Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr10P... | Banana | cytosol | 66.45 | 75.66 |
| GSMUA_Achr7P00860_001 | Banana | nucleus | 50.99 | 59.16 |
| GSMUA_Achr4P32010_001 | Banana | nucleus | 55.26 | 58.54 |
| GSMUA_Achr4P23030_001 | Banana | nucleus | 47.7 | 58.0 |
| GSMUA_Achr5P02170_001 | Banana | nucleus | 56.91 | 56.35 |
| VIT_19s0027g00880.t01 | Wine grape | nucleus | 38.82 | 55.14 |
| VIT_12s0028g00860.t01 | Wine grape | nucleus | 50.99 | 52.01 |
| KRH73618 | Soybean | cytosol | 53.62 | 50.94 |
| VIT_19s0027g00870.t01 | Wine grape | nucleus | 46.05 | 50.54 |
| Bra000282.1-P | Field mustard | nucleus | 45.07 | 50.37 |
| VIT_19s0027g00860.t01 | Wine grape | nucleus | 45.39 | 50.0 |
| VIT_19s0027g00840.t01 | Wine grape | nucleus | 46.05 | 49.3 |
| PGSC0003DMT400003082 | Potato | nucleus | 45.72 | 49.29 |
| AT2G43000.1 | Thale cress | nucleus | 44.41 | 49.09 |
| KRH14512 | Soybean | nucleus | 52.63 | 49.08 |
| PGSC0003DMT400090327 | Potato | cytosol | 45.07 | 48.24 |
| CDY53654 | Canola | nucleus | 44.08 | 48.03 |
| Solyc05g021090.2.1 | Tomato | nucleus | 44.08 | 48.03 |
| KRH46012 | Soybean | nucleus | 48.03 | 48.03 |
| KRG98971 | Soybean | nucleus | 48.03 | 48.03 |
| CDY30373 | Canola | nucleus | 43.75 | 48.01 |
| Bra037743.1-P | Field mustard | nucleus | 43.75 | 48.01 |
| PGSC0003DMT400054407 | Potato | nucleus | 49.34 | 47.77 |
| Solyc02g069960.2.1 | Tomato | nucleus | 48.68 | 47.74 |
| CDY14865 | Canola | nucleus | 43.42 | 47.65 |
| CDY55499 | Canola | nucleus | 43.42 | 47.31 |
| Bra004736.1-P | Field mustard | nucleus | 43.42 | 47.14 |
| CDY43391 | Canola | nucleus | 45.07 | 46.44 |
| KRH13702 | Soybean | nucleus | 48.36 | 46.23 |
| VIT_19s0027g00910.t01 | Wine grape | cytoskeleton, cytosol, nucleus | 44.41 | 45.76 |
| CDY24238 | Canola | nucleus | 46.05 | 45.6 |
| CDY64562 | Canola | nucleus | 44.08 | 45.58 |
| Bra039353.1-P | Field mustard | nucleus | 45.39 | 44.95 |
| CDX82569 | Canola | nucleus | 44.08 | 44.37 |
| Solyc07g045030.2.1 | Tomato | nucleus | 46.38 | 42.6 |
| AT3G12910.1 | Thale cress | nucleus | 42.43 | 42.57 |
| CDY60122 | Canola | nucleus | 45.39 | 42.2 |
| Bra034719.1-P | Field mustard | nucleus | 45.07 | 41.9 |
| PGSC0003DMT400049124 | Potato | nucleus | 33.55 | 40.8 |
| GSMUA_Achr7P21770_001 | Banana | nucleus | 26.32 | 40.0 |
| CDY23551 | Canola | nucleus | 44.74 | 36.27 |
| GSMUA_Achr5P19060_001 | Banana | nucleus | 26.97 | 33.61 |
| GSMUA_Achr11P... | Banana | nucleus | 28.95 | 33.59 |
| GSMUA_AchrUn_... | Banana | nucleus | 28.29 | 32.95 |
| GSMUA_Achr5P17060_001 | Banana | nucleus | 30.26 | 32.62 |
| GSMUA_Achr4P02390_001 | Banana | nucleus | 27.96 | 32.2 |
| GSMUA_Achr10P... | Banana | nucleus | 26.97 | 32.16 |
| GSMUA_Achr1P02710_001 | Banana | nucleus | 28.62 | 31.99 |
| GSMUA_Achr3P14720_001 | Banana | nucleus | 29.93 | 31.49 |
| GSMUA_Achr3P00560_001 | Banana | nucleus | 27.96 | 30.47 |
| GSMUA_Achr6P02680_001 | Banana | nucleus | 38.16 | 30.13 |
| GSMUA_Achr6P32330_001 | Banana | cytosol | 26.64 | 30.0 |
| GSMUA_Achr6P18720_001 | Banana | nucleus | 26.64 | 29.56 |
| GSMUA_Achr7P23250_001 | Banana | nucleus | 25.99 | 29.48 |
| GSMUA_Achr5P07590_001 | Banana | nucleus | 27.96 | 29.31 |
| GSMUA_Achr7P04030_001 | Banana | nucleus | 27.3 | 29.12 |
| GSMUA_Achr7P21780_001 | Banana | nucleus | 28.29 | 28.86 |
| GSMUA_Achr6P25380_001 | Banana | nucleus | 25.99 | 28.83 |
| GSMUA_Achr4P10310_001 | Banana | nucleus | 27.63 | 28.67 |
| GSMUA_Achr11P... | Banana | nucleus | 29.93 | 28.62 |
| GSMUA_Achr11P... | Banana | nucleus | 31.25 | 28.36 |
| GSMUA_Achr10P... | Banana | cytosol | 39.14 | 28.2 |
| GSMUA_Achr7P23650_001 | Banana | nucleus | 32.24 | 28.16 |
| GSMUA_Achr1P18110_001 | Banana | cytosol, nucleus, plastid | 20.07 | 28.11 |
| GSMUA_Achr10P... | Banana | nucleus | 30.92 | 27.73 |
| GSMUA_Achr6P17720_001 | Banana | nucleus | 26.32 | 27.59 |
| GSMUA_Achr10P... | Banana | nucleus | 27.3 | 27.48 |
| GSMUA_Achr10P... | Banana | nucleus | 28.95 | 26.91 |
| CDY42810 | Canola | nucleus | 44.74 | 26.67 |
| CDX83510 | Canola | nucleus | 44.74 | 26.67 |
| GSMUA_Achr6P32320_001 | Banana | nucleus | 29.61 | 26.09 |
| GSMUA_Achr4P02380_001 | Banana | nucleus | 28.62 | 26.05 |
| GSMUA_Achr10P... | Banana | cytosol | 25.99 | 25.99 |
| GSMUA_Achr3P21690_001 | Banana | nucleus | 30.26 | 25.84 |
| GSMUA_AchrUn_... | Banana | nucleus | 26.64 | 24.77 |
| GSMUA_Achr9P19520_001 | Banana | nucleus | 26.32 | 24.54 |
| GSMUA_Achr3P18990_001 | Banana | plastid | 26.32 | 24.02 |
| GSMUA_Achr3P18010_001 | Banana | nucleus | 28.95 | 23.91 |
| GSMUA_Achr1P08860_001 | Banana | nucleus | 26.64 | 22.56 |
| GSMUA_Achr9P04960_001 | Banana | nucleus | 27.63 | 21.16 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSMUA_Achr9G10040_001 |
| EnsemblPlants:GSMUA_Achr9P10040_001 | EnsemblPlants:GSMUA_Achr9T10040_001 | InterPro:IPR003441 | InterPro:IPR036093 | UniProt:M0TZ13 | InterPro:NAC-dom |
| InterPro:NAC_dom_sf | PFAM:PF02365 | PFscan:PS51005 | PANTHER:PTHR44543 | SUPFAM:SSF101941 | UniParc:UPI000294FB86 |
| SEG:seg | : | : | : | : | : |
Description
NAC domain protein, IPR003441 [Source:GMGC_GENE;Acc:GSMUA_Achr9G10040_001]
Coordinates
chr9:+:6462095..6463174
Molecular Weight (calculated)
35062.9 Da
IEP (calculated)
5.791
GRAVY (calculated)
-0.782
Length
304 amino acids
Sequence
(BLAST)
(BLAST)
001: MEERREKSGE QQVRVVEEEE EEAAEDDPVL PGFRFHPTDE ELVGFYLRRK VEKKCFSIEI IREIDIYKHD PWDLPKVVSA REKEWYFFCL RGRKYRNSIR
101: PNRVTGSGFW KATGIDRPIY SAKDPGGECI GLKKSLVYYR GSAGKGTKTD WMMHEYRLPC KNSDTATPSI HEAEIWTICR IFKRNTFKKS WKQSNNVKLP
201: TDSSSKSSSF ESDDGGNEFK FLASSSYLNE EEMKYVGNCF AENEQIYGSQ WNSMAQAPTP TLHSDVVSTT PSVNDFFRDG NWDELGRIVG FMTDQSVASC
301: CQYP
101: PNRVTGSGFW KATGIDRPIY SAKDPGGECI GLKKSLVYYR GSAGKGTKTD WMMHEYRLPC KNSDTATPSI HEAEIWTICR IFKRNTFKKS WKQSNNVKLP
201: TDSSSKSSSF ESDDGGNEFK FLASSSYLNE EEMKYVGNCF AENEQIYGSQ WNSMAQAPTP TLHSDVVSTT PSVNDFFRDG NWDELGRIVG FMTDQSVASC
301: CQYP
001: MSGEGNLGKD HEEENEAPLP GFRFHPTDEE LLGYYLRRKV ENKTIKLELI KQIDIYKYDP WDLPRVSSVG EKEWYFFCMR GRKYRNSVRP NRVTGSGFWK
101: ATGIDKPVYS NLDCVGLKKS LVYYLGSAGK GTKTDWMMHE FRLPSTTKTD SPAQQAEVWT LCRIFKRVTS QRNPTILPPN RKPVITLTDT CSKTSSLDSD
201: HTSHRTVDSM SHEPPLPQPQ NPYWNQHIVG FNQPTYTGND NNLLMSFWNG NGGDFIGDSA SWDELRSVID GNTKP
101: ATGIDKPVYS NLDCVGLKKS LVYYLGSAGK GTKTDWMMHE FRLPSTTKTD SPAQQAEVWT LCRIFKRVTS QRNPTILPPN RKPVITLTDT CSKTSSLDSD
201: HTSHRTVDSM SHEPPLPQPQ NPYWNQHIVG FNQPTYTGND NNLLMSFWNG NGGDFIGDSA SWDELRSVID GNTKP
Arabidopsis Description
JUB1Transcription factor JUNGBRUNNEN 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SK55]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.