Factsheet for Solyc01g102740.2.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400047021	Potato	nucleus	94.43	96.53
GSMUA_Achr10P...	Banana	nucleus	44.07	55.66
GSMUA_Achr5P17060_001	Banana	nucleus	37.77	55.32
GSMUA_Achr10P...	Banana	nucleus	44.79	54.57
GSMUA_Achr11P...	Banana	nucleus	41.65	54.09
GSMUA_Achr11P...	Banana	nucleus	42.86	52.84
KRH51263	Soybean	nucleus	50.61	52.25
GSMUA_Achr3P21690_001	Banana	nucleus	45.04	52.25
GSMUA_Achr7P23650_001	Banana	nucleus	43.83	52.01
KRH01889	Soybean	nucleus	50.36	51.61
CDY15835	Canola	nucleus	48.91	49.63
AT2G02450.2	Thale cress	nucleus	49.39	49.28
CDY09368	Canola	nucleus	48.43	49.26
Bra017416.1-P	Field mustard	nucleus	47.46	49.25
Bra026595.1-P	Field mustard	nucleus	46.97	49.24
CDY17437	Canola	nucleus	48.18	49.01
CDY03050	Canola	nucleus	48.91	48.79
CDY04129	Canola	nucleus	48.18	48.77
VIT_12s0035g02020.t01	Wine grape	nucleus	53.75	48.68
Bra024818.1-P	Field mustard	nucleus	47.94	48.65
CDY17595	Canola	nucleus	48.91	48.44
TraesCS1B01G272600.1	Wheat	nucleus	42.86	45.74
TraesCS1D01G261800.1	Wheat	nucleus	42.86	45.5
TraesCS1A01G261800.1	Wheat	nucleus	43.1	45.41
HORVU1Hr1G064300.1	Barley	nucleus	43.1	45.29
TraesCS3B01G436900.1	Wheat	nucleus	45.04	45.15
HORVU3Hr1G090440.4	Barley	cytosol, nucleus, peroxisome	44.79	45.12
TraesCS3D01G398200.1	Wheat	nucleus	44.79	45.12
TraesCS3A01G403300.1	Wheat	nucleus	44.79	44.9
Solyc02g061780.2.1	Tomato	nucleus	26.15	44.26
Zm00001d049687_P001	Maize	nucleus	39.23	44.02
HORVU7Hr1G076250.1	Barley	nucleus	40.92	43.22
TraesCS7B01G219400.1	Wheat	nucleus	40.68	43.19
TraesCS7D01G315100.1	Wheat	nucleus	40.68	43.08
TraesCS7A01G318500.1	Wheat	nucleus	40.44	43.04
EES13251	Sorghum	mitochondrion, nucleus	38.74	42.78
Zm00001d035076_P001	Maize	mitochondrion, nucleus	36.08	41.62
Zm00001d042580_P001	Maize	nucleus	45.04	41.61
Zm00001d010239_P001	Maize	nucleus	41.89	41.59
EES19541	Sorghum	nucleus	41.89	41.29
EES01882	Sorghum	nucleus	43.83	40.95
Os01t0888300-01	Rice	nucleus	44.31	40.49
Zm00001d038207_P001	Maize	nucleus	41.16	40.48
Os05t0418800-00	Rice	plastid	44.07	37.45
Solyc10g055760.1.1	Tomato	cytosol	23.49	34.28
Solyc05g021090.2.1	Tomato	nucleus	22.52	33.33
Solyc06g060230.2.1	Tomato	nucleus	23.24	32.43
Solyc11g017470.1.1	Tomato	nucleus	22.76	32.3
Solyc02g069960.2.1	Tomato	nucleus	23.73	31.61
Solyc04g005610.2.1	Tomato	nucleus	20.82	31.27
Solyc07g045030.2.1	Tomato	nucleus	24.94	31.12
Solyc04g009440.2.1	Tomato	nucleus	22.03	30.23
Solyc12g013620.1.1	Tomato	nucleus	25.18	29.8
Solyc05g007770.2.1	Tomato	nucleus	19.85	29.08
Solyc07g063410.2.1	Tomato	nucleus	24.7	28.65
Solyc07g063420.2.1	Tomato	nucleus	22.76	28.57
Solyc05g007550.1.1	Tomato	nucleus	25.18	26.67
Solyc02g087920.2.1	Tomato	nucleus	24.7	26.63
Solyc10g006880.2.1	Tomato	nucleus	22.03	25.63
Solyc11g065540.1.1	Tomato	nucleus	18.89	25.24
Solyc10g083450.1.1	Tomato	cytosol	17.43	24.91
Solyc07g006840.1.1	Tomato	nucleus	21.31	18.22

Protein Annotations

MapMan:15.5.17	Gene3D:3.30.310.150	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR003441
InterPro:IPR036093	UniProt:K4B1K2	InterPro:NAC-dom	InterPro:NAC_dom_sf	PFAM:PF02365	PFscan:PS51005
PANTHER:PTHR45123	PANTHER:PTHR45123:SF2	SUPFAM:SSF101941	EnsemblPlantsGene:Solyc01g102740.2	EnsemblPlants:Solyc01g102740.2.1	UniParc:UPI0002767E4D
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr1:+:91475908..91477961

Molecular Weight (calculated)

46930.3 Da

IEP (calculated)

6.631

GRAVY (calculated)

-0.811

Length

413 amino acids

Sequence
(BLAST)

001: MAIVPFITTN MSQSQQQHQQ QQDDDDNNNI NNTIKGDDND DDDDHEHDMV MPGFRFHPTE EELVEFYLRR KVEGKRFNVE LITFLDLYRY DPWELPALAA
101: IGEKEWYFYV PRDRKYRNGD RPNRVTTSGY WKATGADRMI RTENSRSIGL KKTLVFYSGK APKGIRSSWI MNEYRLPHHE TERLQKAEIS LCRVYKRAGV
201: EDHPSLPRSL LTTRASSSSS SRGTTPIKKQ QVAQQDSSLI SPLYLGQSSQ QQIDEKLSTE TSASSTSTDH HHHHQHHVAT SLGLNSLSNS YTNIALDPIG
301: SAVNITTSTL TPFTSLVATT NNTTDDLHRL INLDQVVAFH NNQHHFHPPP GVVPQQYPPP LLLQQPQSLL HQGSLPSSAA AAFSDRLWEW NSINQTDGSC
401: KDDHYDQGNN PFK

Best Arabidopsis Sequence Match ( AT2G02450.2 )
(BLAST)

001: MAIVSSTTSI IPMSNQVNNN EKGIEDNDHR GGQESHVQNE DEADDHDHDM VMPGFRFHPT EEELIEFYLR RKVEGKRFNV ELITFLDLYR YDPWELPAMA
101: AIGEKEWYFY VPRDRKYRNG DRPNRVTTSG YWKATGADRM IRSETSRPIG LKKTLVFYSG KAPKGTRTSW IMNEYRLPHH ETEKYQKAEI SLCRVYKRPG
201: VEDHPSVPRS LSTRHHNHNS STSSRLALRQ QQHHSSSSNH SDNNLNNNNN INNLEKLSTE YSGDGSTTTT TTNSNSDVTI ALANQNIYRP MPYDTSNNTL
301: IVSTRNHQDD DETAIVDDLQ RLVNYQISDG GNINHQYFQI AQQFHHTQQQ NANANALQLV AAATTATTLM PQTQAALAMN MIPAGTIPNN ALWDMWNPIV
401: PDGNRDHYTN IPFK

Arabidopsis Description

NAC035NAC domain-containing protein 35 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVP8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.