Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 1
- plastid 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G08790.1 | CDX74635 | AT5G35750.1 | 18642946 |
| AT5G08790.1 | CDY47297 | AT5G35750.1 | 18642946 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY44788 | Canola | cytosol, nucleus, plastid | 95.74 | 94.27 |
| Bra028645.1-P | Field mustard | nucleus | 99.22 | 92.09 |
| CDX78352 | Canola | cytosol, nucleus, plastid | 88.37 | 87.02 |
| CDX69919 | Canola | nucleus | 91.09 | 84.53 |
| CDX81120 | Canola | nucleus | 78.29 | 83.82 |
| CDY21567 | Canola | nucleus | 89.53 | 83.09 |
| AT5G08790.1 | Thale cress | nucleus | 89.92 | 81.98 |
| CDY41537 | Canola | nucleus | 75.19 | 77.6 |
| CDX84443 | Canola | nucleus | 74.81 | 76.59 |
| CDY31350 | Canola | nucleus | 77.91 | 75.85 |
| CDY39846 | Canola | mitochondrion | 77.91 | 68.37 |
| CDY26031 | Canola | cytosol | 37.6 | 64.24 |
| CDY26032 | Canola | cytosol | 37.21 | 59.63 |
| KRH63977 | Soybean | nucleus | 65.5 | 58.08 |
| GSMUA_Achr10P... | Banana | nucleus | 57.36 | 58.04 |
| CDY40894 | Canola | nucleus | 58.14 | 57.69 |
| KRH59618 | Soybean | nucleus | 66.28 | 57.38 |
| CDY38346 | Canola | cytosol, nucleus, plastid | 57.36 | 56.92 |
| Solyc04g009440.2.1 | Tomato | nucleus | 66.28 | 56.81 |
| CDY15158 | Canola | nucleus | 62.79 | 56.64 |
| KRH53959 | Soybean | nucleus | 64.73 | 56.61 |
| VIT_07s0031g02610.t01 | Wine grape | nucleus | 64.34 | 56.46 |
| PGSC0003DMT400082472 | Potato | nucleus | 66.28 | 56.44 |
| CDX90054 | Canola | nucleus | 62.02 | 56.14 |
| CDX82430 | Canola | nucleus | 42.64 | 55.28 |
| GSMUA_Achr6P18720_001 | Banana | nucleus | 58.14 | 54.74 |
| KXG33829 | Sorghum | nucleus | 60.85 | 53.95 |
| GSMUA_Achr7P23250_001 | Banana | nucleus | 55.81 | 53.73 |
| GSMUA_Achr6P25380_001 | Banana | nucleus | 56.98 | 53.65 |
| CDY22671 | Canola | nucleus | 41.09 | 53.27 |
| Zm00001d042609_P001 | Maize | cytosol, mitochondrion, nucleus | 60.85 | 53.22 |
| TraesCS3B01G439600.1 | Wheat | nucleus | 60.85 | 52.68 |
| TraesCS3A01G406000.1 | Wheat | nucleus | 60.85 | 52.51 |
| TraesCS3D01G401200.1 | Wheat | nucleus | 60.85 | 52.51 |
| HORVU1Hr1G063740.1 | Barley | nucleus | 59.3 | 52.22 |
| TraesCS1A01G263700.1 | Wheat | nucleus | 58.91 | 51.88 |
| CDX84050 | Canola | nucleus | 38.76 | 51.81 |
| Os01t0884300-01 | Rice | nucleus | 60.47 | 51.49 |
| TraesCS1D01G263800.1 | Wheat | nucleus | 59.3 | 51.0 |
| TraesCS1B01G274300.1 | Wheat | nucleus | 58.91 | 50.5 |
| GSMUA_Achr6P17720_001 | Banana | nucleus | 55.81 | 49.66 |
| Os11t0184900-02 | Rice | nucleus | 58.53 | 45.9 |
| TraesCS4A01G219700.1 | Wheat | nucleus | 58.53 | 45.07 |
| TraesCS4D01G094400.1 | Wheat | nucleus | 58.53 | 45.07 |
| TraesCS4B01G098200.1 | Wheat | nucleus | 58.14 | 44.91 |
| HORVU4Hr1G017430.7 | Barley | nucleus | 57.75 | 44.88 |
| KXG22031 | Sorghum | nucleus | 59.3 | 44.87 |
| Zm00001d038221_P001 | Maize | plastid | 58.91 | 44.84 |
| CDX82432 | Canola | nucleus | 42.64 | 44.53 |
| GSMUA_Achr3P18990_001 | Banana | plastid | 56.98 | 44.14 |
| Zm00001d000112_P001 | Maize | nucleus | 58.14 | 41.78 |
| OQU83033 | Sorghum | nucleus | 56.59 | 38.02 |
| CDX92828 | Canola | nucleus | 44.19 | 38.0 |
| CDY29836 | Canola | nucleus | 44.19 | 38.0 |
| CDY40930 | Canola | cytosol | 39.53 | 37.78 |
| CDX75833 | Canola | nucleus | 43.41 | 37.71 |
| CDY69545 | Canola | nucleus | 45.35 | 37.5 |
| CDX95931 | Canola | cytosol | 39.15 | 37.41 |
| CDY12886 | Canola | nucleus | 46.12 | 37.07 |
| CDX89253 | Canola | nucleus | 43.02 | 37.0 |
| CDY29303 | Canola | nucleus | 43.02 | 37.0 |
| CDY40970 | Canola | nucleus | 46.12 | 36.96 |
| CDY07348 | Canola | nucleus | 38.76 | 36.9 |
| CDY51500 | Canola | nucleus | 38.76 | 36.76 |
| CDY53806 | Canola | nucleus | 44.96 | 36.48 |
| CDY42902 | Canola | nucleus | 39.15 | 36.07 |
| CDY20109 | Canola | nucleus | 43.41 | 35.33 |
| CDY21844 | Canola | nucleus | 43.41 | 35.33 |
| CDX98560 | Canola | nucleus | 43.8 | 35.31 |
| CDX97674 | Canola | nucleus | 43.8 | 35.2 |
| CDY56427 | Canola | nucleus | 43.8 | 34.56 |
| CDX97675 | Canola | nucleus | 45.35 | 34.11 |
| CDY20131 | Canola | nucleus | 44.96 | 33.14 |
| CDX98562 | Canola | nucleus | 44.96 | 32.31 |
| CDY50880 | Canola | nucleus | 40.31 | 32.0 |
| CDY29983 | Canola | nucleus | 41.09 | 29.86 |
| CDY30373 | Canola | nucleus | 31.4 | 29.24 |
| CDY14865 | Canola | nucleus | 31.01 | 28.88 |
| CDY53654 | Canola | nucleus | 31.01 | 28.67 |
| CDY55499 | Canola | nucleus | 31.01 | 28.67 |
| CDY26794 | Canola | nucleus | 30.62 | 28.32 |
| CDY47485 | Canola | nucleus | 30.62 | 28.32 |
| CDY47486 | Canola | nucleus | 30.62 | 28.32 |
| CDY64562 | Canola | nucleus | 31.01 | 27.21 |
| CDY43391 | Canola | nucleus | 31.01 | 27.12 |
| CDY39487 | Canola | nucleus | 29.46 | 27.05 |
| CDY02222 | Canola | nucleus | 29.07 | 26.69 |
| CDX82569 | Canola | nucleus | 31.01 | 26.49 |
| CDY24238 | Canola | nucleus | 31.4 | 26.38 |
| CDX71329 | Canola | endoplasmic reticulum, extracellular | 30.23 | 25.41 |
| CDY60122 | Canola | nucleus | 32.17 | 25.38 |
| CDY31385 | Canola | cytosol | 30.23 | 24.45 |
| CDY11662 | Canola | nucleus | 31.4 | 24.18 |
| CDX67438 | Canola | nucleus | 31.01 | 23.88 |
| CDY23551 | Canola | nucleus | 31.78 | 21.87 |
| CDY65270 | Canola | nucleus | 32.95 | 21.52 |
| CDY01755 | Canola | nucleus | 32.17 | 20.91 |
| CDY15835 | Canola | nucleus | 32.95 | 20.88 |
| CDY03050 | Canola | nucleus | 33.33 | 20.77 |
| CDY09368 | Canola | nucleus | 32.56 | 20.69 |
| CDY17437 | Canola | nucleus | 32.56 | 20.69 |
| CDY17595 | Canola | nucleus | 33.33 | 20.62 |
| CDY04129 | Canola | nucleus | 32.56 | 20.59 |
| CDY46433 | Canola | nucleus | 32.56 | 20.39 |
| CDX95910 | Canola | nucleus | 31.78 | 20.05 |
| CDX83510 | Canola | nucleus | 32.95 | 16.67 |
| CDY42810 | Canola | nucleus | 32.95 | 16.67 |
| CDX82429 | Canola | plastid | 2.33 | 5.61 |
| CDY54324 | Canola | extracellular | 4.26 | 3.97 |
| CDY16201 | Canola | plastid | 3.49 | 3.42 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | GO:A0A078HSB7 | UniProt:A0A078HSB7 | EnsemblPlants:CDY40732 | ProteinID:CDY40732 |
| ProteinID:CDY40732.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00071627001 | InterPro:IPR003441 |
| InterPro:IPR036093 | InterPro:NAC-dom | InterPro:NAC_dom_sf | PFAM:PF02365 | PFscan:PS51005 | PANTHER:PTHR31719 |
| PANTHER:PTHR31719:SF16 | SUPFAM:SSF101941 | UniParc:UPI0004EE360A | SEG:seg | : | : |
Description
BnaAnng05950DBnaAnng05950D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HSB7]
Coordinates
chrLK032478:+:54516..55840
Molecular Weight (calculated)
29479.6 Da
IEP (calculated)
6.551
GRAVY (calculated)
-0.738
Length
258 amino acids
Sequence
(BLAST)
(BLAST)
001: MKAGLNLPAG FRFHPTDEEL VQFYLCRKCA SEEISAPVIA EIDLYKFNPW ELPEMSLYGE KEWYFFSPRD RKYPNGSRPN RAAGTGYWKA TGADKPIGKP
101: KTLGIKKALV FYAGKAPKGI KTNWIMHEYR LANVDRSASA NKKNNLRLDD WVLCRIYNKK GTMEKYYPAD EKPMTDDSSS SGGRVVSPDA REVQSEPKWG
201: EFENAFDASM FGGGSMDLLQ SEDFVPQFLY QPSYEFNSWQ EDPPEQKPFL NWSFAPQG
101: KTLGIKKALV FYAGKAPKGI KTNWIMHEYR LANVDRSASA NKKNNLRLDD WVLCRIYNKK GTMEKYYPAD EKPMTDDSSS SGGRVVSPDA REVQSEPKWG
201: EFENAFDASM FGGGSMDLLQ SEDFVPQFLY QPSYEFNSWQ EDPPEQKPFL NWSFAPQG
001: MKSELNLPAG FRFHPTDEEL VKFYLCRKCA SEQISAPVIA EIDLYKFNPW ELPEMSLYGE KEWYFFSPRD RKYPNGSRPN RAAGTGYWKA TGADKPIGKP
101: KTLGIKKALV FYAGKAPKGI KTNWIMHEYR LANVDRSASV NKKNNLRLDD WVLCRIYNKK GTMEKYFPAD EKPRTTTMAE QSSSPFDTSD STYPTLQEDD
201: SSSSGGHGHV VSPDVLEVQS EPKWGELEDA LEAFDTSMFG SSMELLQPDA FVPQFLYQSD YFTSFQDPPE QKPFLNWSFA PQG
101: KTLGIKKALV FYAGKAPKGI KTNWIMHEYR LANVDRSASV NKKNNLRLDD WVLCRIYNKK GTMEKYFPAD EKPRTTTMAE QSSSPFDTSD STYPTLQEDD
201: SSSSGGHGHV VSPDVLEVQS EPKWGELEDA LEAFDTSMFG SSMELLQPDA FVPQFLYQSD YFTSFQDPPE QKPFLNWSFA PQG
Arabidopsis Description
NAC081Protein ATAF2 [Source:UniProtKB/Swiss-Prot;Acc:Q9C598]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.