Skip to main content
crop-pal logo
Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • plastid 2
  • nucleus 2
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
HORVU4Hr1G081430.1 Barley cytosol, nucleus 86.84 89.19
TraesCS5A01G500700.1 Wheat nucleus 82.63 88.2
TraesCS4B01G329100.1 Wheat nucleus 81.05 87.5
TraesCS5A01G500600.1 Wheat nucleus 80.79 83.2
HORVU4Hr1G081450.1 Barley nucleus 75.79 80.9
Os03t0133000-01 Rice nucleus 60.53 72.78
Zm00001d027530_P001 Maize nucleus 58.68 68.62
Zm00001d048347_P001 Maize nucleus 57.11 68.45
EER92917 Sorghum nucleus 58.42 67.89
GSMUA_Achr11P... Banana nucleus 45.53 66.03
GSMUA_Achr1P02710_001 Banana nucleus 45.0 62.87
GSMUA_Achr5P19060_001 Banana nucleus 38.95 60.66
GSMUA_AchrUn_... Banana nucleus 41.05 59.77
VIT_03s0038g03410.t01 Wine grape nucleus 41.05 55.91
VIT_04s0008g00150.t01 Wine grape nucleus 39.47 53.76
KRH29090 Soybean nucleus 42.11 52.98
Solyc02g061780.2.1 Tomato nucleus 33.95 52.87
KRH24118 Soybean cytosol 41.32 52.86
CDY47485 Canola nucleus 38.42 52.33
Bra037283.1-P Field mustard nucleus 38.42 52.33
CDY26794 Canola nucleus 38.42 52.33
CDY47486 Canola nucleus 38.42 52.33
AT2G17040.1 Thale cress nucleus 37.89 52.17
PGSC0003DMT400022365 Potato cytosol 33.42 51.84
CDY39487 Canola nucleus 37.63 50.89
Bra013034.1-P Field mustard nucleus 37.63 50.89
CDY02222 Canola nucleus 37.37 50.53
PGSC0003DMT400028190 Potato nucleus 37.63 49.48
Solyc10g055760.1.1 Tomato cytosol 36.84 49.47
CDX71329 Canola endoplasmic reticulum, extracellular 38.68 47.88
CDY31385 Canola cytosol 38.42 45.77
Bra002018.1-P Field mustard cytosol 37.89 45.14
HORVU3Hr1G094170.1 Barley nucleus 15.0 44.88
HORVU3Hr1G032680.1 Barley nucleus 21.32 39.32
HORVU1Hr1G021800.3 Barley cytosol, nucleus 18.68 38.59
HORVU4Hr1G089660.1 Barley cytosol, nucleus 21.05 35.24
HORVU6Hr1G075830.1 Barley nucleus 23.16 33.72
HORVU5Hr1G099390.2 Barley nucleus 22.63 29.76
HORVU1Hr1G063740.1 Barley nucleus 22.89 29.69
HORVU5Hr1G099470.2 Barley cytosol 25.0 28.19
HORVU2Hr1G004130.1 Barley cytosol, nucleus 20.53 27.86
HORVU5Hr1G099460.1 Barley nucleus 24.47 26.88
HORVU5Hr1G111590.2 Barley nucleus 23.16 26.67
HORVU7Hr1G076250.1 Barley nucleus 26.84 26.09
HORVU2Hr1G011390.1 Barley nucleus 24.74 25.97
HORVU2Hr1G011360.1 Barley nucleus 24.74 25.97
HORVU1Hr1G064300.1 Barley nucleus 26.84 25.95
HORVU3Hr1G090440.4 Barley cytosol, nucleus, peroxisome 27.89 25.85
HORVU2Hr1G011370.1 Barley nucleus 25.79 25.32
HORVU4Hr1G017430.7 Barley nucleus 21.32 24.4
HORVU3Hr1G014140.3 Barley nucleus 21.58 23.5
HORVU4Hr1G051290.1 Barley nucleus 21.58 23.1
HORVU2Hr1G017470.1 Barley nucleus 21.84 21.56
HORVU5Hr1G045650.7 Barley plastid 23.16 21.52
HORVU2Hr1G039640.2 Barley nucleus 22.37 20.99
HORVU6Hr1G019380.2 Barley plastid 22.63 20.98
HORVU0Hr1G026330.2 Barley nucleus 18.42 16.83
HORVU2Hr1G017460.4 Barley nucleus 18.42 16.67
Protein Annotations
MapMan:15.5.17Gene3D:3.30.310.150UniProt:A0A287PUJ2GO:GO:0003674GO:GO:0003676GO:GO:0003677
GO:GO:0005488GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005634GO:GO:0006139
GO:GO:0006351GO:GO:0006355GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009987
EnsemblPlantsGene:HORVU4Hr1G081440EnsemblPlants:HORVU4Hr1G081440.3InterPro:IPR003441InterPro:IPR036093InterPro:NAC-domInterPro:NAC_dom_sf
PFAM:PF02365PFscan:PS51005PANTHER:PTHR31989PANTHER:PTHR31989:SF2SUPFAM:SSF101941UniParc:UPI000B4658D5
SEG:seg:::::
Description
No Description!
Coordinates
chrchr4H:+:619341860..619343403
Molecular Weight (calculated)
41513.8 Da
IEP (calculated)
6.910
GRAVY (calculated)
-0.496
Length
380 amino acids
Sequence
(BLAST)
001: HHPASSQCSS NTSTATSGVV EHLEQQQAMA MAAVASSTME IDQDLPGFRF HPTEEELLGF YLSRVALGKK LHFDIIGTLN IYRHDPWDLP GLAKIGEREW
101: YFFVPRDRKG GSGGRPNRTT ERGFWKATGS DRAIRSTADP KRVIGLKKTL VFYEGRAPRG TKTDWVMNEY RLPYSGPAPP QEDTVLCKVY RKATPLKELE
201: QRAFAMEEMK QRSGGNGGYG YSGAARACPA PAPGASDFYL SSSDDVEDNF LIPSSSSSSV APPANSSSHD EPREAKMEAD MATVSVASTS SLPLAANAPF
301: HLQLPTVNPP CGLQVPAANH GMSNMQLPAA RQGALDLPSL QLPAASSHGV FDWLNDPFLT QLRSPWQDQH SMSPYSRLLY
Best Arabidopsis Sequence Match ( AT1G26870.1 )
(BLAST)
001: MGDRNNDGDQ KMEDVLLPGF RFHPTDEELV SFYLKRKVQH NPLSIELIRQ LDIYKYDPWD LPKFAMTGEK EWYFYCPRDR KYRNSSRPNR VTGAGFWKAT
101: GTDRPIYSSE GNKCIGLKKS LVFYKGRAAK GVKTDWMMHE FRLPSLSEPS PPSKRFFDSP VSPNDSWAIC RIFKKTNTTT LRALSHSFVS SLPPETSTDT
201: MSNQKQSNTY HFSSDKILKP SSHFQFHHEN MNTPKTSNST TPSVPTISPF SYLDFTSYDK PTNVFNPVSC LDQQYLTNLF LATQETQPQF PRLPSSNEIP
301: SFLLNTSSDS TFLGEFTSHI DLSAVLAQEQ CPPLVSLPQE YQETGFEGNG IMKNMRGSNE DHLGDHCDTL RFDDFTSTIN ENHRHHQDLK QNMTLLESYY
401: SSLSSINSDL PACFSSTT
Arabidopsis Description
FEZProtein FEZ [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVH0]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.