Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d042609_P001 | Maize | cytosol, mitochondrion, nucleus | 95.53 | 94.24 |
| Os01t0884300-01 | Rice | nucleus | 88.66 | 85.15 |
| TraesCS3B01G439600.1 | Wheat | nucleus | 84.19 | 82.21 |
| TraesCS3D01G401200.1 | Wheat | nucleus | 84.19 | 81.94 |
| TraesCS3A01G406000.1 | Wheat | nucleus | 83.85 | 81.61 |
| KXG22031 | Sorghum | nucleus | 79.38 | 67.74 |
| KRH17977 | Soybean | nucleus | 59.79 | 64.93 |
| VIT_18s0001g02300.t01 | Wine grape | nucleus | 66.67 | 64.88 |
| KRH16387 | Soybean | nucleus | 61.17 | 63.57 |
| GSMUA_Achr6P25380_001 | Banana | nucleus | 59.79 | 63.5 |
| CDX90054 | Canola | nucleus | 61.86 | 63.16 |
| Bra033239.1-P | Field mustard | nucleus | 61.86 | 63.16 |
| PGSC0003DMT400023917 | Potato | nucleus | 62.89 | 62.89 |
| AT1G01720.1 | Thale cress | nucleus | 62.2 | 62.63 |
| CDY15158 | Canola | nucleus | 61.51 | 62.59 |
| Solyc11g017470.1.1 | Tomato | nucleus | 62.2 | 62.2 |
| Solyc06g060230.2.1 | Tomato | nucleus | 62.89 | 61.82 |
| PGSC0003DMT400045294 | Potato | nucleus | 62.54 | 61.49 |
| VIT_07s0031g02610.t01 | Wine grape | nucleus | 61.51 | 60.88 |
| AT1G77450.1 | Thale cress | cytosol, nucleus, plastid | 52.92 | 60.87 |
| CDY40732 | Canola | cytosol, nucleus, plastid | 53.95 | 60.85 |
| KRH64668 | Soybean | nucleus | 62.54 | 60.67 |
| KRH53247 | Soybean | nucleus | 62.2 | 60.54 |
| KRH63977 | Soybean | nucleus | 60.14 | 60.14 |
| KRH59618 | Soybean | nucleus | 61.51 | 60.07 |
| CDY41537 | Canola | nucleus | 51.55 | 60.0 |
| KRH53959 | Soybean | nucleus | 60.82 | 60.0 |
| Bra038663.1-P | Field mustard | nucleus | 51.55 | 60.0 |
| CDY40894 | Canola | nucleus | 53.26 | 59.62 |
| CDX84443 | Canola | nucleus | 51.55 | 59.52 |
| CDY44788 | Canola | cytosol, nucleus, plastid | 53.26 | 59.16 |
| CDX78352 | Canola | cytosol, nucleus, plastid | 53.26 | 59.16 |
| CDY38346 | Canola | cytosol, nucleus, plastid | 52.58 | 58.85 |
| Bra008309.1-P | Field mustard | cytosol, nucleus, plastid | 52.58 | 58.85 |
| Bra028645.1-P | Field mustard | nucleus | 56.01 | 58.63 |
| CDY31350 | Canola | nucleus | 53.26 | 58.49 |
| Bra029201.1-P | Field mustard | cytosol | 53.26 | 58.49 |
| Solyc04g009440.2.1 | Tomato | nucleus | 60.48 | 58.47 |
| GSMUA_Achr6P17720_001 | Banana | nucleus | 58.08 | 58.28 |
| CDY21567 | Canola | nucleus | 55.33 | 57.91 |
| PGSC0003DMT400082472 | Potato | nucleus | 60.14 | 57.76 |
| Bra006015.1-P | Field mustard | cytosol, nucleus, plastid | 55.33 | 57.5 |
| CDX81120 | Canola | nucleus | 47.42 | 57.26 |
| CDX69919 | Canola | nucleus | 54.64 | 57.19 |
| Bra009370.1-P | Field mustard | nucleus | 54.64 | 57.19 |
| AT5G08790.1 | Thale cress | nucleus | 55.33 | 56.89 |
| CDY39846 | Canola | mitochondrion | 52.92 | 52.38 |
| CDX84050 | Canola | nucleus | 34.71 | 52.33 |
| GSMUA_Achr3P18990_001 | Banana | plastid | 58.76 | 51.35 |
| AT5G63790.2 | Thale cress | cytosol | 53.95 | 48.76 |
| OQU83033 | Sorghum | nucleus | 59.79 | 45.31 |
| EER96087 | Sorghum | nucleus | 44.67 | 44.83 |
| EER93215 | Sorghum | nucleus | 45.02 | 41.07 |
| EES03797 | Sorghum | nucleus | 43.3 | 39.87 |
| EER99985 | Sorghum | nucleus | 38.14 | 31.36 |
| EER92326 | Sorghum | nucleus | 40.21 | 30.79 |
| KXG32136 | Sorghum | plastid | 38.49 | 29.47 |
| OQU90111 | Sorghum | nucleus | 41.92 | 29.19 |
| EER99924 | Sorghum | cytosol, nucleus, plastid | 38.83 | 29.12 |
| EES17466 | Sorghum | nucleus | 28.18 | 26.97 |
| EES07907 | Sorghum | plastid | 37.11 | 26.87 |
| EES16571 | Sorghum | nucleus | 38.83 | 26.34 |
| EER92917 | Sorghum | nucleus | 29.21 | 25.99 |
| EER95852 | Sorghum | nucleus | 29.21 | 24.78 |
| EES13251 | Sorghum | mitochondrion, nucleus | 31.27 | 24.33 |
| EER93360 | Sorghum | nucleus | 29.9 | 23.51 |
| EES13897 | Sorghum | nucleus | 30.58 | 23.18 |
| EES07261 | Sorghum | nucleus | 30.58 | 22.94 |
| EES01882 | Sorghum | nucleus | 33.68 | 22.17 |
| EES19541 | Sorghum | nucleus | 31.62 | 21.96 |
| OQU89481 | Sorghum | nucleus | 28.87 | 20.84 |
| KXG20943 | Sorghum | nucleus, plastid | 27.15 | 20.47 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | UniProt:A0A1B6Q7D2 | ProteinID:AQY17420.1 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0006950 | GO:GO:0007275 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009409 | GO:GO:0009605 | GO:GO:0009607 | GO:GO:0009628 |
| GO:GO:0009987 | GO:GO:0043565 | GO:GO:0045893 | GO:GO:0048364 | GO:GO:1900150 | GO:GO:1901002 |
| GO:GO:1902584 | InterPro:IPR003441 | InterPro:IPR036093 | EnsemblPlants:KXG33829 | ProteinID:KXG33829 | ProteinID:KXG33829.1 |
| InterPro:NAC-dom | InterPro:NAC_dom_sf | PFAM:PF02365 | PFscan:PS51005 | PANTHER:PTHR31719 | PANTHER:PTHR31719:SF43 |
| EnsemblPlantsGene:SORBI_3003G379700 | SUPFAM:SSF101941 | UniParc:UPI000220726C | : | : | : |
Description
hypothetical protein
Coordinates
chr3:-:69351545..69356140
Molecular Weight (calculated)
32274.5 Da
IEP (calculated)
8.437
GRAVY (calculated)
-0.500
Length
291 amino acids
Sequence
(BLAST)
(BLAST)
001: MSGGGQDLQL PPGFRFHPTD EELVMHYLCR RCAGLPIAVP IIAEIDLYKF DPWQLPRMAL YGEKEWYFFS PRDRKYPNGS RPNRAAGSGY WKATGADKPV
101: GTPKPLAIKK ALVFYAGKAP KGEKTNWIMH EYRLADVDRS ARKKNSLRLD DWVLCRIYNK KGGLEKPSAV AGGDHKPMFA AAAVSSPPEQ KPFVAAPGGL
201: PPFPDLAAYY DRPSDSMPRL HADSSCSEQV LSPEQLACDR EVQSQPKISE WERTFASDPV NPAGSMLDPV VGGHAGDPLL QDILMYWGKP F
101: GTPKPLAIKK ALVFYAGKAP KGEKTNWIMH EYRLADVDRS ARKKNSLRLD DWVLCRIYNK KGGLEKPSAV AGGDHKPMFA AAAVSSPPEQ KPFVAAPGGL
201: PPFPDLAAYY DRPSDSMPRL HADSSCSEQV LSPEQLACDR EVQSQPKISE WERTFASDPV NPAGSMLDPV VGGHAGDPLL QDILMYWGKP F
001: MSELLQLPPG FRFHPTDEEL VMHYLCRKCA SQSIAVPIIA EIDLYKYDPW ELPGLALYGE KEWYFFSPRD RKYPNGSRPN RSAGSGYWKA TGADKPIGLP
101: KPVGIKKALV FYAGKAPKGE KTNWIMHEYR LADVDRSVRK KKNSLRLDDW VLCRIYNKKG ATERRGPPPP VVYGDEIMEE KPKVTEMVMP PPPQQTSEFA
201: YFDTSDSVPK LHTTDSSCSE QVVSPEFTSE VQSEPKWKDW SAVSNDNNNT LDFGFNYIDA TVDNAFGGGG SSNQMFPLQD MFMYMQKPY
101: KPVGIKKALV FYAGKAPKGE KTNWIMHEYR LADVDRSVRK KKNSLRLDDW VLCRIYNKKG ATERRGPPPP VVYGDEIMEE KPKVTEMVMP PPPQQTSEFA
201: YFDTSDSVPK LHTTDSSCSE QVVSPEFTSE VQSEPKWKDW SAVSNDNNNT LDFGFNYIDA TVDNAFGGGG SSNQMFPLQD MFMYMQKPY
Arabidopsis Description
NAC002ATAF1 [Source:UniProtKB/TrEMBL;Acc:A0A178W8W1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.