Factsheet for TraesCS2B01G228900.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

mitochondrion 2
nucleus 3
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, plastid
iPSORT:	mitochondrion
MultiLoc:	nucleus
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G214100.1	Wheat	nucleus	96.55	98.25
TraesCS2A01G201800.2	Wheat	nucleus	97.78	97.54
HORVU6Hr1G019380.2	Barley	plastid	85.47	84.63
CDX82430	Canola	nucleus	34.73	70.85
CDY22671	Canola	nucleus	34.48	70.35
Os07t0566500-01	Rice	nucleus	71.92	68.71
OQU90111	Sorghum	nucleus	69.95	67.94
Zm00001d021818_P002	Maize	nucleus	68.72	66.59
VIT_00s0375g00040.t01	Wine grape	nucleus	44.58	54.68
Bra027101.1-P	Field mustard	nucleus	40.39	51.41
CDY12886	Canola	nucleus	40.64	51.4
CDY40970	Canola	nucleus	40.39	50.93
AT1G61110.1	Thale cress	nucleus	40.39	50.77
Solyc07g063420.2.1	Tomato	nucleus	41.13	50.76
PGSC0003DMT400049664	Potato	nucleus	41.87	50.15
CDY56427	Canola	nucleus	40.15	49.85
AT1G52880.1	Thale cress	nucleus	39.16	49.69
CDY69545	Canola	nucleus	37.93	49.36
KRH22138	Soybean	nucleus	45.32	49.07
CDX97675	Canola	nucleus	41.38	48.98
KRH27199	Soybean	nucleus	45.07	48.8
CDY53806	Canola	nucleus	38.18	48.74
Bra027237.1-P	Field mustard	nucleus	41.87	48.43
GSMUA_Achr9P19520_001	Banana	nucleus	38.42	47.85
CDY20131	Canola	nucleus	41.13	47.71
Bra018997.1-P	Field mustard	nucleus	38.18	47.4
PGSC0003DMT400064428	Potato	nucleus	40.89	47.29
CDX98562	Canola	nucleus	41.63	47.08
Bra021114.1-P	Field mustard	nucleus	41.38	46.93
AT3G15510.1	Thale cress	nucleus	41.87	46.7
Bra001597.1-P	Field mustard	nucleus	39.41	45.71
Solyc10g006880.2.1	Tomato	nucleus	39.9	45.63
GSMUA_Achr1P08860_001	Banana	nucleus	39.41	44.57
TraesCS3B01G439600.1	Wheat	nucleus	30.54	41.61
TraesCS6B01G075200.1	Wheat	nucleus	29.06	41.4
TraesCS3B01G194000.1	Wheat	nucleus	29.8	39.29
TraesCS1B01G274300.1	Wheat	nucleus	28.82	38.87
TraesCS4B01G173600.1	Wheat	nucleus	33.0	38.73
TraesCS5B01G142100.1	Wheat	nucleus	33.0	37.85
TraesCS2B01G119100.1	Wheat	nucleus	33.0	37.64
TraesCS3B01G371200.1	Wheat	nucleus	28.82	37.5
TraesCS2B01G119000.1	Wheat	nucleus	32.27	37.43
TraesCS3B01G093300.1	Wheat	nucleus	32.51	37.39
TraesCS5B01G480900.2	Wheat	nucleus	29.56	36.7
TraesCS4B01G098200.1	Wheat	nucleus	28.82	35.03
TraesCS7B01G472200.1	Wheat	cytosol, nucleus, plastid	20.44	27.95
TraesCS2B01G076000.1	Wheat	nucleus	22.91	27.68
TraesCS7B01G472600.1	Wheat	cytosol, nucleus, plastid	20.2	27.33
TraesCS2B01G076100.1	Wheat	nucleus	23.15	26.7
TraesCS6B01G335700.1	Wheat	nucleus	24.63	25.71
TraesCS5B01G415700.1	Wheat	nucleus	21.92	25.43
TraesCS4B01G384700.1	Wheat	cytoskeleton, cytosol, nucleus	21.18	25.29
TraesCS5B01G338400.1	Wheat	nucleus	23.15	24.67
TraesCS5B01G338700.1	Wheat	nucleus	23.15	24.67
TraesCS5B01G226800.1	Wheat	nucleus	23.89	24.62
TraesCS1B01G272600.1	Wheat	nucleus	23.4	24.55
TraesCS4B01G328800.1	Wheat	nucleus	20.94	24.5
TraesCS5B01G415600.1	Wheat	nucleus	20.94	24.22
TraesCS4B01G328600.1	Wheat	nucleus	20.94	24.22
TraesCS4B01G329100.1	Wheat	nucleus	20.94	24.15
TraesCS2B01G075900.1	Wheat	nucleus	22.91	24.03
TraesCS4B01G328900.1	Wheat	nucleus	20.69	23.86
TraesCS4B01G328700.1	Wheat	nucleus	20.69	23.8
TraesCS5B01G415400.1	Wheat	nucleus	21.92	23.61
TraesCS7B01G219400.1	Wheat	nucleus	21.67	22.62
TraesCS3B01G436900.1	Wheat	nucleus	22.91	22.57

Protein Annotations

MapMan:15.5.17	Gene3D:3.30.310.150	GO:GO:0000003	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	GO:GO:0006139	GO:GO:0006355	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009555	GO:GO:0009791	GO:GO:0009908	GO:GO:0009987	GO:GO:0048653
InterPro:IPR003441	InterPro:IPR036093	InterPro:NAC-dom	InterPro:NAC_dom_sf	PFAM:PF02365	PFscan:PS51005
PANTHER:PTHR45430	PANTHER:PTHR45430:SF1	SUPFAM:SSF101941	EnsemblPlantsGene:TraesCS2B01G228900	EnsemblPlants:TraesCS2B01G228900.1	SEG:seg

Description

No Description!

Coordinates

chr2B:+:223154118..223155624

Molecular Weight (calculated)

43758.2 Da

IEP (calculated)

8.044

GRAVY (calculated)

-0.521

Length

406 amino acids

Sequence
(BLAST)

001: MRSMGSSDSS SGSAPPRHQP PPPQQGSAPE LPPGFRFHPT DEELVVHYLK KKAAKVPLPV TIITEVDLYK FDPWELPEKA TFGEQEWYFF SPRDRKYPNG
101: ARPNRAATSG YWKATGTDKP ILASGCGREK VGVKKALVFY RGKPPKGLKT NWIMHEYRLT DASSSATTSR PPPVTGGSRS ASLRCTSSSH QLDDWVLCRI
201: YKKINKAAAG DQQRSMECED SVEDAVTAYP LYATAGMTGA GAHGSNYDSL LHHQDSHEDN FLDGLLTAED AGLSAGPTSL SHLAAAARAS PAPTKQFLAP
301: SSSTPFNWLD ASTVGILPQA RNFPGFNRSR NVGNMSLSST ADMAVDNGGG NAINTMPPFM NHLPMQDGTY HQQHVILGAP LAPEATAAAT SAFQHPVQIS
401: GVNWNP

Best Arabidopsis Sequence Match ( AT1G61110.1 )
(BLAST)

001: MENMGDSSIG PGHPHLPPGF RFHPTDEELV VHYLKKKADS VPLPVSIIAE IDLYKFDPWE LPSKASFGEH EWYFFSPRDR KYPNGVRPNR AATSGYWKAT
101: GTDKPIFTCN SHKVGVKKAL VFYGGKPPKG IKTDWIMHEY RLTDGNLSTA AKPPDLTTTR KNSLRLDDWV LCRIYKKNSS QRPTMERVLL REDLMEGMLS
201: KSSANSSSTS VLDNNDNNNN NNEEHFFDGM VVSSDKRSLC GQYRMGHEAS GSSSFGSFLS SKRFHHTGDL NNDNYNVSFV SMLSEIPQSS GFHANGVMDT
301: TSSLADHGVL RQAFQLPNMN WHS

Arabidopsis Description

NAC025NAC transcription factor 25 [Source:UniProtKB/Swiss-Prot;Acc:Q8GY42]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.