Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d031164_P001 | Maize | nucleus | 81.91 | 81.37 |
| GSMUA_Achr4P32010_001 | Banana | nucleus | 47.04 | 49.83 |
| VIT_19s0027g00880.t01 | Wine grape | nucleus | 33.88 | 48.13 |
| AT2G43000.1 | Thale cress | nucleus | 40.13 | 44.36 |
| VIT_19s0027g00860.t01 | Wine grape | nucleus | 39.47 | 43.48 |
| VIT_19s0027g00870.t01 | Wine grape | nucleus | 39.47 | 43.32 |
| Bra000282.1-P | Field mustard | nucleus | 38.49 | 43.01 |
| Bra037743.1-P | Field mustard | nucleus | 39.14 | 42.96 |
| CDY14865 | Canola | nucleus | 39.14 | 42.96 |
| CDY30373 | Canola | nucleus | 39.14 | 42.96 |
| VIT_12s0028g00860.t01 | Wine grape | nucleus | 42.11 | 42.95 |
| VIT_19s0027g00840.t01 | Wine grape | nucleus | 39.8 | 42.61 |
| PGSC0003DMT400090327 | Potato | cytosol | 39.8 | 42.61 |
| CDY53654 | Canola | nucleus | 38.49 | 41.94 |
| Bra004736.1-P | Field mustard | nucleus | 38.49 | 41.79 |
| CDY55499 | Canola | nucleus | 38.16 | 41.58 |
| Solyc05g021090.2.1 | Tomato | nucleus | 38.16 | 41.58 |
| PGSC0003DMT400003082 | Potato | nucleus | 38.16 | 41.13 |
| KRH13702 | Soybean | nucleus | 42.43 | 40.57 |
| VIT_19s0027g00910.t01 | Wine grape | cytoskeleton, cytosol, nucleus | 38.82 | 40.0 |
| KRH73618 | Soybean | cytosol | 41.78 | 39.69 |
| Solyc02g069960.2.1 | Tomato | nucleus | 40.46 | 39.68 |
| PGSC0003DMT400054407 | Potato | nucleus | 40.79 | 39.49 |
| KRH46012 | Soybean | nucleus | 39.47 | 39.47 |
| KRG98971 | Soybean | nucleus | 39.14 | 39.14 |
| CDY43391 | Canola | nucleus | 37.83 | 38.98 |
| CDY64562 | Canola | nucleus | 37.17 | 38.44 |
| Solyc07g045030.2.1 | Tomato | nucleus | 41.78 | 38.37 |
| KRH14512 | Soybean | nucleus | 41.12 | 38.34 |
| Bra039353.1-P | Field mustard | nucleus | 38.49 | 38.11 |
| CDY24238 | Canola | nucleus | 38.49 | 38.11 |
| CDX82569 | Canola | nucleus | 37.5 | 37.75 |
| EER95852 | Sorghum | nucleus | 42.11 | 37.32 |
| AT3G12910.1 | Thale cress | nucleus | 37.17 | 37.29 |
| EER93360 | Sorghum | nucleus | 45.07 | 37.03 |
| CDY60122 | Canola | nucleus | 39.47 | 36.7 |
| Bra034719.1-P | Field mustard | nucleus | 39.14 | 36.39 |
| PGSC0003DMT400049124 | Potato | nucleus | 29.28 | 35.6 |
| CDY23551 | Canola | nucleus | 39.47 | 32.0 |
| KXG33829 | Sorghum | nucleus | 26.97 | 28.18 |
| EES07261 | Sorghum | nucleus | 35.86 | 28.09 |
| EER96087 | Sorghum | nucleus | 26.64 | 27.93 |
| EES13897 | Sorghum | nucleus | 33.55 | 26.56 |
| EES03797 | Sorghum | nucleus | 27.3 | 26.27 |
| EER93215 | Sorghum | nucleus | 27.3 | 26.02 |
| OQU89481 | Sorghum | nucleus | 33.22 | 25.06 |
| EER92917 | Sorghum | nucleus | 25.99 | 24.16 |
| KXG22031 | Sorghum | nucleus | 25.99 | 23.17 |
| CDY42810 | Canola | nucleus | 38.49 | 22.94 |
| CDX83510 | Canola | nucleus | 38.16 | 22.75 |
| EES13251 | Sorghum | mitochondrion, nucleus | 27.63 | 22.46 |
| EER99924 | Sorghum | cytosol, nucleus, plastid | 28.62 | 22.42 |
| EER92326 | Sorghum | nucleus | 27.96 | 22.37 |
| EER99985 | Sorghum | nucleus | 25.99 | 22.32 |
| KXG32136 | Sorghum | plastid | 26.97 | 21.58 |
| OQU83033 | Sorghum | nucleus | 26.64 | 21.09 |
| OQU90111 | Sorghum | nucleus | 28.29 | 20.57 |
| EES19541 | Sorghum | nucleus | 26.97 | 19.57 |
| EES07907 | Sorghum | plastid | 25.33 | 19.15 |
| KXG20943 | Sorghum | nucleus, plastid | 24.01 | 18.91 |
| EES01882 | Sorghum | nucleus | 27.3 | 18.78 |
| EES16571 | Sorghum | nucleus | 25.33 | 17.95 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | EntrezGene:8065221 | UniProt:C5YSW0 | EnsemblPlants:EES17466 | ProteinID:EES17466 |
| ProteinID:EES17466.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR003441 | InterPro:IPR036093 |
| InterPro:NAC-dom | InterPro:NAC_dom_sf | PFAM:PF02365 | PFscan:PS51005 | PANTHER:PTHR44543 | PANTHER:PTHR44543:SF2 |
| EnsemblPlantsGene:SORBI_3008G183900 | SUPFAM:SSF101941 | UniParc:UPI0001A88B19 | RefSeq:XP_002443628.1 | SEG:seg | : |
Description
hypothetical protein
Coordinates
chr8:-:61820517..61821942
Molecular Weight (calculated)
35421.4 Da
IEP (calculated)
7.913
GRAVY (calculated)
-0.962
Length
304 amino acids
Sequence
(BLAST)
(BLAST)
001: MEEEKKPSQR ITKKENGGRA DDRNEEDDLV FPGFRFHPTD QELVGFYLKR KVEKKSFSID IIREIDIYKH DPWDLPNEAR DMVQGTGDKD CYFFCLRGRK
101: YRNSIRPNRV TGSGFWKATG IDKPIHDGAG ECVGLKKSLV YYRGSAGRGT KTDWMMHEFR LPSTELVELH DAEIWTICRI FKRSTSYNRR CQQQQKQEQG
201: SKRNHHQQQQ LQYYYDYYRY HQQQQHHYFH SSEAAYAATE HHQPFLLRGF HGSSPSSTEM TVSSGFMGVG PPLPPSTSNL GWSDVTCLQD SGSTWDELGR
301: IMEI
101: YRNSIRPNRV TGSGFWKATG IDKPIHDGAG ECVGLKKSLV YYRGSAGRGT KTDWMMHEFR LPSTELVELH DAEIWTICRI FKRSTSYNRR CQQQQKQEQG
201: SKRNHHQQQQ LQYYYDYYRY HQQQQHHYFH SSEAAYAATE HHQPFLLRGF HGSSPSSTEM TVSSGFMGVG PPLPPSTSNL GWSDVTCLQD SGSTWDELGR
301: IMEI
001: MSGEGNLGKD HEEENEAPLP GFRFHPTDEE LLGYYLRRKV ENKTIKLELI KQIDIYKYDP WDLPRVSSVG EKEWYFFCMR GRKYRNSVRP NRVTGSGFWK
101: ATGIDKPVYS NLDCVGLKKS LVYYLGSAGK GTKTDWMMHE FRLPSTTKTD SPAQQAEVWT LCRIFKRVTS QRNPTILPPN RKPVITLTDT CSKTSSLDSD
201: HTSHRTVDSM SHEPPLPQPQ NPYWNQHIVG FNQPTYTGND NNLLMSFWNG NGGDFIGDSA SWDELRSVID GNTKP
101: ATGIDKPVYS NLDCVGLKKS LVYYLGSAGK GTKTDWMMHE FRLPSTTKTD SPAQQAEVWT LCRIFKRVTS QRNPTILPPN RKPVITLTDT CSKTSSLDSD
201: HTSHRTVDSM SHEPPLPQPQ NPYWNQHIVG FNQPTYTGND NNLLMSFWNG NGGDFIGDSA SWDELRSVID GNTKP
Arabidopsis Description
JUB1Transcription factor JUNGBRUNNEN 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SK55]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.