Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- nucleus 2
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G078900.1 | Wheat | nucleus | 96.88 | 96.88 |
| TraesCS3A01G078400.1 | Wheat | nucleus | 95.75 | 95.75 |
| HORVU3Hr1G014140.3 | Barley | nucleus | 92.92 | 93.98 |
| GSMUA_Achr7P21770_001 | Banana | nucleus | 33.99 | 60.0 |
| KRH50570 | Soybean | nucleus | 34.28 | 51.93 |
| Os01t0104200-00 | Rice | nucleus | 49.29 | 51.33 |
| Solyc04g005610.2.1 | Tomato | nucleus | 35.13 | 45.09 |
| GSMUA_Achr10P... | Banana | nucleus | 38.53 | 45.03 |
| PGSC0003DMT400007341 | Potato | mitochondrion | 35.98 | 44.88 |
| CDY51500 | Canola | nucleus | 34.56 | 44.85 |
| KRH70773 | Soybean | cytosol | 35.41 | 44.8 |
| KRH74907 | Soybean | nucleus | 35.41 | 44.8 |
| CDY07348 | Canola | nucleus | 34.28 | 44.65 |
| CDY40930 | Canola | cytosol | 33.99 | 44.44 |
| CDX95931 | Canola | cytosol | 33.71 | 44.07 |
| Bra004385.1-P | Field mustard | cytosol | 33.71 | 44.07 |
| AT1G69490.1 | Thale cress | nucleus | 33.43 | 44.03 |
| VIT_01s0026g02710.t01 | Wine grape | nucleus | 35.13 | 43.97 |
| KRG89575 | Soybean | nucleus | 34.84 | 43.93 |
| GSMUA_Achr4P02380_001 | Banana | nucleus | 41.36 | 43.71 |
| PGSC0003DMT400047440 | Potato | nucleus | 34.56 | 43.26 |
| Solyc05g007770.2.1 | Tomato | nucleus | 33.99 | 42.55 |
| TraesCS4B01G173600.1 | Wheat | nucleus | 41.64 | 42.49 |
| Bra003998.1-P | Field mustard | nucleus | 28.61 | 42.26 |
| TraesCS2B01G119000.1 | Wheat | nucleus | 41.64 | 42.0 |
| TraesCS2B01G119100.1 | Wheat | nucleus | 41.93 | 41.57 |
| GSMUA_AchrUn_... | Banana | nucleus | 38.24 | 41.28 |
| GSMUA_Achr6P32320_001 | Banana | nucleus | 39.94 | 40.87 |
| TraesCS3B01G439600.1 | Wheat | nucleus | 33.99 | 40.27 |
| GSMUA_Achr9P04960_001 | Banana | nucleus | 45.04 | 40.05 |
| TraesCS6B01G075200.1 | Wheat | nucleus | 32.01 | 39.65 |
| TraesCS3B01G194000.1 | Wheat | nucleus | 34.28 | 39.29 |
| TraesCS1B01G274300.1 | Wheat | nucleus | 33.14 | 38.87 |
| KXG32136 | Sorghum | plastid | 41.64 | 38.68 |
| GSMUA_Achr3P18010_001 | Banana | nucleus | 39.38 | 37.77 |
| Zm00001d008399_P001 | Maize | nucleus | 42.49 | 37.69 |
| TraesCS5B01G142100.1 | Wheat | nucleus | 37.11 | 37.01 |
| TraesCS5B01G480900.2 | Wheat | nucleus | 33.14 | 35.78 |
| TraesCS4B01G098200.1 | Wheat | nucleus | 33.71 | 35.63 |
| TraesCS3B01G371200.1 | Wheat | nucleus | 31.44 | 35.58 |
| TraesCS2B01G228900.1 | Wheat | nucleus | 37.39 | 32.51 |
| TraesCS7B01G472200.1 | Wheat | cytosol, nucleus, plastid | 22.66 | 26.94 |
| TraesCS7B01G472600.1 | Wheat | cytosol, nucleus, plastid | 22.38 | 26.33 |
| TraesCS2B01G076000.1 | Wheat | nucleus | 24.08 | 25.3 |
| TraesCS5B01G415700.1 | Wheat | nucleus | 24.93 | 25.14 |
| TraesCS5B01G415600.1 | Wheat | nucleus | 24.08 | 24.22 |
| TraesCS2B01G076100.1 | Wheat | nucleus | 24.08 | 24.15 |
| TraesCS4B01G384700.1 | Wheat | cytoskeleton, cytosol, nucleus | 23.23 | 24.12 |
| TraesCS6B01G335700.1 | Wheat | nucleus | 26.06 | 23.65 |
| TraesCS4B01G328600.1 | Wheat | nucleus | 23.23 | 23.36 |
| TraesCS4B01G328800.1 | Wheat | nucleus | 22.95 | 23.34 |
| TraesCS4B01G329100.1 | Wheat | nucleus | 22.95 | 23.01 |
| TraesCS4B01G328700.1 | Wheat | nucleus | 22.95 | 22.95 |
| TraesCS5B01G415400.1 | Wheat | nucleus | 24.36 | 22.81 |
| TraesCS4B01G328900.1 | Wheat | nucleus | 22.66 | 22.73 |
| TraesCS5B01G226800.1 | Wheat | nucleus | 25.21 | 22.59 |
| TraesCS5B01G338700.1 | Wheat | nucleus | 24.36 | 22.57 |
| TraesCS5B01G338400.1 | Wheat | nucleus | 24.36 | 22.57 |
| TraesCS2B01G075900.1 | Wheat | nucleus | 24.65 | 22.48 |
| TraesCS1B01G272600.1 | Wheat | nucleus | 23.23 | 21.19 |
| TraesCS7B01G219400.1 | Wheat | nucleus | 23.23 | 21.08 |
| TraesCS3B01G436900.1 | Wheat | nucleus | 22.66 | 19.42 |
Protein Annotations
| EnsemblPlants:TraesCS3B01G093300.1 | EnsemblPlantsGene:TraesCS3B01G093300 | Gene3D:3.30.310.150 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | InterPro:IPR003441 | InterPro:IPR036093 | InterPro:NAC-dom | InterPro:NAC_dom_sf | PANTHER:PTHR45430 |
| PFAM:PF02365 | PFscan:PS51005 | SEG:seg | SUPFAM:SSF101941 | MapMan:15.5.17 | : |
Description
No Description!
Coordinates
chr3B:-:62313358..62315365
Molecular Weight (calculated)
38753.2 Da
IEP (calculated)
7.790
GRAVY (calculated)
-0.676
Length
353 amino acids
Sequence
(BLAST)
(BLAST)
001: MTIELQSRPS LPAPAGAPPR AGTGLPPGFR FYPTDEELIV HYLRRRAAAA PCPAAVIAEV DIYKLDPWEL PSRAVFEGDN DEWYFFSPRD RKYPNGVRPN
101: RAAGSGYWKA TGTDKPITAG GVPGGEVVGV KKALVFYQGR PPKGLKTNWI MHEYRLADAH AAAVAHTYRP PTRFKASSSM RLDDWVLCRI YKKPNPQQLS
201: PFYEPSPSPS SMDASLGLGH HHHHQYQQQR QQQQEDTSSS SRMLPRNPSI SDYLVDYSAV SELFDSMPPP PQPETTASSA GQFFLGTTTT GAGDGEASTA
301: HKRQATADSN NDGEMSSLHA SKRWLGSDGS MTTMMNGGFS IFGPDQPSQQ DRI
101: RAAGSGYWKA TGTDKPITAG GVPGGEVVGV KKALVFYQGR PPKGLKTNWI MHEYRLADAH AAAVAHTYRP PTRFKASSSM RLDDWVLCRI YKKPNPQQLS
201: PFYEPSPSPS SMDASLGLGH HHHHQYQQQR QQQQEDTSSS SRMLPRNPSI SDYLVDYSAV SELFDSMPPP PQPETTASSA GQFFLGTTTT GAGDGEASTA
301: HKRQATADSN NDGEMSSLHA SKRWLGSDGS MTTMMNGGFS IFGPDQPSQQ DRI
001: MENMGDSSIG PGHPHLPPGF RFHPTDEELV VHYLKKKADS VPLPVSIIAE IDLYKFDPWE LPSKASFGEH EWYFFSPRDR KYPNGVRPNR AATSGYWKAT
101: GTDKPIFTCN SHKVGVKKAL VFYGGKPPKG IKTDWIMHEY RLTDGNLSTA AKPPDLTTTR KNSLRLDDWV LCRIYKKNSS QRPTMERVLL REDLMEGMLS
201: KSSANSSSTS VLDNNDNNNN NNEEHFFDGM VVSSDKRSLC GQYRMGHEAS GSSSFGSFLS SKRFHHTGDL NNDNYNVSFV SMLSEIPQSS GFHANGVMDT
301: TSSLADHGVL RQAFQLPNMN WHS
101: GTDKPIFTCN SHKVGVKKAL VFYGGKPPKG IKTDWIMHEY RLTDGNLSTA AKPPDLTTTR KNSLRLDDWV LCRIYKKNSS QRPTMERVLL REDLMEGMLS
201: KSSANSSSTS VLDNNDNNNN NNEEHFFDGM VVSSDKRSLC GQYRMGHEAS GSSSFGSFLS SKRFHHTGDL NNDNYNVSFV SMLSEIPQSS GFHANGVMDT
301: TSSLADHGVL RQAFQLPNMN WHS
Arabidopsis Description
NAC025NAC transcription factor 25 [Source:UniProtKB/Swiss-Prot;Acc:Q8GY42]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.