Factsheet for VIT_01s0026g02710.t01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH50570	Soybean	nucleus	58.16	70.39
KRH70773	Soybean	cytosol	67.02	67.74
KRH74907	Soybean	nucleus	66.67	67.38
KRG89575	Soybean	nucleus	63.83	64.29
Solyc04g005610.2.1	Tomato	nucleus	62.41	64.0
PGSC0003DMT400007341	Potato	mitochondrion	63.83	63.6
PGSC0003DMT400047440	Potato	nucleus	62.41	62.41
Solyc05g007770.2.1	Tomato	nucleus	61.35	61.35
AT1G69490.1	Thale cress	nucleus	58.16	61.19
CDY40930	Canola	cytosol	58.51	61.11
Bra004385.1-P	Field mustard	cytosol	58.16	60.74
CDX95931	Canola	cytosol	58.16	60.74
CDY51500	Canola	nucleus	57.45	59.56
CDY07348	Canola	nucleus	56.74	59.04
Bra003998.1-P	Field mustard	nucleus	49.29	58.16
GSMUA_Achr7P21770_001	Banana	nucleus	40.78	57.5
HORVU1Hr1G021800.3	Barley	cytosol, nucleus	35.82	54.89
GSMUA_AchrUn_...	Banana	nucleus	48.58	41.9
GSMUA_Achr10P...	Banana	nucleus	44.68	41.72
VIT_00s0375g00040.t01	Wine grape	nucleus	48.23	41.09
GSMUA_Achr4P02380_001	Banana	nucleus	47.87	40.42
GSMUA_Achr6P32320_001	Banana	nucleus	48.94	40.0
VIT_18s0001g02300.t01	Wine grape	nucleus	42.2	39.8
VIT_19s0014g03300.t01	Wine grape	nucleus	49.65	39.66
VIT_08s0040g02110.t01	Wine grape	nucleus	47.52	39.18
TraesCS4B01G173600.1	Wheat	nucleus	47.16	38.44
TraesCS4A01G131000.1	Wheat	nucleus	47.52	37.85
VIT_06s0004g02340.t01	Wine grape	nucleus	24.11	37.78
VIT_07s0031g02610.t01	Wine grape	nucleus	39.36	37.76
TraesCS2D01G101400.1	Wheat	nucleus	47.52	37.75
TraesCS2A01G102000.1	Wheat	nucleus	47.52	37.53
VIT_06s0004g00020.t01	Wine grape	nucleus	39.36	37.37
TraesCS2B01G119100.1	Wheat	nucleus	47.16	37.36
TraesCS4D01G175700.1	Wheat	nucleus	47.16	37.25
HORVU4Hr1G051290.1	Barley	nucleus	46.45	36.9
TraesCS2B01G119000.1	Wheat	nucleus	45.74	36.86
TraesCS2A01G101900.1	Wheat	nucleus	45.39	36.78
VIT_08s0007g07670.t01	Wine grape	nucleus	42.55	35.82
Os01t0104200-00	Rice	nucleus	42.91	35.69
EER92326	Sorghum	nucleus	47.87	35.53
HORVU3Hr1G014140.3	Barley	nucleus	43.62	35.24
TraesCS3B01G093300.1	Wheat	nucleus	43.97	35.13
Zm00001d028999_P001	Maize	nucleus	46.45	35.12
GSMUA_Achr3P18010_001	Banana	nucleus	45.74	35.05
TraesCS3D01G078900.1	Wheat	nucleus	43.62	34.84
VIT_19s0014g03290.t01	Wine grape	nucleus	41.13	34.83
VIT_06s0004g03080.t01	Wine grape	nucleus	44.33	34.72
VIT_19s0027g00880.t01	Wine grape	nucleus	26.24	34.58
TraesCS3A01G078400.1	Wheat	nucleus	43.26	34.56
Os03t0327800-01	Rice	nucleus	47.16	33.93
KXG32136	Sorghum	plastid	45.39	33.68
EER99924	Sorghum	cytosol, nucleus, plastid	45.74	33.25
HORVU2Hr1G017470.1	Barley	nucleus	44.68	32.73
VIT_04s0008g00150.t01	Wine grape	nucleus	32.27	32.62
TraesCS2D01G101300.1	Wheat	nucleus	36.17	32.38
GSMUA_Achr9P04960_001	Banana	nucleus	45.39	32.24
Zm00001d008399_P001	Maize	nucleus	45.39	32.16
VIT_03s0038g03410.t01	Wine grape	nucleus	31.21	31.54
VIT_19s0027g00860.t01	Wine grape	nucleus	29.43	30.07
VIT_19s0027g00870.t01	Wine grape	nucleus	28.72	29.24
VIT_19s0027g00840.t01	Wine grape	nucleus	28.72	28.52
VIT_19s0027g00910.t01	Wine grape	cytoskeleton, cytosol, nucleus	29.43	28.14
Zm00001d022424_P001	Maize	nucleus	32.62	27.88
VIT_12s0028g00860.t01	Wine grape	nucleus	29.43	27.85
VIT_14s0108g00860.t01	Wine grape	nucleus	34.75	27.76
VIT_01s0026g02360.t01	Wine grape	nucleus	34.75	24.44
HORVU0Hr1G026330.2	Barley	nucleus	34.04	23.08
HORVU2Hr1G017460.4	Barley	nucleus	34.04	22.86
VIT_12s0035g02020.t01	Wine grape	nucleus	30.14	18.64

Protein Annotations

MapMan:15.5.17	Gene3D:3.30.310.150	ProteinID:ACX47024	ProteinID:ACX47024.1	ProteinID:CBI31935	ProteinID:CBI31935.3
UniProt:D7TN62	EMBL:FN596002	GO:GO:0000003	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009790	GO:GO:0009791	GO:GO:0009793	GO:GO:0009825	GO:GO:0009835	GO:GO:0009908
GO:GO:0009987	GO:GO:0010150	GO:GO:0016049	GO:GO:0040007	EMBL:GQ369734	InterPro:IPR003441
InterPro:IPR036093	EMBL:KT216259	InterPro:NAC-dom	InterPro:NAC_dom_sf	PFAM:PF02365	PFscan:PS51005
PANTHER:PTHR31989	PANTHER:PTHR31989:SF101	SUPFAM:SSF101941	UniParc:UPI00015CBAD0	ArrayExpress:VIT_01s0026g02710	EnsemblPlantsGene:VIT_01s0026g02710
EnsemblPlants:VIT_01s0026g02710.t01	unigene:Vvi.350	:	:	:	:

Description

NAC transcription factor 29 [Source:UniProtKB/TrEMBL;Acc:D7TN62]

Coordinates

chr1:-:12442003..12443186

Molecular Weight (calculated)

32460.4 Da

IEP (calculated)

8.066

GRAVY (calculated)

-0.741

Length

282 amino acids

Sequence
(BLAST)

001: MDGKGSSQLP PGFRFHPTDE ELIMYYLKNQ ATSKPCPVSI IPEVDIYKFE PWELPEKAEF GENEWYFFSP RDRKYPNGAR PNRATVSGYW KATGTDKAIY
101: SGAKYVGVKK ALVFYKGRPP KGIKTDWIMH EYRLSDSRPR PKKHNGSMRL DDWVLCRIYK KKHVGRILEE KEENLGPQIP VTNSDDGGEQ HQVKFPRTFS
201: LAHLLDMEYL GPISQLLGDN SYHSAFDFQG TISNIAGTDP PGVDKFELFQ LPCQYNDSTK FQVNQNHIPN QPLFVNPVYE FQ

Best Arabidopsis Sequence Match ( AT1G69490.1 )
(BLAST)

001: MEVTSQSTLP PGFRFHPTDE ELIVYYLRNQ TMSKPCPVSI IPEVDIYKFD PWQLPEKTEF GENEWYFFSP RERKYPNGVR PNRAAVSGYW KATGTDKAIH
101: SGSSNVGVKK ALVFYKGRPP KGIKTDWIMH EYRLHDSRKA STKRNGSMRL DEWVLCRIYK KRGASKLLNE QEGFMDEVLM EDETKVVVNE AERRTEEEIM
201: MMTSMKLPRT CSLAHLLEMD YMGPVSHIDN FSQFDHLHQP DSESSWFGDL QFNQDEILNH HRQAMFKF

Arabidopsis Description

NAC029NAP [Source:UniProtKB/TrEMBL;Acc:A0A178W8K0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.