Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G481200.1 | Wheat | nucleus | 97.86 | 98.46 |
| TraesCS5A01G468300.1 | Wheat | nucleus | 97.86 | 97.86 |
| HORVU5Hr1G111590.2 | Barley | nucleus | 96.33 | 95.45 |
| EER93215 | Sorghum | nucleus | 75.54 | 77.43 |
| Zm00001d034601_P001 | Maize | nucleus | 73.7 | 77.24 |
| Os03t0815100-01 | Rice | nucleus | 73.7 | 76.27 |
| TraesCS6B01G075200.1 | Wheat | nucleus | 54.74 | 62.81 |
| Zm00001d013003_P001 | Maize | nucleus, plastid | 70.34 | 62.67 |
| GSMUA_Achr4P02390_001 | Banana | nucleus | 48.93 | 60.61 |
| GSMUA_Achr5P07590_001 | Banana | nucleus | 51.99 | 58.62 |
| GSMUA_Achr7P21780_001 | Banana | nucleus | 52.6 | 57.72 |
| TraesCS3B01G371200.1 | Wheat | nucleus | 53.82 | 56.41 |
| GSMUA_Achr4P10310_001 | Banana | nucleus | 50.46 | 56.31 |
| VIT_06s0004g00020.t01 | Wine grape | nucleus | 50.46 | 55.56 |
| GSMUA_Achr10P... | Banana | cytosol | 48.01 | 51.64 |
| GSMUA_Achr6P32330_001 | Banana | cytosol | 40.98 | 49.63 |
| TraesCS3B01G439600.1 | Wheat | nucleus | 39.45 | 43.29 |
| TraesCS1B01G274300.1 | Wheat | nucleus | 39.45 | 42.86 |
| TraesCS4B01G098200.1 | Wheat | nucleus | 37.92 | 37.13 |
| TraesCS3B01G194000.1 | Wheat | nucleus | 33.95 | 36.04 |
| TraesCS4B01G173600.1 | Wheat | nucleus | 37.92 | 35.84 |
| TraesCS2B01G119000.1 | Wheat | nucleus | 36.7 | 34.29 |
| TraesCS2B01G119100.1 | Wheat | nucleus | 37.0 | 33.99 |
| TraesCS3B01G093300.1 | Wheat | nucleus | 35.78 | 33.14 |
| TraesCS5B01G142100.1 | Wheat | nucleus | 34.56 | 31.92 |
| TraesCS2B01G228900.1 | Wheat | nucleus | 36.7 | 29.56 |
| TraesCS7B01G472200.1 | Wheat | cytosol, nucleus, plastid | 24.77 | 27.27 |
| TraesCS7B01G472600.1 | Wheat | cytosol, nucleus, plastid | 24.46 | 26.67 |
| TraesCS4B01G384700.1 | Wheat | cytoskeleton, cytosol, nucleus | 26.3 | 25.29 |
| TraesCS5B01G415700.1 | Wheat | nucleus | 26.3 | 24.57 |
| TraesCS5B01G415600.1 | Wheat | nucleus | 26.3 | 24.5 |
| TraesCS4B01G328800.1 | Wheat | nucleus | 25.69 | 24.21 |
| TraesCS4B01G329100.1 | Wheat | nucleus | 25.99 | 24.15 |
| TraesCS4B01G328900.1 | Wheat | nucleus | 25.69 | 23.86 |
| TraesCS2B01G076000.1 | Wheat | nucleus | 24.46 | 23.81 |
| TraesCS4B01G328700.1 | Wheat | nucleus | 25.69 | 23.8 |
| TraesCS6B01G335700.1 | Wheat | nucleus | 28.13 | 23.65 |
| TraesCS4B01G328600.1 | Wheat | nucleus | 25.38 | 23.65 |
| TraesCS2B01G076100.1 | Wheat | nucleus | 25.38 | 23.58 |
| TraesCS1B01G272600.1 | Wheat | nucleus | 27.83 | 23.51 |
| TraesCS7B01G219400.1 | Wheat | nucleus | 26.91 | 22.62 |
| TraesCS5B01G415400.1 | Wheat | nucleus | 25.99 | 22.55 |
| TraesCS3B01G436900.1 | Wheat | nucleus | 27.22 | 21.6 |
| TraesCS5B01G338400.1 | Wheat | nucleus | 25.08 | 21.52 |
| TraesCS5B01G338700.1 | Wheat | nucleus | 24.77 | 21.26 |
| TraesCS5B01G226800.1 | Wheat | nucleus | 25.38 | 21.07 |
| TraesCS2B01G075900.1 | Wheat | nucleus | 24.46 | 20.67 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| InterPro:IPR003441 | InterPro:IPR036093 | InterPro:NAC-dom | InterPro:NAC_dom_sf | PFAM:PF02365 | PFscan:PS51005 |
| PANTHER:PTHR31719 | PANTHER:PTHR31719:SF80 | SUPFAM:SSF101941 | EnsemblPlantsGene:TraesCS5B01G480900 | EnsemblPlants:TraesCS5B01G480900.2 | SEG:seg |
Description
No Description!
Coordinates
chr5B:+:653432486..653433599
Molecular Weight (calculated)
36494.1 Da
IEP (calculated)
6.965
GRAVY (calculated)
-0.648
Length
327 amino acids
Sequence
(BLAST)
(BLAST)
001: MGMPAVRRRE RDAEAELNLP PGFRFHPTDD ELVEHYLCRK AAGQRLPVPI IAEVDLYRFD PWALPDRALF GTREWYFFTP RDRKYPNGSR PNRAAGNGYW
101: KATGADKPVA PRGGRTMGIK KALVFYAGKA PKGVKTDWIM HEYRLADAGR AAASKKGSLR LDDWVLCRLY NKKNEWEKMQ LQQQGGEEMM VEPKAENTAS
201: DMVVTSHSHS QSQSHSHSWG EARTPESEIV DNDPSLFQQA AAFQAQSPAA AAAHQEMMAT LMVPKKEAAE EAGRNDLFVD LSYDDIQSMY NGLDMMPPGD
301: DLLYSSLFAS PRLRGSQPGA GGMPAPF
101: KATGADKPVA PRGGRTMGIK KALVFYAGKA PKGVKTDWIM HEYRLADAGR AAASKKGSLR LDDWVLCRLY NKKNEWEKMQ LQQQGGEEMM VEPKAENTAS
201: DMVVTSHSHS QSQSHSHSWG EARTPESEIV DNDPSLFQQA AAFQAQSPAA AAAHQEMMAT LMVPKKEAAE EAGRNDLFVD LSYDDIQSMY NGLDMMPPGD
301: DLLYSSLFAS PRLRGSQPGA GGMPAPF
001: MSELLQLPPG FRFHPTDEEL VMHYLCRKCA SQSIAVPIIA EIDLYKYDPW ELPGLALYGE KEWYFFSPRD RKYPNGSRPN RSAGSGYWKA TGADKPIGLP
101: KPVGIKKALV FYAGKAPKGE KTNWIMHEYR LADVDRSVRK KKNSLRLDDW VLCRIYNKKG ATERRGPPPP VVYGDEIMEE KPKVTEMVMP PPPQQTSEFA
201: YFDTSDSVPK LHTTDSSCSE QVVSPEFTSE VQSEPKWKDW SAVSNDNNNT LDFGFNYIDA TVDNAFGGGG SSNQMFPLQD MFMYMQKPY
101: KPVGIKKALV FYAGKAPKGE KTNWIMHEYR LADVDRSVRK KKNSLRLDDW VLCRIYNKKG ATERRGPPPP VVYGDEIMEE KPKVTEMVMP PPPQQTSEFA
201: YFDTSDSVPK LHTTDSSCSE QVVSPEFTSE VQSEPKWKDW SAVSNDNNNT LDFGFNYIDA TVDNAFGGGG SSNQMFPLQD MFMYMQKPY
Arabidopsis Description
NAC002ATAF1 [Source:UniProtKB/TrEMBL;Acc:A0A178W8W1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.