Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU5Hr1G099460.1 | Barley | nucleus | 85.46 | 83.24 |
| TraesCS5D01G420800.1 | Wheat | nucleus | 86.35 | 79.95 |
| TraesCS5A01G411700.1 | Wheat | nucleus | 86.94 | 77.72 |
| TraesCS5B01G415400.1 | Wheat | nucleus | 86.05 | 76.92 |
| Os03t0777000-01 | Rice | nucleus | 68.84 | 64.09 |
| HORVU5Hr1G099390.2 | Barley | nucleus | 54.9 | 64.01 |
| Zm00001d007850_P001 | Maize | nucleus | 43.62 | 58.57 |
| EER95852 | Sorghum | nucleus | 58.16 | 57.14 |
| Zm00001d018773_P001 | Maize | nucleus | 56.97 | 53.63 |
| VIT_19s0027g00880.t01 | Wine grape | nucleus | 33.23 | 52.34 |
| GSMUA_Achr7P00860_001 | Banana | nucleus | 40.36 | 51.91 |
| VIT_12s0028g00860.t01 | Wine grape | nucleus | 45.7 | 51.68 |
| VIT_19s0027g00870.t01 | Wine grape | nucleus | 42.43 | 51.62 |
| GSMUA_Achr5P02170_001 | Banana | nucleus | 46.59 | 51.14 |
| VIT_19s0027g00860.t01 | Wine grape | nucleus | 40.95 | 50.0 |
| GSMUA_Achr4P23030_001 | Banana | nucleus | 36.5 | 49.2 |
| VIT_19s0027g00840.t01 | Wine grape | nucleus | 40.95 | 48.59 |
| KRH73618 | Soybean | cytosol | 45.1 | 47.5 |
| AT2G43000.1 | Thale cress | nucleus | 38.28 | 46.91 |
| PGSC0003DMT400090327 | Potato | cytosol | 39.47 | 46.83 |
| VIT_19s0027g00910.t01 | Wine grape | cytoskeleton, cytosol, nucleus | 40.95 | 46.78 |
| Bra000282.1-P | Field mustard | nucleus | 37.69 | 46.69 |
| KRH14512 | Soybean | nucleus | 45.1 | 46.63 |
| CDY30373 | Canola | nucleus | 37.69 | 45.85 |
| Bra037743.1-P | Field mustard | nucleus | 37.69 | 45.85 |
| PGSC0003DMT400054407 | Potato | nucleus | 42.43 | 45.54 |
| CDY53654 | Canola | nucleus | 37.69 | 45.52 |
| Solyc05g021090.2.1 | Tomato | nucleus | 37.69 | 45.52 |
| Solyc02g069960.2.1 | Tomato | nucleus | 41.84 | 45.48 |
| KRH46012 | Soybean | nucleus | 40.95 | 45.39 |
| Bra004736.1-P | Field mustard | nucleus | 37.69 | 45.36 |
| CDY55499 | Canola | nucleus | 37.39 | 45.16 |
| KRG98971 | Soybean | nucleus | 40.65 | 45.07 |
| CDY14865 | Canola | nucleus | 36.8 | 44.77 |
| PGSC0003DMT400003082 | Potato | nucleus | 37.39 | 44.68 |
| CDY64562 | Canola | nucleus | 38.87 | 44.56 |
| AT3G12910.1 | Thale cress | nucleus | 40.06 | 44.55 |
| CDY43391 | Canola | nucleus | 38.87 | 44.41 |
| CDX82569 | Canola | nucleus | 39.76 | 44.37 |
| KRH13702 | Soybean | nucleus | 41.54 | 44.03 |
| Bra039353.1-P | Field mustard | nucleus | 40.06 | 43.97 |
| CDY24238 | Canola | nucleus | 40.06 | 43.97 |
| HORVU6Hr1G075830.1 | Barley | nucleus | 33.83 | 43.68 |
| HORVU3Hr1G094170.1 | Barley | nucleus | 16.32 | 43.31 |
| CDY60122 | Canola | nucleus | 41.84 | 43.12 |
| Solyc07g045030.2.1 | Tomato | nucleus | 42.14 | 42.9 |
| Bra034719.1-P | Field mustard | nucleus | 41.54 | 42.81 |
| PGSC0003DMT400049124 | Potato | nucleus | 30.86 | 41.6 |
| HORVU1Hr1G021800.3 | Barley | cytosol, nucleus | 22.26 | 40.76 |
| HORVU3Hr1G032680.1 | Barley | nucleus | 22.85 | 37.38 |
| CDY23551 | Canola | nucleus | 41.25 | 37.07 |
| HORVU4Hr1G089660.1 | Barley | cytosol, nucleus | 22.85 | 33.92 |
| HORVU2Hr1G011390.1 | Barley | nucleus | 32.64 | 30.39 |
| HORVU2Hr1G011360.1 | Barley | nucleus | 32.64 | 30.39 |
| HORVU2Hr1G011370.1 | Barley | nucleus | 33.83 | 29.46 |
| HORVU2Hr1G004130.1 | Barley | cytosol, nucleus | 24.33 | 29.29 |
| HORVU1Hr1G063740.1 | Barley | nucleus | 24.93 | 28.67 |
| HORVU5Hr1G111590.2 | Barley | nucleus | 25.52 | 26.06 |
| HORVU4Hr1G051290.1 | Barley | nucleus | 27.3 | 25.92 |
| HORVU4Hr1G017430.7 | Barley | nucleus | 24.93 | 25.3 |
| HORVU4Hr1G081440.3 | Barley | nucleus | 28.19 | 25.0 |
| CDY42810 | Canola | nucleus | 37.69 | 24.9 |
| HORVU4Hr1G081450.1 | Barley | nucleus | 26.11 | 24.72 |
| CDX83510 | Canola | nucleus | 37.39 | 24.71 |
| HORVU3Hr1G014140.3 | Barley | nucleus | 25.52 | 24.64 |
| HORVU4Hr1G081430.1 | Barley | cytosol, nucleus | 27.0 | 24.59 |
| HORVU1Hr1G064300.1 | Barley | nucleus | 28.19 | 24.17 |
| HORVU7Hr1G076250.1 | Barley | nucleus | 27.6 | 23.79 |
| HORVU3Hr1G090440.4 | Barley | cytosol, nucleus, peroxisome | 27.6 | 22.68 |
| HORVU6Hr1G019380.2 | Barley | plastid | 27.0 | 22.2 |
| HORVU2Hr1G017470.1 | Barley | nucleus | 24.93 | 21.82 |
| HORVU2Hr1G039640.2 | Barley | nucleus | 26.11 | 21.73 |
| HORVU5Hr1G045650.7 | Barley | plastid | 24.93 | 20.54 |
| HORVU0Hr1G026330.2 | Barley | nucleus | 23.15 | 18.75 |
| HORVU2Hr1G017460.4 | Barley | nucleus | 23.15 | 18.57 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:HORVU5Hr1G099470 |
| EnsemblPlants:HORVU5Hr1G099470.2 | InterPro:IPR003441 | InterPro:IPR036093 | UniProt:M0Y729 | InterPro:NAC-dom | InterPro:NAC_dom_sf |
| PFAM:PF02365 | PFscan:PS51005 | PANTHER:PTHR44543 | PANTHER:PTHR44543:SF3 | SUPFAM:SSF101941 | UniParc:UPI0002960846 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chrchr5H:-:610287150..610289276
Molecular Weight (calculated)
37693.1 Da
IEP (calculated)
5.721
GRAVY (calculated)
-0.572
Length
337 amino acids
Sequence
(BLAST)
(BLAST)
001: MVAKADMTVM EMEKATSDGE VVLGGAGDDD DEEEDVVLPG YRFHPTDEEL VTFYLRRKVA RKSLRIEVIR EIDIYKHDPW DLPKASTVGG EKEWYFFCLR
101: GRKYRNSIRP NRVTGSGFWK ATGIDRPIYS AAAGRASGVS IGLKKSLVYY RGSAGKGTKT DWMMHEFRLP PAAAAAATNS SPSMQEAEVW TICRIFRRTI
201: TYRKQQQQPW RPAPAVSAAD SSSNTGSFES SEVSDEYINC LQAPAAAAPC IPEQHQYVSQ TGTVDSGNYF YMDTMHNQQQ VQGQWNAPPA APVPEHKPQS
301: QLSAANDFYK VEGYLEEIAR MMEVTDPAGF YDCRSYA
101: GRKYRNSIRP NRVTGSGFWK ATGIDRPIYS AAAGRASGVS IGLKKSLVYY RGSAGKGTKT DWMMHEFRLP PAAAAAATNS SPSMQEAEVW TICRIFRRTI
201: TYRKQQQQPW RPAPAVSAAD SSSNTGSFES SEVSDEYINC LQAPAAAAPC IPEQHQYVSQ TGTVDSGNYF YMDTMHNQQQ VQGQWNAPPA APVPEHKPQS
301: QLSAANDFYK VEGYLEEIAR MMEVTDPAGF YDCRSYA
001: MSGEGNLGKD HEEENEAPLP GFRFHPTDEE LLGYYLRRKV ENKTIKLELI KQIDIYKYDP WDLPRVSSVG EKEWYFFCMR GRKYRNSVRP NRVTGSGFWK
101: ATGIDKPVYS NLDCVGLKKS LVYYLGSAGK GTKTDWMMHE FRLPSTTKTD SPAQQAEVWT LCRIFKRVTS QRNPTILPPN RKPVITLTDT CSKTSSLDSD
201: HTSHRTVDSM SHEPPLPQPQ NPYWNQHIVG FNQPTYTGND NNLLMSFWNG NGGDFIGDSA SWDELRSVID GNTKP
101: ATGIDKPVYS NLDCVGLKKS LVYYLGSAGK GTKTDWMMHE FRLPSTTKTD SPAQQAEVWT LCRIFKRVTS QRNPTILPPN RKPVITLTDT CSKTSSLDSD
201: HTSHRTVDSM SHEPPLPQPQ NPYWNQHIVG FNQPTYTGND NNLLMSFWNG NGGDFIGDSA SWDELRSVID GNTKP
Arabidopsis Description
JUB1Transcription factor JUNGBRUNNEN 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SK55]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.