Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc07g063420.2.1 | Tomato | nucleus | 94.99 | 97.87 |
| PGSC0003DMT400064428 | Potato | nucleus | 65.49 | 63.25 |
| KRH22138 | Soybean | nucleus | 66.67 | 60.27 |
| KRH27199 | Soybean | nucleus | 66.37 | 60.0 |
| PGSC0003DMT400045294 | Potato | nucleus | 38.64 | 44.26 |
| TraesCS2D01G214100.1 | Wheat | nucleus | 50.44 | 42.86 |
| HORVU2Hr1G039640.2 | Barley | nucleus | 50.74 | 42.47 |
| TraesCS2A01G201800.2 | Wheat | nucleus | 50.74 | 42.26 |
| PGSC0003DMT400023917 | Potato | nucleus | 35.99 | 41.92 |
| TraesCS2B01G228900.1 | Wheat | nucleus | 50.15 | 41.87 |
| OQU90111 | Sorghum | nucleus | 51.62 | 41.87 |
| PGSC0003DMT400047440 | Potato | nucleus | 34.81 | 41.84 |
| PGSC0003DMT400007341 | Potato | mitochondrion | 34.81 | 41.7 |
| Zm00001d021818_P002 | Maize | nucleus | 50.74 | 41.05 |
| Os07t0566500-01 | Rice | nucleus | 50.74 | 40.47 |
| TraesCS6D01G096300.1 | Wheat | nucleus | 48.97 | 40.39 |
| TraesCS6A01G108300.2 | Wheat | nucleus | 49.56 | 40.38 |
| HORVU6Hr1G019380.2 | Barley | plastid | 48.38 | 40.0 |
| PGSC0003DMT400082472 | Potato | nucleus | 33.92 | 37.95 |
| PGSC0003DMT400049665 | Potato | nucleus | 39.53 | 37.64 |
| PGSC0003DMT400039670 | Potato | nucleus | 37.46 | 36.18 |
| PGSC0003DMT400093822 | Potato | nucleus | 29.79 | 34.01 |
| PGSC0003DMT400022365 | Potato | cytosol | 24.19 | 33.47 |
| PGSC0003DMT400090327 | Potato | cytosol | 25.37 | 30.28 |
| PGSC0003DMT400054407 | Potato | nucleus | 28.02 | 30.25 |
| PGSC0003DMT400003082 | Potato | nucleus | 24.78 | 29.79 |
| PGSC0003DMT400028190 | Potato | nucleus | 23.3 | 27.34 |
| PGSC0003DMT400080307 | Potato | nucleus | 28.61 | 25.06 |
| PGSC0003DMT400003343 | Potato | nucleus | 28.91 | 24.75 |
| PGSC0003DMT400049124 | Potato | nucleus | 17.7 | 24.0 |
| PGSC0003DMT400047021 | Potato | nucleus | 28.02 | 23.51 |
| PGSC0003DMT400048237 | Potato | nucleus | 30.97 | 21.47 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR003441 |
| InterPro:IPR036093 | UniProt:M1BP48 | InterPro:NAC-dom | InterPro:NAC_dom_sf | PFAM:PF02365 | EnsemblPlantsGene:PGSC0003DMG400019293 |
| PGSC:PGSC0003DMG400019293 | EnsemblPlants:PGSC0003DMT400049664 | PFscan:PS51005 | PANTHER:PTHR45430 | PANTHER:PTHR45430:SF1 | SUPFAM:SSF101941 |
| UniParc:UPI0002959A38 | SEG:seg | : | : | : | : |
Description
NAC domain-containing protein [Source:PGSC_GENE;Acc:PGSC0003DMG400019293]
Coordinates
chr7:+:53586585..53589705
Molecular Weight (calculated)
38141.8 Da
IEP (calculated)
8.884
GRAVY (calculated)
-0.777
Length
339 amino acids
Sequence
(BLAST)
(BLAST)
001: MESTDSSTGS HHQPQLPPGF RFHPTDEELV VHYLKKRVAS VPLPVSIIAE VDLYKFDPWE LPAKATFGEQ EWYFFSPRDR KYPNGARPNR AATSGYWKAT
101: GTDKPVLTAG GTQKVGVKKA LVFYGGKPPK GVKTNWIMHE YRLADNKTNN KPPGCDLANK KSLRLDDWVL CRIYKKNNTQ RPIDHERDDL NIDMMMGSSS
201: INPSYIPNSM SMPNIFGQPK IPQLKSSNFG TTLLHDQNHD QNLFEGGSQF SSKRPLANLY WNDQDGGASN DNSQSTKRFL TENMEDGLNM NARADEHNGS
301: IVSLLSQLPQ TSSLHQQQVL GSLSDGVFRQ PYSGMNWYS
101: GTDKPVLTAG GTQKVGVKKA LVFYGGKPPK GVKTNWIMHE YRLADNKTNN KPPGCDLANK KSLRLDDWVL CRIYKKNNTQ RPIDHERDDL NIDMMMGSSS
201: INPSYIPNSM SMPNIFGQPK IPQLKSSNFG TTLLHDQNHD QNLFEGGSQF SSKRPLANLY WNDQDGGASN DNSQSTKRFL TENMEDGLNM NARADEHNGS
301: IVSLLSQLPQ TSSLHQQQVL GSLSDGVFRQ PYSGMNWYS
001: MESTDSSGGP PPPQPNLPPG FRFHPTDEEL VVHYLKRKAA SAPLPVAIIA EVDLYKFDPW ELPAKASFGE QEWYFFSPRD RKYPNGARPN RAATSGYWKA
101: TGTDKPVLAS DGNQKVGVKK ALVFYSGKPP KGVKSDWIMH EYRLIENKPN NRPPGCDFGN KKNSLRLDDW VLCRIYKKNN ASRHVDNDKD HDMIDYIFRK
201: IPPSLSMAAA STGLHQHHHN VSRSMNFFPG KFSGGGYGIF SDGGNTSIYD GGGMINNIGT DSVDHDNNAD VVGLNHASSS GPMMMANLKR TLPVPYWPVA
301: DEEQDASPSK RFHGVGGGGG DCSNMSSSMM EETPPLMQQQ GGVLGDGLFR TTSYQLPGLN WYSS
101: TGTDKPVLAS DGNQKVGVKK ALVFYSGKPP KGVKSDWIMH EYRLIENKPN NRPPGCDFGN KKNSLRLDDW VLCRIYKKNN ASRHVDNDKD HDMIDYIFRK
201: IPPSLSMAAA STGLHQHHHN VSRSMNFFPG KFSGGGYGIF SDGGNTSIYD GGGMINNIGT DSVDHDNNAD VVGLNHASSS GPMMMANLKR TLPVPYWPVA
301: DEEQDASPSK RFHGVGGGGG DCSNMSSSMM EETPPLMQQQ GGVLGDGLFR TTSYQLPGLN WYSS
Arabidopsis Description
NAC056NAC transcription factor 56 [Source:UniProtKB/Swiss-Prot;Acc:Q9LD44]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.