Factsheet for Solyc11g017470.1.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400023917	Potato	nucleus	94.16	94.16
Solyc06g060230.2.1	Tomato	nucleus	71.82	70.61
KRH17977	Soybean	nucleus	64.26	69.78
VIT_18s0001g02300.t01	Wine grape	nucleus	70.1	68.23
KRH16387	Soybean	nucleus	65.64	68.21
KRH64668	Soybean	nucleus	69.76	67.67
KRH53247	Soybean	nucleus	68.04	66.22
GSMUA_Achr10P...	Banana	nucleus	57.39	65.49
AT1G77450.1	Thale cress	cytosol, nucleus, plastid	56.36	64.82
Bra008309.1-P	Field mustard	cytosol, nucleus, plastid	56.7	63.46
CDY40894	Canola	nucleus	56.7	63.46
CDY38346	Canola	cytosol, nucleus, plastid	56.7	63.46
GSMUA_Achr6P18720_001	Banana	nucleus	59.11	62.77
KXG33829	Sorghum	nucleus	62.2	62.2
GSMUA_Achr6P25380_001	Banana	nucleus	57.73	61.31
GSMUA_Achr7P23250_001	Banana	nucleus	56.01	60.82
Zm00001d042609_P001	Maize	cytosol, mitochondrion, nucleus	61.51	60.68
Os01t0884300-01	Rice	nucleus	62.54	60.07
TraesCS3D01G401200.1	Wheat	nucleus	61.51	59.87
TraesCS3A01G406000.1	Wheat	nucleus	61.51	59.87
TraesCS3B01G439600.1	Wheat	nucleus	61.17	59.73
Solyc04g009440.2.1	Tomato	nucleus	61.51	59.47
HORVU1Hr1G063740.1	Barley	nucleus	58.76	58.36
TraesCS1A01G263700.1	Wheat	nucleus	58.76	58.36
CDX84050	Canola	nucleus	38.14	57.51
TraesCS1D01G263800.1	Wheat	nucleus	59.11	57.33
TraesCS1B01G274300.1	Wheat	nucleus	58.76	56.81
GSMUA_Achr6P17720_001	Banana	nucleus	56.36	56.55
KXG22031	Sorghum	nucleus	58.08	49.56
Zm00001d038221_P001	Maize	plastid	57.39	49.26
GSMUA_Achr3P18990_001	Banana	plastid	55.67	48.65
Os11t0184900-02	Rice	nucleus	54.3	48.02
HORVU4Hr1G017430.7	Barley	nucleus	53.61	46.99
TraesCS4B01G098200.1	Wheat	nucleus	53.61	46.71
TraesCS4D01G094400.1	Wheat	nucleus	53.61	46.57
TraesCS4A01G219700.1	Wheat	nucleus	53.61	46.57
Zm00001d000112_P001	Maize	nucleus	52.23	42.34
OQU83033	Sorghum	nucleus	52.58	39.84
Solyc04g005610.2.1	Tomato	nucleus	37.46	39.64
Solyc05g007770.2.1	Tomato	nucleus	37.11	38.3
Solyc07g063420.2.1	Tomato	nucleus	40.55	35.87
Solyc12g013620.1.1	Tomato	nucleus	42.27	35.24
Solyc07g063410.2.1	Tomato	nucleus	41.92	34.27
Solyc10g083450.1.1	Tomato	cytosol	33.33	33.56
Solyc10g006880.2.1	Tomato	nucleus	40.55	33.24
Solyc11g065540.1.1	Tomato	nucleus	33.68	31.72
Solyc02g061780.2.1	Tomato	nucleus	26.46	31.56
Solyc02g069960.2.1	Tomato	nucleus	31.27	29.35
Solyc05g021090.2.1	Tomato	nucleus	27.49	28.67
Solyc10g055760.1.1	Tomato	cytosol	27.49	28.27
Solyc07g045030.2.1	Tomato	nucleus	29.55	25.98
Solyc02g087920.2.1	Tomato	nucleus	31.27	23.76
Solyc05g007550.1.1	Tomato	nucleus	31.27	23.33
Solyc01g102740.2.1	Tomato	nucleus	32.3	22.76
Solyc07g006840.1.1	Tomato	nucleus	33.33	20.08

Protein Annotations

MapMan:15.5.17	Gene3D:3.30.310.150	ProteinID:AGH20612.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0006950	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009611	GO:GO:0009719	GO:GO:0009788	GO:GO:0009987
InterPro:IPR003441	InterPro:IPR036093	UniProt:K4D6Q0	EMBL:KC453999	InterPro:NAC-dom	InterPro:NAC_dom_sf
PFAM:PF02365	PFscan:PS51005	PANTHER:PTHR31719	PANTHER:PTHR31719:SF16	SUPFAM:SSF101941	EnsemblPlantsGene:Solyc11g017470.1
EnsemblPlants:Solyc11g017470.1.1	UniParc:UPI000276A8F9	:	:	:	:

Description

NAC4 domain protein [Source:UniProtKB/TrEMBL;Acc:K4D6Q0]

Coordinates

chr11:-:8422146..8423170

Molecular Weight (calculated)

33465.5 Da

IEP (calculated)

7.162

GRAVY (calculated)

-0.691

Length

291 amino acids

Sequence
(BLAST)

001: MVELQFPAGF RFHPTDEELV MHYLCRKCDA QPIAVPIIAE IDLYKYNPWD LPDLALYGEK EWYFFSPRDR KYPNGSRPNR AAGSGYWKAT GADKPIGRPK
101: SMGIKKALVF YAGKAPKGEK TNWIMHEYRL AHVDRSARNK NNSLRLDDWV LCRIYNKKGT IEKNQLNIRK MNGEMSPAVS EGDVKPEIVP ISVSTNPSST
201: SYHVYNDFTY FNSPDSLTKL HADSSCSEHV PSPEFTYEKE VQSEPKPKPS EWEKTALDFP FNYTDATASE LQSCYEMSPL QDIFMYLQKP F

Best Arabidopsis Sequence Match ( AT1G01720.1 )
(BLAST)

001: MSELLQLPPG FRFHPTDEEL VMHYLCRKCA SQSIAVPIIA EIDLYKYDPW ELPGLALYGE KEWYFFSPRD RKYPNGSRPN RSAGSGYWKA TGADKPIGLP
101: KPVGIKKALV FYAGKAPKGE KTNWIMHEYR LADVDRSVRK KKNSLRLDDW VLCRIYNKKG ATERRGPPPP VVYGDEIMEE KPKVTEMVMP PPPQQTSEFA
201: YFDTSDSVPK LHTTDSSCSE QVVSPEFTSE VQSEPKWKDW SAVSNDNNNT LDFGFNYIDA TVDNAFGGGG SSNQMFPLQD MFMYMQKPY

Arabidopsis Description

NAC002ATAF1 [Source:UniProtKB/TrEMBL;Acc:A0A178W8W1]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.