Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra000282.1-P | Field mustard | nucleus | 86.18 | 87.13 |
| Bra004736.1-P | Field mustard | nucleus | 87.27 | 85.71 |
| CDY55499 | Canola | nucleus | 86.91 | 85.66 |
| CDY53654 | Canola | nucleus | 86.55 | 85.3 |
| CDY30373 | Canola | nucleus | 84.36 | 83.75 |
| CDY14865 | Canola | nucleus | 84.36 | 83.75 |
| Bra037743.1-P | Field mustard | nucleus | 84.36 | 83.75 |
| GSMUA_Achr7P00860_001 | Banana | nucleus | 46.18 | 48.47 |
| KRH73618 | Soybean | cytosol | 56.0 | 48.12 |
| GSMUA_Achr4P32010_001 | Banana | nucleus | 49.82 | 47.74 |
| GSMUA_Achr4P23030_001 | Banana | nucleus | 42.91 | 47.2 |
| GSMUA_Achr10P... | Banana | cytosol | 45.82 | 47.19 |
| KRH14512 | Soybean | nucleus | 55.64 | 46.93 |
| Zm00001d007850_P001 | Maize | nucleus | 42.18 | 46.22 |
| AT3G12910.1 | Thale cress | nucleus | 50.55 | 45.87 |
| CDY42810 | Canola | nucleus | 84.36 | 45.49 |
| CDX83510 | Canola | nucleus | 84.36 | 45.49 |
| GSMUA_Achr9P10040_001 | Banana | nucleus | 49.09 | 44.41 |
| Solyc07g045030.2.1 | Tomato | nucleus | 52.73 | 43.81 |
| GSMUA_Achr5P02170_001 | Banana | nucleus | 48.0 | 43.0 |
| PGSC0003DMT400049124 | Potato | nucleus | 38.18 | 42.0 |
| EES17466 | Sorghum | nucleus | 44.36 | 40.13 |
| Zm00001d031164_P001 | Maize | nucleus | 43.27 | 38.89 |
| HORVU5Hr1G099470.2 | Barley | cytosol | 46.91 | 38.28 |
| Zm00001d013151_P001 | Maize | cytosol | 46.55 | 38.1 |
| TraesCS5D01G421100.1 | Wheat | nucleus | 46.55 | 37.54 |
| HORVU5Hr1G099390.2 | Barley | nucleus | 39.27 | 37.37 |
| TraesCS5A01G411900.1 | Wheat | nucleus | 46.55 | 37.32 |
| EER95852 | Sorghum | nucleus | 46.55 | 37.32 |
| TraesCS5B01G415700.1 | Wheat | nucleus | 46.91 | 36.86 |
| TraesCS5B01G415600.1 | Wheat | nucleus | 46.18 | 36.18 |
| TraesCS4B01G384700.1 | Wheat | cytoskeleton, cytosol, nucleus | 44.73 | 36.18 |
| Zm00001d018773_P001 | Maize | nucleus | 46.91 | 36.03 |
| EER93360 | Sorghum | nucleus | 48.36 | 35.95 |
| Os03t0777000-01 | Rice | nucleus | 47.27 | 35.91 |
| HORVU5Hr1G099460.1 | Barley | nucleus | 44.73 | 35.55 |
| TraesCS5D01G420800.1 | Wheat | nucleus | 46.91 | 35.44 |
| Zm00001d034277_P001 | Maize | cytosol, mitochondrion, nucleus | 47.27 | 35.33 |
| TraesCS5A01G411800.1 | Wheat | nucleus | 45.09 | 35.23 |
| TraesCS5A01G411700.1 | Wheat | nucleus | 47.27 | 34.48 |
| TraesCS5B01G415400.1 | Wheat | nucleus | 46.91 | 34.22 |
| AT1G77450.1 | Thale cress | cytosol, nucleus, plastid | 30.91 | 33.6 |
| TraesCS5D01G421000.1 | Wheat | nucleus | 46.91 | 33.59 |
| AT5G39820.1 | Thale cress | nucleus | 38.91 | 31.75 |
| AT1G69490.1 | Thale cress | nucleus | 30.18 | 30.97 |
| AT1G01720.1 | Thale cress | nucleus | 32.0 | 30.45 |
| AT4G27410.3 | Thale cress | nucleus | 33.82 | 29.62 |
| AT5G08790.1 | Thale cress | nucleus | 30.18 | 29.33 |
| AT1G52890.1 | Thale cress | nucleus | 33.45 | 29.02 |
| AT3G15500.1 | Thale cress | nucleus | 33.09 | 28.71 |
| AT2G17040.1 | Thale cress | nucleus | 28.73 | 28.62 |
| AT1G61110.1 | Thale cress | nucleus | 31.64 | 26.93 |
| AT1G52880.1 | Thale cress | nucleus | 30.91 | 26.56 |
| AT1G26870.1 | Thale cress | nucleus | 39.64 | 26.08 |
| AT5G63790.2 | Thale cress | cytosol | 29.45 | 25.16 |
| AT3G15510.1 | Thale cress | nucleus | 30.91 | 23.35 |
| AT3G04070.1 | Thale cress | nucleus | 30.18 | 23.12 |
| AT2G02450.2 | Thale cress | nucleus | 33.45 | 22.22 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | EntrezGene:818902 | UniProt:A0A178VL40 | ProteinID:AAD22369.1 | EMBL:AB493587 |
| ProteinID:AEC10196.1 | ArrayExpress:AT2G43000 | EnsemblPlantsGene:AT2G43000 | RefSeq:AT2G43000 | TAIR:AT2G43000 | RefSeq:AT2G43000-TAIR-G |
| EnsemblPlants:AT2G43000.1 | TAIR:AT2G43000.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005975 |
| GO:GO:0005992 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0006561 | GO:GO:0006950 |
| GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009628 | GO:GO:0009718 |
| GO:GO:0009987 | GO:GO:0010120 | GO:GO:0010150 | GO:GO:0019748 | GO:GO:0042538 | GO:GO:1900056 |
| InterPro:IPR003441 | InterPro:IPR036093 | InterPro:NAC-dom | InterPro:NAC_dom_sf | RefSeq:NP_181828.1 | ProteinID:OAP07170.1 |
| PFAM:PF02365 | PO:PO:0000013 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0007098 |
| PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0009025 | PO:PO:0009029 |
| PO:PO:0009031 | PO:PO:0009047 | PO:PO:0020030 | PO:PO:0020100 | PO:PO:0025022 | PFscan:PS51005 |
| PANTHER:PTHR44543 | PANTHER:PTHR44543:SF2 | UniProt:Q9SK55 | SUPFAM:SSF101941 | UniParc:UPI00000A3EBF | Symbol:anac042 |
Description
JUB1Transcription factor JUNGBRUNNEN 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SK55]
Coordinates
chr2:-:17880457..17882636
Molecular Weight (calculated)
31458.0 Da
IEP (calculated)
8.299
GRAVY (calculated)
-0.791
Length
275 amino acids
Sequence
(BLAST)
(BLAST)
001: MSGEGNLGKD HEEENEAPLP GFRFHPTDEE LLGYYLRRKV ENKTIKLELI KQIDIYKYDP WDLPRVSSVG EKEWYFFCMR GRKYRNSVRP NRVTGSGFWK
101: ATGIDKPVYS NLDCVGLKKS LVYYLGSAGK GTKTDWMMHE FRLPSTTKTD SPAQQAEVWT LCRIFKRVTS QRNPTILPPN RKPVITLTDT CSKTSSLDSD
201: HTSHRTVDSM SHEPPLPQPQ NPYWNQHIVG FNQPTYTGND NNLLMSFWNG NGGDFIGDSA SWDELRSVID GNTKP
101: ATGIDKPVYS NLDCVGLKKS LVYYLGSAGK GTKTDWMMHE FRLPSTTKTD SPAQQAEVWT LCRIFKRVTS QRNPTILPPN RKPVITLTDT CSKTSSLDSD
201: HTSHRTVDSM SHEPPLPQPQ NPYWNQHIVG FNQPTYTGND NNLLMSFWNG NGGDFIGDSA SWDELRSVID GNTKP
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.