Factsheet for PGSC0003DMT400028190

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc10g055760.1.1	Tomato	cytosol	89.97	91.87
VIT_03s0038g03410.t01	Wine grape	nucleus	60.55	62.72
CDY02222	Canola	nucleus	55.36	56.94
KRH24118	Soybean	cytosol	58.48	56.9
AT2G17040.1	Thale cress	nucleus	54.33	56.88
Bra013034.1-P	Field mustard	nucleus	55.02	56.58
CDY39487	Canola	nucleus	55.02	56.58
Bra037283.1-P	Field mustard	nucleus	53.98	55.91
CDY26794	Canola	nucleus	53.98	55.91
KRH29090	Soybean	nucleus	58.13	55.63
CDY47486	Canola	nucleus	53.63	55.56
CDY47485	Canola	nucleus	53.63	55.56
GSMUA_Achr1P02710_001	Banana	nucleus	51.21	54.41
GSMUA_Achr11P...	Banana	nucleus	49.13	54.2
GSMUA_AchrUn_...	Banana	nucleus	47.4	52.49
CDX71329	Canola	endoplasmic reticulum, extracellular	52.6	49.51
GSMUA_Achr7P04030_001	Banana	nucleus	48.44	49.12
GSMUA_Achr5P19060_001	Banana	nucleus	41.18	48.77
PGSC0003DMT400022365	Potato	cytosol	41.18	48.57
Os03t0133000-01	Rice	nucleus	52.25	47.78
Bra002018.1-P	Field mustard	cytosol	52.25	47.34
CDY31385	Canola	cytosol	51.9	47.02
Zm00001d014843_P001	Maize	nucleus	43.25	46.64
GSMUA_Achr3P14720_001	Banana	nucleus	46.37	46.37
Os06t0726300-01	Rice	nucleus	45.67	45.21
Zm00001d027530_P001	Maize	nucleus	50.52	44.92
Zm00001d048347_P001	Maize	nucleus	49.13	44.8
TraesCS7D01G535300.1	Wheat	cytosol, nucleus, plastid	46.02	44.63
GSMUA_Achr3P00560_001	Banana	nucleus	42.91	44.44
TraesCS7A01G549000.1	Wheat	cytosol, nucleus, plastid	45.67	44.44
EER92917	Sorghum	nucleus	50.17	44.34
TraesCS5A01G500500.1	Wheat	nucleus	50.52	43.2
TraesCS7B01G472200.1	Wheat	cytosol, nucleus, plastid	44.29	43.1
TraesCS7B01G472600.1	Wheat	cytosol, nucleus, plastid	44.64	43.0
TraesCS5A01G500400.1	Wheat	nucleus	51.21	42.53
TraesCS4D01G325700.1	Wheat	nucleus	50.87	42.36
TraesCS4B01G328800.1	Wheat	nucleus	50.52	42.07
TraesCS4B01G328600.1	Wheat	nucleus	50.17	41.31
TraesCS4D01G325800.1	Wheat	nucleus	50.52	41.24
TraesCS4B01G329100.1	Wheat	nucleus	49.83	40.91
TraesCS4B01G328900.1	Wheat	nucleus	49.48	40.62
HORVU4Hr1G081450.1	Barley	nucleus	49.83	40.45
TraesCS4B01G328700.1	Wheat	nucleus	49.13	40.23
Zm00001d036364_P001	Maize	nucleus	45.33	40.18
TraesCS5A01G500700.1	Wheat	nucleus	49.48	40.17
HORVU4Hr1G081430.1	Barley	cytosol, nucleus	50.52	39.46
TraesCS5A01G500600.1	Wheat	nucleus	49.48	38.75
HORVU4Hr1G081440.3	Barley	nucleus	49.48	37.63
GSMUA_Achr1P18110_001	Banana	cytosol, nucleus, plastid	27.68	36.87
KXG20943	Sorghum	nucleus, plastid	47.06	35.23
PGSC0003DMT400007341	Potato	mitochondrion	29.07	29.68
PGSC0003DMT400090327	Potato	cytosol	28.03	28.52
PGSC0003DMT400003082	Potato	nucleus	27.68	28.37
PGSC0003DMT400023917	Potato	nucleus	28.37	28.18
PGSC0003DMT400045294	Potato	nucleus	28.72	28.04
PGSC0003DMT400047440	Potato	nucleus	26.99	27.66
PGSC0003DMT400082472	Potato	nucleus	27.68	26.4
PGSC0003DMT400054407	Potato	nucleus	28.03	25.8
PGSC0003DMT400093822	Potato	nucleus	25.95	25.25
PGSC0003DMT400080307	Potato	nucleus	33.22	24.81
PGSC0003DMT400047021	Potato	nucleus	34.26	24.5
PGSC0003DMT400039670	Potato	nucleus	29.41	24.22
PGSC0003DMT400049665	Potato	nucleus	29.76	24.16
PGSC0003DMT400003343	Potato	nucleus	32.53	23.74
PGSC0003DMT400064428	Potato	nucleus	28.72	23.65
PGSC0003DMT400049124	Potato	nucleus	20.42	23.6
PGSC0003DMT400049664	Potato	nucleus	27.34	23.3
PGSC0003DMT400048237	Potato	nucleus	24.57	14.52

Protein Annotations

EntrezGene:102585105	MapMan:15.5.17	Gene3D:3.30.310.150	GO:GO:0000003	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009653	GO:GO:0009719	GO:GO:0009791	GO:GO:0009965	GO:GO:0009987
GO:GO:0010200	GO:GO:0016043	GO:GO:0045792	GO:GO:0048281	InterPro:IPR003441	InterPro:IPR036093
UniProt:M1AQT6	InterPro:NAC-dom	InterPro:NAC_dom_sf	PFAM:PF02365	EnsemblPlantsGene:PGSC0003DMG400010870	PGSC:PGSC0003DMG400010870
EnsemblPlants:PGSC0003DMT400028190	PFscan:PS51005	PANTHER:PTHR31989	PANTHER:PTHR31989:SF2	SUPFAM:SSF101941	UniParc:UPI0002960D8C
RefSeq:XP_006360888.1	:	:	:	:	:

Description

NAC domain protein [Source:PGSC_GENE;Acc:PGSC0003DMG400010870]

Coordinates

chr10:+:47871974..47874060

Molecular Weight (calculated)

33273.5 Da

IEP (calculated)

6.721

GRAVY (calculated)

-0.619

Length

289 amino acids

Sequence
(BLAST)

001: MEDLPGFRFH PTEEELLEFY LKNKVLGKKS RCDVIGLLNI YRHDPWDLPE LATIGEREWY FFVPRDRKHG SGGRPNRTTQ KGFWKATGSD KKIIGLSNPK
101: NIIGLKKTLV FYTGRAPRGS KTDWVMNEFR LPDTVSSPQD IVLCKIYRKA TSLKVLEQRA AIEEEMNGTK HVHSSPCSTT LQPMDAMSFS NEHHEPTDQS
201: PNFFMSINKD EVEDDILSIT ENNPFEVSAE TKEKSNCFRP KLLNGQDNLA ELQVPKFSMD FSQDPVWMQL RSPWLDNFIL TPSAFVHNF

Best Arabidopsis Sequence Match ( AT2G17040.1 )
(BLAST)

001: MGKDIELPGF RFHPTEEELL DFYLKNMVYG KRSSVEVIGF LNIYRHDPWD LPGLSRIGER EWYFFVPRER KHGNGGRPSR TTEKGYWKAT GSDRKIISLS
101: EPKRVIGLKK TLVFYRGRAP GGSKTDWVMN EFRMPDNCSL PKDVVLCKIY RKATSLKVLE QRAEMEAKMN QTCPNSPLSS SETISFVGKE ENMMTSFRAP
201: QVIAMEEANK IQMHQENAKT EEKQREAETK EPSSSLKLPF GSLPELQLPK PGVEWDQLLS ISPWLQNLTP IVNIYW

Arabidopsis Description

anac036NAC domain containing protein 36 [Source:UniProtKB/TrEMBL;Acc:F4IME8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.