Factsheet for Solyc07g045030.2.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400049124	Potato	nucleus	71.0	94.0
Solyc05g021090.2.1	Tomato	nucleus	51.96	61.65
AT2G43000.1	Thale cress	nucleus	43.81	52.73
Bra000282.1-P	Field mustard	nucleus	43.2	52.57
GSMUA_Achr10P...	Banana	cytosol	41.39	51.31
KRH73618	Soybean	cytosol	48.04	49.69
Bra004736.1-P	Field mustard	nucleus	41.99	49.64
CDY55499	Canola	nucleus	41.69	49.46
CDY53654	Canola	nucleus	41.39	49.1
GSMUA_Achr7P00860_001	Banana	nucleus	38.67	48.85
KRH14512	Soybean	nucleus	48.04	48.77
CDY30373	Canola	nucleus	40.79	48.74
Bra037743.1-P	Field mustard	nucleus	40.79	48.74
Solyc02g069960.2.1	Tomato	nucleus	45.32	48.39
CDY14865	Canola	nucleus	40.18	48.01
GSMUA_Achr4P23030_001	Banana	nucleus	36.25	48.0
GSMUA_Achr4P32010_001	Banana	nucleus	40.79	47.04
Zm00001d007850_P001	Maize	nucleus	35.65	47.01
GSMUA_Achr9P10040_001	Banana	nucleus	42.6	46.38
GSMUA_Achr5P02170_001	Banana	nucleus	41.39	44.63
HORVU5Hr1G099470.2	Barley	cytosol	42.9	42.14
Zm00001d031164_P001	Maize	nucleus	38.67	41.83
EES17466	Sorghum	nucleus	38.37	41.78
Zm00001d013151_P001	Maize	cytosol	41.99	41.37
TraesCS5A01G411900.1	Wheat	nucleus	42.3	40.82
TraesCS5D01G421100.1	Wheat	nucleus	41.99	40.76
HORVU5Hr1G099460.1	Barley	nucleus	41.99	40.17
TraesCS5B01G415600.1	Wheat	nucleus	42.6	40.17
TraesCS5B01G415700.1	Wheat	nucleus	42.3	40.0
TraesCS5A01G411800.1	Wheat	nucleus	42.3	39.77
EER95852	Sorghum	nucleus	40.79	39.36
TraesCS4B01G384700.1	Wheat	cytoskeleton, cytosol, nucleus	39.88	38.82
TraesCS5D01G420800.1	Wheat	nucleus	42.6	38.74
EER93360	Sorghum	nucleus	43.2	38.65
HORVU5Hr1G099390.2	Barley	nucleus	33.53	38.41
Os03t0777000-01	Rice	nucleus	41.99	38.4
Zm00001d034277_P001	Maize	cytosol, mitochondrion, nucleus	42.6	38.32
TraesCS5A01G411700.1	Wheat	nucleus	43.5	38.2
Zm00001d018773_P001	Maize	nucleus	41.09	37.99
TraesCS5B01G415400.1	Wheat	nucleus	42.3	37.14
TraesCS5D01G421000.1	Wheat	nucleus	42.9	36.98
Solyc02g061780.2.1	Tomato	nucleus	24.17	32.79
Solyc04g005610.2.1	Tomato	nucleus	25.68	30.91
Solyc02g087920.2.1	Tomato	nucleus	35.65	30.81
Solyc06g060230.2.1	Tomato	nucleus	27.19	30.41
Solyc10g055760.1.1	Tomato	cytosol	25.98	30.39
Solyc04g009440.2.1	Tomato	nucleus	26.89	29.57
Solyc11g017470.1.1	Tomato	nucleus	25.98	29.55
Solyc05g007770.2.1	Tomato	nucleus	25.08	29.43
Solyc05g007550.1.1	Tomato	nucleus	33.84	28.72
Solyc07g063420.2.1	Tomato	nucleus	27.79	27.96
CDX83510	Canola	nucleus	42.9	27.84
CDY42810	Canola	nucleus	42.6	27.65
Solyc12g013620.1.1	Tomato	nucleus	27.49	26.07
Solyc10g083450.1.1	Tomato	cytosol	22.36	25.61
Solyc07g063410.2.1	Tomato	nucleus	26.89	25.0
Solyc01g102740.2.1	Tomato	nucleus	31.12	24.94
Solyc11g065540.1.1	Tomato	nucleus	23.26	24.92
Solyc10g006880.2.1	Tomato	nucleus	26.59	24.79
Solyc07g006840.1.1	Tomato	nucleus	25.98	17.81

Protein Annotations

MapMan:15.5.17	Gene3D:3.30.310.150	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005975	GO:GO:0005992
GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0006561	GO:GO:0006950	GO:GO:0007275
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009628	GO:GO:0009718	GO:GO:0009987
GO:GO:0010120	GO:GO:0010150	GO:GO:0019748	GO:GO:0042538	GO:GO:1900056	InterPro:IPR003441
InterPro:IPR036093	UniProt:K4CER1	InterPro:NAC-dom	InterPro:NAC_dom_sf	PFAM:PF02365	PFscan:PS51005
PANTHER:PTHR44543	PANTHER:PTHR44543:SF2	SUPFAM:SSF101941	EnsemblPlantsGene:Solyc07g045030.2	EnsemblPlants:Solyc07g045030.2.1	UniParc:UPI000276C7FF
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr7:+:58112720..58117533

Molecular Weight (calculated)

38449.5 Da

IEP (calculated)

9.351

GRAVY (calculated)

-0.763

Length

331 amino acids

Sequence
(BLAST)

001: MSEKRVEKME NTIVCESKIK NSDDDEENDL LLPGFRFHPT DEELVGFYLK RKVENKRIKL DLIKEVDIYK HDPWDLPKVM GRVGDNKEWY FFSMRGRKYK
101: NSVRPNRVTG SGFWKATGID KPVHSQSNEL CIGLKKSLVY YRGSAGKGTK TDWMMHEFRL PPIWKTNTSN GQHLPNLKNI AAEAEVWTLC RIFKRISNYK
201: RFTPDWKQQQ PVVKQSFVDT SSKACSVQSE ISDDQSNNVI NFKKMAFPQK SIMNASCGGN LNYQVDQRNS YYNNSQLITT MPDQSPFTSS NSIFWNTRAE
301: DQEYLFSHGN WDELKSVVDL AIDPRSLFGF K

Best Arabidopsis Sequence Match ( AT2G43000.1 )
(BLAST)

001: MSGEGNLGKD HEEENEAPLP GFRFHPTDEE LLGYYLRRKV ENKTIKLELI KQIDIYKYDP WDLPRVSSVG EKEWYFFCMR GRKYRNSVRP NRVTGSGFWK
101: ATGIDKPVYS NLDCVGLKKS LVYYLGSAGK GTKTDWMMHE FRLPSTTKTD SPAQQAEVWT LCRIFKRVTS QRNPTILPPN RKPVITLTDT CSKTSSLDSD
201: HTSHRTVDSM SHEPPLPQPQ NPYWNQHIVG FNQPTYTGND NNLLMSFWNG NGGDFIGDSA SWDELRSVID GNTKP

Arabidopsis Description

JUB1Transcription factor JUNGBRUNNEN 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SK55]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.