Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr9P10040_001 | Banana | nucleus | 75.66 | 66.45 |
| GSMUA_Achr7P00860_001 | Banana | nucleus | 55.81 | 56.87 |
| GSMUA_Achr4P32010_001 | Banana | nucleus | 59.18 | 55.05 |
| GSMUA_Achr4P23030_001 | Banana | nucleus | 49.81 | 53.2 |
| GSMUA_Achr5P02170_001 | Banana | nucleus | 59.93 | 52.12 |
| VIT_19s0027g00880.t01 | Wine grape | nucleus | 41.57 | 51.87 |
| VIT_12s0028g00860.t01 | Wine grape | nucleus | 55.43 | 49.66 |
| Bra000282.1-P | Field mustard | nucleus | 48.69 | 47.79 |
| VIT_19s0027g00870.t01 | Wine grape | nucleus | 48.69 | 46.93 |
| VIT_19s0027g00860.t01 | Wine grape | nucleus | 47.57 | 46.01 |
| AT2G43000.1 | Thale cress | nucleus | 47.19 | 45.82 |
| VIT_19s0027g00840.t01 | Wine grape | nucleus | 48.69 | 45.77 |
| PGSC0003DMT400003082 | Potato | nucleus | 48.31 | 45.74 |
| KRH73618 | Soybean | cytosol | 54.31 | 45.31 |
| CDY30373 | Canola | nucleus | 46.82 | 45.13 |
| Bra037743.1-P | Field mustard | nucleus | 46.82 | 45.13 |
| KRH14512 | Soybean | nucleus | 55.06 | 45.09 |
| PGSC0003DMT400090327 | Potato | cytosol | 47.94 | 45.07 |
| KRH46012 | Soybean | nucleus | 51.31 | 45.07 |
| CDY55499 | Canola | nucleus | 46.82 | 44.8 |
| KRG98971 | Soybean | nucleus | 50.94 | 44.74 |
| Bra004736.1-P | Field mustard | nucleus | 46.82 | 44.64 |
| PGSC0003DMT400054407 | Potato | nucleus | 52.43 | 44.59 |
| Solyc02g069960.2.1 | Tomato | nucleus | 51.69 | 44.52 |
| CDY53654 | Canola | nucleus | 46.44 | 44.44 |
| Solyc05g021090.2.1 | Tomato | nucleus | 46.44 | 44.44 |
| CDY14865 | Canola | nucleus | 46.07 | 44.4 |
| KRH13702 | Soybean | nucleus | 51.31 | 43.08 |
| CDY43391 | Canola | nucleus | 47.57 | 43.05 |
| CDY64562 | Canola | nucleus | 47.19 | 42.86 |
| CDX82569 | Canola | nucleus | 48.31 | 42.72 |
| VIT_19s0027g00910.t01 | Wine grape | cytoskeleton, cytosol, nucleus | 47.19 | 42.71 |
| CDY24238 | Canola | nucleus | 49.06 | 42.67 |
| Bra039353.1-P | Field mustard | nucleus | 48.31 | 42.02 |
| Solyc07g045030.2.1 | Tomato | nucleus | 51.31 | 41.39 |
| AT3G12910.1 | Thale cress | nucleus | 46.07 | 40.59 |
| CDY60122 | Canola | nucleus | 48.31 | 39.45 |
| Bra034719.1-P | Field mustard | nucleus | 47.94 | 39.14 |
| GSMUA_Achr7P21770_001 | Banana | nucleus | 28.84 | 38.5 |
| PGSC0003DMT400049124 | Potato | nucleus | 35.96 | 38.4 |
| CDY23551 | Canola | nucleus | 47.57 | 33.87 |
| GSMUA_Achr5P19060_001 | Banana | nucleus | 29.96 | 32.79 |
| GSMUA_Achr10P... | Banana | nucleus | 31.09 | 32.55 |
| GSMUA_Achr11P... | Banana | nucleus | 31.46 | 32.06 |
| GSMUA_Achr5P17060_001 | Banana | nucleus | 33.71 | 31.91 |
| GSMUA_AchrUn_... | Banana | nucleus | 30.34 | 31.03 |
| GSMUA_Achr4P02390_001 | Banana | nucleus | 30.34 | 30.68 |
| GSMUA_Achr7P23250_001 | Banana | nucleus | 29.59 | 29.48 |
| GSMUA_Achr6P18720_001 | Banana | nucleus | 29.96 | 29.2 |
| GSMUA_Achr6P25380_001 | Banana | nucleus | 29.96 | 29.2 |
| GSMUA_Achr1P02710_001 | Banana | nucleus | 29.59 | 29.04 |
| GSMUA_Achr6P02680_001 | Banana | nucleus | 41.2 | 28.57 |
| GSMUA_Achr6P32330_001 | Banana | cytosol | 28.84 | 28.52 |
| GSMUA_Achr3P14720_001 | Banana | nucleus | 30.71 | 28.37 |
| GSMUA_Achr3P00560_001 | Banana | nucleus | 29.59 | 28.32 |
| GSMUA_Achr5P07590_001 | Banana | nucleus | 30.71 | 28.28 |
| GSMUA_Achr7P04030_001 | Banana | nucleus | 29.96 | 28.07 |
| GSMUA_Achr4P10310_001 | Banana | nucleus | 30.71 | 27.99 |
| GSMUA_Achr7P21780_001 | Banana | nucleus | 30.71 | 27.52 |
| GSMUA_Achr11P... | Banana | nucleus | 32.58 | 27.36 |
| GSMUA_Achr6P17720_001 | Banana | nucleus | 29.59 | 27.24 |
| GSMUA_Achr11P... | Banana | nucleus | 33.71 | 26.87 |
| GSMUA_Achr1P18110_001 | Banana | cytosol, nucleus, plastid | 21.72 | 26.73 |
| GSMUA_Achr10P... | Banana | nucleus | 32.21 | 26.3 |
| GSMUA_Achr10P... | Banana | nucleus | 33.33 | 26.25 |
| GSMUA_Achr7P23650_001 | Banana | nucleus | 34.08 | 26.15 |
| GSMUA_Achr10P... | Banana | cytosol | 41.2 | 26.07 |
| GSMUA_Achr10P... | Banana | nucleus | 28.84 | 25.5 |
| CDY42810 | Canola | nucleus | 48.31 | 25.29 |
| CDX83510 | Canola | nucleus | 48.31 | 25.29 |
| GSMUA_Achr10P... | Banana | cytosol | 28.46 | 25.0 |
| GSMUA_Achr3P21690_001 | Banana | nucleus | 32.96 | 24.72 |
| GSMUA_Achr4P02380_001 | Banana | nucleus | 30.71 | 24.55 |
| GSMUA_AchrUn_... | Banana | nucleus | 29.21 | 23.85 |
| GSMUA_Achr6P32320_001 | Banana | nucleus | 30.71 | 23.77 |
| GSMUA_Achr3P18990_001 | Banana | plastid | 29.59 | 23.72 |
| GSMUA_Achr9P19520_001 | Banana | nucleus | 28.84 | 23.62 |
| GSMUA_Achr3P18010_001 | Banana | nucleus | 29.96 | 21.74 |
| GSMUA_Achr1P08860_001 | Banana | nucleus | 29.21 | 21.73 |
| GSMUA_Achr9P04960_001 | Banana | nucleus | 31.46 | 21.16 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSMUA_Achr10G08420_001 |
| EnsemblPlants:GSMUA_Achr10P08420_001 | EnsemblPlants:GSMUA_Achr10T08420_001 | InterPro:IPR003441 | InterPro:IPR036093 | UniProt:M0RGG8 | InterPro:NAC-dom |
| InterPro:NAC_dom_sf | PFAM:PF02365 | PFscan:PS51005 | PANTHER:PTHR44543 | SUPFAM:SSF101941 | UniParc:UPI000294E6E6 |
Description
Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr10G08420_001]
Coordinates
chr10:+:18410301..18411711
Molecular Weight (calculated)
30565.2 Da
IEP (calculated)
8.198
GRAVY (calculated)
-0.639
Length
267 amino acids
Sequence
(BLAST)
(BLAST)
001: MEEKREKAGL QQGITVEEEE GKDVVLPGFR FHPTDEELVG FYLRRKVAKK AFSIDIIKEI DIYKHDPWDL PKVMSSAGEK EWYFFCLRGR KYRNSIRPNR
101: VTGSGFWKAT GIDRSICSAG RCIGLKKSLV YYTGSAGKGT KTDWMMHEFR LPCTNTDNTC PTMQEAEIWT ICRIFQRSIA APKRSWRDSI SKKKSDDGND
201: EFRFDASSDC QTHASQRNSV AQAPMAALHS DVGPTPYAND FFPDGNWDEL GRMVEFMTVQ NVFSYCK
101: VTGSGFWKAT GIDRSICSAG RCIGLKKSLV YYTGSAGKGT KTDWMMHEFR LPCTNTDNTC PTMQEAEIWT ICRIFQRSIA APKRSWRDSI SKKKSDDGND
201: EFRFDASSDC QTHASQRNSV AQAPMAALHS DVGPTPYAND FFPDGNWDEL GRMVEFMTVQ NVFSYCK
001: MSGEGNLGKD HEEENEAPLP GFRFHPTDEE LLGYYLRRKV ENKTIKLELI KQIDIYKYDP WDLPRVSSVG EKEWYFFCMR GRKYRNSVRP NRVTGSGFWK
101: ATGIDKPVYS NLDCVGLKKS LVYYLGSAGK GTKTDWMMHE FRLPSTTKTD SPAQQAEVWT LCRIFKRVTS QRNPTILPPN RKPVITLTDT CSKTSSLDSD
201: HTSHRTVDSM SHEPPLPQPQ NPYWNQHIVG FNQPTYTGND NNLLMSFWNG NGGDFIGDSA SWDELRSVID GNTKP
101: ATGIDKPVYS NLDCVGLKKS LVYYLGSAGK GTKTDWMMHE FRLPSTTKTD SPAQQAEVWT LCRIFKRVTS QRNPTILPPN RKPVITLTDT CSKTSSLDSD
201: HTSHRTVDSM SHEPPLPQPQ NPYWNQHIVG FNQPTYTGND NNLLMSFWNG NGGDFIGDSA SWDELRSVID GNTKP
Arabidopsis Description
JUB1Transcription factor JUNGBRUNNEN 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SK55]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.