Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400054407 | Potato | nucleus | 55.28 | 50.0 |
| GSMUA_Achr7P00860_001 | Banana | nucleus | 45.77 | 49.62 |
| GSMUA_Achr4P23030_001 | Banana | nucleus | 42.96 | 48.8 |
| GSMUA_Achr10P... | Banana | cytosol | 45.07 | 47.94 |
| PGSC0003DMT400003082 | Potato | nucleus | 47.54 | 47.87 |
| Zm00001d007850_P001 | Maize | nucleus | 40.85 | 46.22 |
| GSMUA_Achr4P32010_001 | Banana | nucleus | 46.13 | 45.64 |
| GSMUA_Achr9P10040_001 | Banana | nucleus | 48.24 | 45.07 |
| GSMUA_Achr5P02170_001 | Banana | nucleus | 48.59 | 44.95 |
| Zm00001d031164_P001 | Maize | nucleus | 43.66 | 40.52 |
| PGSC0003DMT400049124 | Potato | nucleus | 35.56 | 40.4 |
| EES17466 | Sorghum | nucleus | 42.61 | 39.8 |
| HORVU5Hr1G099470.2 | Barley | cytosol | 46.83 | 39.47 |
| HORVU5Hr1G099390.2 | Barley | nucleus | 40.14 | 39.45 |
| TraesCS5A01G411900.1 | Wheat | nucleus | 46.83 | 38.78 |
| Zm00001d013151_P001 | Maize | cytosol | 45.77 | 38.69 |
| TraesCS5B01G415700.1 | Wheat | nucleus | 47.18 | 38.29 |
| TraesCS5D01G421100.1 | Wheat | nucleus | 45.77 | 38.12 |
| EER95852 | Sorghum | nucleus | 45.42 | 37.61 |
| TraesCS5A01G411800.1 | Wheat | nucleus | 46.48 | 37.5 |
| Os03t0777000-01 | Rice | nucleus | 47.54 | 37.29 |
| TraesCS4B01G384700.1 | Wheat | cytoskeleton, cytosol, nucleus | 44.37 | 37.06 |
| TraesCS5D01G420800.1 | Wheat | nucleus | 47.18 | 36.81 |
| EER93360 | Sorghum | nucleus | 47.89 | 36.76 |
| TraesCS5B01G415600.1 | Wheat | nucleus | 45.42 | 36.75 |
| HORVU5Hr1G099460.1 | Barley | nucleus | 44.72 | 36.71 |
| Zm00001d034277_P001 | Maize | cytosol, mitochondrion, nucleus | 47.18 | 36.41 |
| TraesCS5B01G415400.1 | Wheat | nucleus | 47.54 | 35.81 |
| TraesCS5A01G411700.1 | Wheat | nucleus | 47.54 | 35.81 |
| Zm00001d018773_P001 | Maize | nucleus | 45.07 | 35.75 |
| TraesCS5D01G421000.1 | Wheat | nucleus | 46.83 | 34.64 |
| PGSC0003DMT400022365 | Potato | cytosol | 27.46 | 31.84 |
| PGSC0003DMT400023917 | Potato | nucleus | 31.34 | 30.58 |
| PGSC0003DMT400047440 | Potato | nucleus | 29.58 | 29.79 |
| PGSC0003DMT400045294 | Potato | nucleus | 30.99 | 29.73 |
| PGSC0003DMT400080307 | Potato | nucleus | 40.49 | 29.72 |
| PGSC0003DMT400007341 | Potato | mitochondrion | 29.58 | 29.68 |
| PGSC0003DMT400003343 | Potato | nucleus | 40.49 | 29.04 |
| PGSC0003DMT400028190 | Potato | nucleus | 28.52 | 28.03 |
| PGSC0003DMT400082472 | Potato | nucleus | 29.23 | 27.39 |
| PGSC0003DMT400093822 | Potato | nucleus | 27.82 | 26.6 |
| PGSC0003DMT400039670 | Potato | nucleus | 32.39 | 26.21 |
| PGSC0003DMT400049664 | Potato | nucleus | 30.28 | 25.37 |
| PGSC0003DMT400049665 | Potato | nucleus | 31.34 | 25.0 |
| PGSC0003DMT400047021 | Potato | nucleus | 34.86 | 24.5 |
| PGSC0003DMT400064428 | Potato | nucleus | 29.58 | 23.93 |
| PGSC0003DMT400048237 | Potato | nucleus | 28.52 | 16.56 |
Protein Annotations
| EntrezGene:102580381 | MapMan:15.5.17 | Gene3D:3.30.310.150 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| InterPro:IPR003441 | InterPro:IPR036093 | UniProt:M1DK55 | InterPro:NAC-dom | InterPro:NAC_dom_sf | PFAM:PF02365 |
| EnsemblPlantsGene:PGSC0003DMG400039898 | PGSC:PGSC0003DMG400039898 | EnsemblPlants:PGSC0003DMT400090327 | PFscan:PS51005 | PANTHER:PTHR44543 | SUPFAM:SSF101941 |
| UniParc:UPI0002969816 | RefSeq:XP_015163599.1 | SEG:seg | : | : | : |
Description
NAC domain protein [Source:PGSC_GENE;Acc:PGSC0003DMG400039898]
Coordinates
chr7:-:56511322..56512492
Molecular Weight (calculated)
32956.1 Da
IEP (calculated)
8.033
GRAVY (calculated)
-0.679
Length
284 amino acids
Sequence
(BLAST)
(BLAST)
001: MEVKSKMKYY TREEDEDEMA LPGFRFHPTD EELVGFYLRR KVEKRPLINI ELIKQIDIYK YEPWDLPKSS NMGEKEWYFF CKRGRKYRNS VRPNRVTGCG
101: FWKATGIDKP IYNSTHECIG LKKSLVYYRG SAGKGTKTDW MMHEFRLPAE NDKSTKHIEA KTIAQEAEVW TLCRIIKRNK CTVAAEWRIA AAAAKRNPVV
201: DSETCSADSS DYIISFGTAP TDIVHQDMMT SSTNNSNNQQ LLRSSSSILC TTQQPSSDMN FELLLKNNVD YWDELTSILD LDRY
101: FWKATGIDKP IYNSTHECIG LKKSLVYYRG SAGKGTKTDW MMHEFRLPAE NDKSTKHIEA KTIAQEAEVW TLCRIIKRNK CTVAAEWRIA AAAAKRNPVV
201: DSETCSADSS DYIISFGTAP TDIVHQDMMT SSTNNSNNQQ LLRSSSSILC TTQQPSSDMN FELLLKNNVD YWDELTSILD LDRY
001: MSGEGNLGKD HEEENEAPLP GFRFHPTDEE LLGYYLRRKV ENKTIKLELI KQIDIYKYDP WDLPRVSSVG EKEWYFFCMR GRKYRNSVRP NRVTGSGFWK
101: ATGIDKPVYS NLDCVGLKKS LVYYLGSAGK GTKTDWMMHE FRLPSTTKTD SPAQQAEVWT LCRIFKRVTS QRNPTILPPN RKPVITLTDT CSKTSSLDSD
201: HTSHRTVDSM SHEPPLPQPQ NPYWNQHIVG FNQPTYTGND NNLLMSFWNG NGGDFIGDSA SWDELRSVID GNTKP
101: ATGIDKPVYS NLDCVGLKKS LVYYLGSAGK GTKTDWMMHE FRLPSTTKTD SPAQQAEVWT LCRIFKRVTS QRNPTILPPN RKPVITLTDT CSKTSSLDSD
201: HTSHRTVDSM SHEPPLPQPQ NPYWNQHIVG FNQPTYTGND NNLLMSFWNG NGGDFIGDSA SWDELRSVID GNTKP
Arabidopsis Description
JUB1Transcription factor JUNGBRUNNEN 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SK55]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.