK PPKGVKSDWI MHEYRLTDNK PTHICDFGNK KNSLRLDDWV LCRIYKKNNS TASRHHHHLH HIHLDNDHHR
201: HDMMIDDDRF RHVPPGLHFP AIFSDNNDPT AIYDGGGGGY GGGSYSMNHC FASGSKQEQL FPPVMMMTSL NQDSGIGSSS SPSKRFNGGG VGDCSTSMAA
301: TPLMQNQGGI YQLPGLNWYS
Arabidopsis Description
NAC018NARS2 [Source:UniProtKB/TrEMBL;Acc:A0A178W6K4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.