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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 4
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY12886 Canola nucleus 94.43 95.02
CDY40970 Canola nucleus 94.43 94.72
Bra027101.1-P Field mustard nucleus 93.19 94.36
AT1G52880.1 Thale cress nucleus 48.61 49.06
AT1G77450.1 Thale cress cytosol, nucleus, plastid 37.15 47.43
AT3G15510.1 Thale cress nucleus 52.01 46.15
AT1G69490.1 Thale cress nucleus 37.46 45.15
AT1G01720.1 Thale cress nucleus 38.39 42.91
AT5G08790.1 Thale cress nucleus 37.15 42.4
TraesCS2D01G214100.1 Wheat nucleus 51.08 41.35
HORVU2Hr1G039640.2 Barley nucleus 51.08 40.74
TraesCS2A01G201800.2 Wheat nucleus 51.08 40.54
TraesCS2B01G228900.1 Wheat nucleus 50.77 40.39
TraesCS6D01G096300.1 Wheat nucleus 51.08 40.15
HORVU6Hr1G019380.2 Barley plastid 50.77 40.0
Os07t0566500-01 Rice nucleus 52.32 39.76
Zm00001d021818_P002 Maize nucleus 51.39 39.62
OQU90111 Sorghum nucleus 50.77 39.23
AT3G15500.1 Thale cress nucleus 38.39 39.12
AT1G52890.1 Thale cress nucleus 38.39 39.12
TraesCS6A01G108300.2 Wheat nucleus 49.85 38.7
AT4G27410.3 Thale cress nucleus 37.15 38.22
AT5G63790.2 Thale cress cytosol 37.46 37.58
AT3G04070.1 Thale cress nucleus 38.39 34.54
AT2G43000.1 Thale cress nucleus 26.93 31.64
AT3G12910.1 Thale cress nucleus 28.17 30.03
AT2G17040.1 Thale cress nucleus 25.39 29.71
AT5G39820.1 Thale cress nucleus 27.86 26.71
AT1G26870.1 Thale cress nucleus 28.17 21.77
AT2G02450.2 Thale cress nucleus 26.63 20.77
Protein Annotations
MapMan:15.5.17Gene3D:3.30.310.150EntrezGene:842404ProteinID:AAB71483.1ProteinID:AEE33783.1EMBL:AK117878
ArrayExpress:AT1G61110EnsemblPlantsGene:AT1G61110RefSeq:AT1G61110TAIR:AT1G61110RefSeq:AT1G61110-TAIR-GEnsemblPlants:AT1G61110.1
TAIR:AT1G61110.1EMBL:AY087839Unigene:At.10430EMBL:BT008346GO:GO:0000003GO:GO:0003674
GO:GO:0003676GO:GO:0003677GO:GO:0003700GO:GO:0005488GO:GO:0005575GO:GO:0005622
GO:GO:0005623GO:GO:0005634GO:GO:0006139GO:GO:0006351GO:GO:0006355GO:GO:0007275
GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009790GO:GO:0009791GO:GO:0009793
GO:GO:0009987InterPro:IPR003441InterPro:IPR036093InterPro:NAC-domInterPro:NAC_dom_sfRefSeq:NP_564771.1
PFAM:PF02365PO:PO:0007611PO:PO:0007616PO:PO:0009030PO:PO:0009031PO:PO:0009032
PO:PO:0009046PO:PO:0025022PO:PO:0025281PFscan:PS51005UniProt:Q8GY42SUPFAM:SSF101941
UniParc:UPI00000ADE36Symbol:anac025SEG:seg:::
Description
NAC025NAC transcription factor 25 [Source:UniProtKB/Swiss-Prot;Acc:Q8GY42]
Coordinates
chr1:+:22516602..22518292
Molecular Weight (calculated)
36314.5 Da
IEP (calculated)
8.137
GRAVY (calculated)
-0.677
Length
323 amino acids
Sequence
(BLAST)
001: MENMGDSSIG PGHPHLPPGF RFHPTDEELV VHYLKKKADS VPLPVSIIAE IDLYKFDPWE LPSKASFGEH EWYFFSPRDR KYPNGVRPNR AATSGYWKAT
101: GTDKPIFTCN SHKVGVKKAL VFYGGKPPKG IKTDWIMHEY RLTDGNLSTA AKPPDLTTTR KNSLRLDDWV LCRIYKKNSS QRPTMERVLL REDLMEGMLS
201: KSSANSSSTS VLDNNDNNNN NNEEHFFDGM VVSSDKRSLC GQYRMGHEAS GSSSFGSFLS SKRFHHTGDL NNDNYNVSFV SMLSEIPQSS GFHANGVMDT
301: TSSLADHGVL RQAFQLPNMN WHS
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.