Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr4P32010_001 | Banana | nucleus | 58.96 | 63.07 |
| GSMUA_Achr7P00860_001 | Banana | nucleus | 51.79 | 60.69 |
| GSMUA_Achr10P... | Banana | cytosol | 52.12 | 59.93 |
| GSMUA_Achr4P23030_001 | Banana | nucleus | 47.56 | 58.4 |
| GSMUA_Achr9P10040_001 | Banana | nucleus | 56.35 | 56.91 |
| VIT_19s0027g00880.t01 | Wine grape | nucleus | 38.76 | 55.61 |
| VIT_12s0028g00860.t01 | Wine grape | nucleus | 52.77 | 54.36 |
| Zm00001d007850_P001 | Maize | nucleus | 42.35 | 51.79 |
| VIT_19s0027g00870.t01 | Wine grape | nucleus | 46.25 | 51.26 |
| VIT_19s0027g00860.t01 | Wine grape | nucleus | 45.93 | 51.09 |
| VIT_19s0027g00840.t01 | Wine grape | nucleus | 46.58 | 50.35 |
| Bra000282.1-P | Field mustard | nucleus | 43.65 | 49.26 |
| CDY53654 | Canola | nucleus | 44.3 | 48.75 |
| PGSC0003DMT400090327 | Potato | cytosol | 44.95 | 48.59 |
| CDY55499 | Canola | nucleus | 43.65 | 48.03 |
| AT2G43000.1 | Thale cress | nucleus | 43.0 | 48.0 |
| Bra004736.1-P | Field mustard | nucleus | 43.65 | 47.86 |
| CDY30373 | Canola | nucleus | 43.0 | 47.65 |
| Bra037743.1-P | Field mustard | nucleus | 43.0 | 47.65 |
| CDY14865 | Canola | nucleus | 42.35 | 46.93 |
| KRH73618 | Soybean | cytosol | 48.86 | 46.88 |
| PGSC0003DMT400003082 | Potato | nucleus | 43.0 | 46.81 |
| KRH14512 | Soybean | nucleus | 49.51 | 46.63 |
| HORVU5Hr1G099470.2 | Barley | cytosol | 51.14 | 46.59 |
| VIT_19s0027g00910.t01 | Wine grape | cytoskeleton, cytosol, nucleus | 44.63 | 46.44 |
| KRH46012 | Soybean | nucleus | 45.93 | 46.38 |
| PGSC0003DMT400054407 | Potato | nucleus | 46.58 | 45.54 |
| Solyc02g069960.2.1 | Tomato | nucleus | 45.93 | 45.48 |
| KRG98971 | Soybean | nucleus | 44.95 | 45.39 |
| TraesCS5A01G411900.1 | Wheat | nucleus | 50.49 | 45.19 |
| Solyc05g021090.2.1 | Tomato | nucleus | 41.04 | 45.16 |
| TraesCS5D01G421100.1 | Wheat | nucleus | 49.84 | 44.87 |
| Os03t0777000-01 | Rice | nucleus | 52.77 | 44.75 |
| KRH13702 | Soybean | nucleus | 46.25 | 44.65 |
| Zm00001d013151_P001 | Maize | cytosol | 48.86 | 44.64 |
| EER93360 | Sorghum | nucleus | 53.42 | 44.32 |
| CDY43391 | Canola | nucleus | 42.35 | 44.07 |
| TraesCS5B01G415700.1 | Wheat | nucleus | 50.16 | 44.0 |
| TraesCS4B01G384700.1 | Wheat | cytoskeleton, cytosol, nucleus | 48.53 | 43.82 |
| TraesCS5B01G415600.1 | Wheat | nucleus | 49.84 | 43.59 |
| TraesCS5A01G411800.1 | Wheat | nucleus | 49.84 | 43.47 |
| HORVU5Hr1G099460.1 | Barley | nucleus | 48.86 | 43.35 |
| CDY24238 | Canola | nucleus | 43.32 | 43.32 |
| HORVU5Hr1G099390.2 | Barley | nucleus | 40.72 | 43.25 |
| CDY64562 | Canola | nucleus | 41.37 | 43.2 |
| EER95852 | Sorghum | nucleus | 48.21 | 43.15 |
| TraesCS5D01G420800.1 | Wheat | nucleus | 51.14 | 43.13 |
| CDX82569 | Canola | nucleus | 42.35 | 43.05 |
| Bra039353.1-P | Field mustard | nucleus | 43.0 | 43.0 |
| AT3G12910.1 | Thale cress | nucleus | 42.02 | 42.57 |
| Zm00001d034277_P001 | Maize | cytosol, mitochondrion, nucleus | 50.81 | 42.39 |
| TraesCS5B01G415400.1 | Wheat | nucleus | 51.79 | 42.18 |
| TraesCS5A01G411700.1 | Wheat | nucleus | 51.14 | 41.64 |
| Solyc07g045030.2.1 | Tomato | nucleus | 44.63 | 41.39 |
| Zm00001d018773_P001 | Maize | nucleus | 47.88 | 41.06 |
| CDY60122 | Canola | nucleus | 43.32 | 40.67 |
| GSMUA_Achr7P21770_001 | Banana | nucleus | 26.38 | 40.5 |
| Bra034719.1-P | Field mustard | nucleus | 43.0 | 40.37 |
| TraesCS5D01G421000.1 | Wheat | nucleus | 49.84 | 39.84 |
| PGSC0003DMT400049124 | Potato | nucleus | 30.94 | 38.0 |
| CDY23551 | Canola | nucleus | 43.32 | 35.47 |
| GSMUA_Achr10P... | Banana | nucleus | 27.36 | 32.94 |
| GSMUA_AchrUn_... | Banana | nucleus | 27.69 | 32.57 |
| GSMUA_Achr5P19060_001 | Banana | nucleus | 25.73 | 32.38 |
| GSMUA_Achr6P32330_001 | Banana | cytosol | 28.01 | 31.85 |
| GSMUA_Achr11P... | Banana | nucleus | 26.71 | 31.3 |
| GSMUA_Achr5P17060_001 | Banana | nucleus | 28.66 | 31.21 |
| GSMUA_Achr4P02390_001 | Banana | nucleus | 26.71 | 31.06 |
| GSMUA_Achr1P02710_001 | Banana | nucleus | 27.36 | 30.88 |
| GSMUA_Achr5P07590_001 | Banana | nucleus | 28.99 | 30.69 |
| GSMUA_Achr6P25380_001 | Banana | nucleus | 26.71 | 29.93 |
| GSMUA_Achr7P23250_001 | Banana | nucleus | 26.06 | 29.85 |
| GSMUA_Achr11P... | Banana | nucleus | 30.62 | 29.56 |
| GSMUA_Achr11P... | Banana | nucleus | 31.92 | 29.25 |
| GSMUA_Achr6P18720_001 | Banana | nucleus | 26.06 | 29.2 |
| GSMUA_Achr6P17720_001 | Banana | nucleus | 27.04 | 28.62 |
| GSMUA_Achr6P02680_001 | Banana | nucleus | 35.83 | 28.57 |
| GSMUA_Achr7P21780_001 | Banana | nucleus | 27.69 | 28.52 |
| GSMUA_Achr10P... | Banana | nucleus | 30.29 | 28.44 |
| GSMUA_Achr3P14720_001 | Banana | nucleus | 26.71 | 28.37 |
| GSMUA_Achr10P... | Banana | nucleus | 31.27 | 28.32 |
| GSMUA_Achr7P23650_001 | Banana | nucleus | 31.92 | 28.16 |
| GSMUA_Achr3P00560_001 | Banana | nucleus | 25.41 | 27.96 |
| GSMUA_Achr10P... | Banana | nucleus | 27.36 | 27.81 |
| GSMUA_Achr3P21690_001 | Banana | nucleus | 31.92 | 27.53 |
| GSMUA_Achr4P10310_001 | Banana | nucleus | 26.06 | 27.3 |
| CDX83510 | Canola | nucleus | 44.95 | 27.06 |
| GSMUA_Achr9P19520_001 | Banana | nucleus | 28.34 | 26.69 |
| GSMUA_Achr7P04030_001 | Banana | nucleus | 24.76 | 26.67 |
| GSMUA_Achr10P... | Banana | cytosol | 36.48 | 26.54 |
| CDY42810 | Canola | nucleus | 43.97 | 26.47 |
| GSMUA_Achr6P32320_001 | Banana | nucleus | 29.64 | 26.38 |
| GSMUA_AchrUn_... | Banana | nucleus | 27.69 | 25.99 |
| GSMUA_Achr10P... | Banana | cytosol | 25.73 | 25.99 |
| GSMUA_Achr1P18110_001 | Banana | cytosol, nucleus, plastid | 18.24 | 25.81 |
| GSMUA_Achr4P02380_001 | Banana | nucleus | 28.01 | 25.75 |
| GSMUA_Achr3P18990_001 | Banana | plastid | 27.04 | 24.92 |
| GSMUA_Achr3P18010_001 | Banana | nucleus | 28.99 | 24.18 |
| GSMUA_Achr1P08860_001 | Banana | nucleus | 27.69 | 23.68 |
| GSMUA_Achr9P04960_001 | Banana | nucleus | 28.34 | 21.91 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSMUA_Achr5G02170_001 |
| EnsemblPlants:GSMUA_Achr5P02170_001 | EnsemblPlants:GSMUA_Achr5T02170_001 | InterPro:IPR003441 | InterPro:IPR036093 | UniProt:M0SUZ6 | InterPro:NAC-dom |
| InterPro:NAC_dom_sf | PFAM:PF02365 | PFscan:PS51005 | PANTHER:PTHR44543 | SUPFAM:SSF101941 | UniParc:UPI000296A150 |
Description
Whole genome shotgun sequence of line PN40024, scaffold_28.assembly12x (Fragment) [Source:GMGC_GENE;Acc:GSMUA_Achr5G02170_001]
Coordinates
chr5:+:1384025..1385346
Molecular Weight (calculated)
34803.7 Da
IEP (calculated)
6.705
GRAVY (calculated)
-0.712
Length
307 amino acids
Sequence
(BLAST)
(BLAST)
001: MEKKGEQEAV AVGEQKEEDV VLPGFRFHPT DEELVGFYLR RKVEKKPLSV EIIKEVDIYK YDPWDLPTIT AGENEWYFFC LRGRKYRNSI RPNRVTGSGF
101: WKATGIDRPI HPAAGHAAAC IGLKKSLVYY RGSAGKGTKT DWMMHEFRLP AGGSGKITTT PSMHEAEIWT ICRIFKRSPI SYRKQTNSWR EASTSSSTRK
201: QIAADSSCVT SSFECDNGND YRCCASSGHS NGEQGEMELA THYYQENNQV SGGQWNPIHQ PPLLYTNAGQ SPTMDECFRS DGDWDELGRI VEFMRDQTLL
301: PYDCGYT
101: WKATGIDRPI HPAAGHAAAC IGLKKSLVYY RGSAGKGTKT DWMMHEFRLP AGGSGKITTT PSMHEAEIWT ICRIFKRSPI SYRKQTNSWR EASTSSSTRK
201: QIAADSSCVT SSFECDNGND YRCCASSGHS NGEQGEMELA THYYQENNQV SGGQWNPIHQ PPLLYTNAGQ SPTMDECFRS DGDWDELGRI VEFMRDQTLL
301: PYDCGYT
001: MSGEGNLGKD HEEENEAPLP GFRFHPTDEE LLGYYLRRKV ENKTIKLELI KQIDIYKYDP WDLPRVSSVG EKEWYFFCMR GRKYRNSVRP NRVTGSGFWK
101: ATGIDKPVYS NLDCVGLKKS LVYYLGSAGK GTKTDWMMHE FRLPSTTKTD SPAQQAEVWT LCRIFKRVTS QRNPTILPPN RKPVITLTDT CSKTSSLDSD
201: HTSHRTVDSM SHEPPLPQPQ NPYWNQHIVG FNQPTYTGND NNLLMSFWNG NGGDFIGDSA SWDELRSVID GNTKP
101: ATGIDKPVYS NLDCVGLKKS LVYYLGSAGK GTKTDWMMHE FRLPSTTKTD SPAQQAEVWT LCRIFKRVTS QRNPTILPPN RKPVITLTDT CSKTSSLDSD
201: HTSHRTVDSM SHEPPLPQPQ NPYWNQHIVG FNQPTYTGND NNLLMSFWNG NGGDFIGDSA SWDELRSVID GNTKP
Arabidopsis Description
JUB1Transcription factor JUNGBRUNNEN 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SK55]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.