Factsheet for PGSC0003DMT400047021

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc01g102740.2.1	Tomato	nucleus	96.53	94.43
GSMUA_Achr10P...	Banana	nucleus	45.05	55.66
GSMUA_Achr5P17060_001	Banana	nucleus	38.61	55.32
GSMUA_Achr10P...	Banana	nucleus	45.79	54.57
GSMUA_Achr11P...	Banana	nucleus	42.82	54.4
GSMUA_Achr11P...	Banana	nucleus	43.81	52.84
GSMUA_Achr7P23650_001	Banana	nucleus	45.05	52.3
GSMUA_Achr3P21690_001	Banana	nucleus	45.79	51.97
KRH51263	Soybean	nucleus	50.99	51.5
KRH01889	Soybean	nucleus	50.99	51.12
Bra026595.1-P	Field mustard	nucleus	48.27	49.49
Bra017416.1-P	Field mustard	nucleus	48.51	49.25
Bra024818.1-P	Field mustard	nucleus	49.26	48.89
VIT_12s0035g02020.t01	Wine grape	nucleus	54.7	48.46
CDY15835	Canola	nucleus	48.76	48.4
AT2G02450.2	Thale cress	nucleus	49.51	48.31
CDY17437	Canola	nucleus	48.51	48.28
CDY03050	Canola	nucleus	49.26	48.07
CDY09368	Canola	nucleus	48.27	48.03
CDY04129	Canola	nucleus	48.27	47.79
CDY17595	Canola	nucleus	49.26	47.72
TraesCS1B01G272600.1	Wheat	nucleus	43.81	45.74
TraesCS1D01G261800.1	Wheat	nucleus	43.81	45.5
TraesCS1A01G261800.1	Wheat	nucleus	44.06	45.41
HORVU1Hr1G064300.1	Barley	nucleus	44.06	45.29
TraesCS3B01G436900.1	Wheat	nucleus	46.04	45.15
HORVU3Hr1G090440.4	Barley	cytosol, nucleus, peroxisome	45.79	45.12
TraesCS3D01G398200.1	Wheat	nucleus	45.79	45.12
TraesCS3A01G403300.1	Wheat	nucleus	45.79	44.9
PGSC0003DMT400022365	Potato	cytosol	26.73	44.08
Zm00001d049687_P001	Maize	nucleus	40.1	44.02
EES13251	Sorghum	mitochondrion, nucleus	39.6	42.78
HORVU7Hr1G076250.1	Barley	nucleus	41.34	42.71
TraesCS7B01G219400.1	Wheat	nucleus	41.09	42.67
TraesCS7D01G315100.1	Wheat	nucleus	41.09	42.56
TraesCS7A01G318500.1	Wheat	nucleus	40.84	42.53
Zm00001d042580_P001	Maize	nucleus	46.29	41.83
Zm00001d035076_P001	Maize	mitochondrion, nucleus	36.88	41.62
Zm00001d010239_P001	Maize	nucleus	42.82	41.59
EES19541	Sorghum	nucleus	42.82	41.29
EES01882	Sorghum	nucleus	45.05	41.18
Os01t0888300-01	Rice	nucleus	45.3	40.49
Zm00001d038207_P001	Maize	nucleus	42.08	40.48
Os05t0418800-00	Rice	plastid	44.31	36.83
PGSC0003DMT400090327	Potato	cytosol	24.5	34.86
PGSC0003DMT400003082	Potato	nucleus	24.01	34.4
PGSC0003DMT400028190	Potato	nucleus	24.5	34.26
PGSC0003DMT400045294	Potato	nucleus	24.26	33.11
PGSC0003DMT400023917	Potato	nucleus	23.02	31.96
PGSC0003DMT400054407	Potato	nucleus	24.5	31.53
PGSC0003DMT400007341	Potato	mitochondrion	21.78	31.1
PGSC0003DMT400047440	Potato	nucleus	21.04	30.14
PGSC0003DMT400082472	Potato	nucleus	22.28	29.7
PGSC0003DMT400039670	Potato	nucleus	25.74	29.63
PGSC0003DMT400049665	Potato	nucleus	25.5	28.93
PGSC0003DMT400049664	Potato	nucleus	23.51	28.02
PGSC0003DMT400049124	Potato	nucleus	17.08	27.6
PGSC0003DMT400080307	Potato	nucleus	26.24	27.39
PGSC0003DMT400064428	Potato	nucleus	23.27	26.78
PGSC0003DMT400003343	Potato	nucleus	26.24	26.77
PGSC0003DMT400093822	Potato	nucleus	18.81	25.59
PGSC0003DMT400048237	Potato	nucleus	21.04	17.38

Protein Annotations

MapMan:15.5.17	Gene3D:3.30.310.150	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR003441
InterPro:IPR036093	UniProt:M1BK16	InterPro:NAC-dom	InterPro:NAC_dom_sf	PFAM:PF02365	EnsemblPlantsGene:PGSC0003DMG400018262
PGSC:PGSC0003DMG400018262	EnsemblPlants:PGSC0003DMT400047021	PFscan:PS51005	PANTHER:PTHR45123	PANTHER:PTHR45123:SF2	SUPFAM:SSF101941
UniParc:UPI000294929F	SEG:seg	:	:	:	:

Description

NAC domain-containing protein [Source:PGSC_GENE;Acc:PGSC0003DMG400018262]

Coordinates

chr1:+:79423142..79425590

Molecular Weight (calculated)

46005.2 Da

IEP (calculated)

6.775

GRAVY (calculated)

-0.832

Length

404 amino acids

Sequence
(BLAST)

001: MSQSQQQHQQ QDDDDNINNT IKGDDDDDDH EHDMVMPGFR FHPTEEELVE FYLRRKVEGK RFNVELITFL DLYRYDPWEL PALAAIGEKE WYFYVPRDRK
101: YRNGDRPNRV TTSGYWKATG ADRMIRTENS RSIGLKKTLV FYSGKAPKGI RSSWIMNEYR LPHHETERLQ KAEISLCRVY KRAGVEDHPS LPRSLLTTRA
201: SSSSSSRGTT SIKKQQVQQQ DSSLISPLYL GQSSQQQIDE KLSTETSASS TSTDHHHHHH HHHVATSLGL NSLSNSYTNI ALDPIGSAVN SSLNITTSTL
301: TPFTSLVATT NNTDDLHRLI NLDQVVAFHN NQHHFHPPPG VVPQQYPPLL LQQPQLAPQS LLHQGSLPSS AAAAFSDRLW EWNSINQTDG SCKDDHYQDN
401: NPFK

Best Arabidopsis Sequence Match ( AT2G02450.2 )
(BLAST)

001: MAIVSSTTSI IPMSNQVNNN EKGIEDNDHR GGQESHVQNE DEADDHDHDM VMPGFRFHPT EEELIEFYLR RKVEGKRFNV ELITFLDLYR YDPWELPAMA
101: AIGEKEWYFY VPRDRKYRNG DRPNRVTTSG YWKATGADRM IRSETSRPIG LKKTLVFYSG KAPKGTRTSW IMNEYRLPHH ETEKYQKAEI SLCRVYKRPG
201: VEDHPSVPRS LSTRHHNHNS STSSRLALRQ QQHHSSSSNH SDNNLNNNNN INNLEKLSTE YSGDGSTTTT TTNSNSDVTI ALANQNIYRP MPYDTSNNTL
301: IVSTRNHQDD DETAIVDDLQ RLVNYQISDG GNINHQYFQI AQQFHHTQQQ NANANALQLV AAATTATTLM PQTQAALAMN MIPAGTIPNN ALWDMWNPIV
401: PDGNRDHYTN IPFK

Arabidopsis Description

NAC035NAC domain-containing protein 35 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVP8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.