Factsheet for AT1G52890.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY26031	Canola	cytosol	46.06	96.69
CDY26032	Canola	cytosol	47.32	93.17
AT3G15500.1	Thale cress	nucleus	74.13	74.13
Bra018998.1-P	Field mustard	nucleus	83.6	69.19
AT4G27410.3	Thale cress	nucleus	60.25	60.83
VIT_19s0014g03290.t01	Wine grape	nucleus	60.88	57.96
KRH22137	Soybean	nucleus	60.25	55.69
KRH27201	Soybean	nucleus	60.25	55.36
Solyc12g013620.1.1	Tomato	nucleus	57.73	52.44
PGSC0003DMT400039670	Potato	nucleus	57.73	52.14
AT1G77450.1	Thale cress	cytosol, nucleus, plastid	35.65	44.66
AT1G01720.1	Thale cress	nucleus	38.8	42.56
AT5G08790.1	Thale cress	nucleus	37.22	41.7
AT1G69490.1	Thale cress	nucleus	34.07	40.3
AT1G61110.1	Thale cress	nucleus	39.12	38.39
AT1G52880.1	Thale cress	nucleus	36.28	35.94
AT5G63790.2	Thale cress	cytosol	35.96	35.4
AT3G15510.1	Thale cress	nucleus	38.49	33.52
AT2G43000.1	Thale cress	nucleus	29.02	33.45
AT3G04070.1	Thale cress	nucleus	37.85	33.43
AT2G17040.1	Thale cress	nucleus	24.61	28.26
AT3G12910.1	Thale cress	nucleus	26.81	28.05
AT5G39820.1	Thale cress	nucleus	29.65	27.89
AT1G26870.1	Thale cress	nucleus	30.6	23.21
AT2G02450.2	Thale cress	nucleus	28.71	21.98

Protein Annotations

MapMan:15.5.17	PDB:1UT4	PDB:1UT7	Gene3D:3.30.310.150	PDB:3SWM	PDB:3SWP
PDB:4DUL	EntrezGene:841722	ProteinID:AAG52283.1	ProteinID:AEE32864.1	Symbol:ANAC019	ArrayExpress:AT1G52890
EnsemblPlantsGene:AT1G52890	RefSeq:AT1G52890	TAIR:AT1G52890	RefSeq:AT1G52890-TAIR-G	EnsemblPlants:AT1G52890.1	TAIR:AT1G52890.1
EMBL:AY065268	EMBL:AY117224	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0006950	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009414	GO:GO:0009628	GO:GO:0009987	InterPro:IPR003441	InterPro:IPR036093
InterPro:NAC-dom	InterPro:NAC_dom_sf	RefSeq:NP_175697.1	PFAM:PF02365	PO:PO:0000293	PO:PO:0001078
PO:PO:0001081	PO:PO:0001185	PO:PO:0004507	PO:PO:0007095	PO:PO:0007098	PO:PO:0007103
PO:PO:0007115	PO:PO:0007123	PO:PO:0007611	PO:PO:0007616	PO:PO:0008019	PO:PO:0009009
PO:PO:0009010	PO:PO:0009025	PO:PO:0009029	PO:PO:0009030	PO:PO:0009031	PO:PO:0009032
PO:PO:0009046	PO:PO:0009047	PO:PO:0009052	PO:PO:0025022	PO:PO:0025281	PFscan:PS51005
PANTHER:PTHR44908	UniProt:Q9C932	SUPFAM:SSF101941	UniParc:UPI00000A4B95	SEG:seg	:

Description

NAC019NAC domain-containing protein 19 [Source:UniProtKB/Swiss-Prot;Acc:Q9C932]

Coordinates

chr1:-:19696923..19698482

Molecular Weight (calculated)

35816.6 Da

IEP (calculated)

6.406

GRAVY (calculated)

-0.652

Length

317 amino acids

Sequence
(BLAST)

001: MGIQETDPLT QLSLPPGFRF YPTDEELMVQ YLCRKAAGYD FSLQLIAEID LYKFDPWVLP NKALFGEKEW YFFSPRDRKY PNGSRPNRVA GSGYWKATGT
101: DKIISTEGQR VGIKKALVFY IGKAPKGTKT NWIMHEYRLI EPSRRNGSTK LDDWVLCRIY KKQSSAQKQV YDNGIANARE FSNNGTSSTT SSSSHFEDVL
201: DSFHQEIDNR NFQFSNPNRI SSLRPDLTEQ KTGFHGLADT SNFDWASFAG NVEHNNSVPE LGMSHVVPNL EYNCGYLKTE EEVESSHGFN NSGELAQKGY
301: GVDSFGYSGQ VGGFGFM

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.